Gchil9127.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9127.t1
Unique NameGchil9127.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length272
Homology
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A2V3IN26_9FLOR (Sodium/pyruvate cotransporter BASS2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN26_9FLOR)

HSP 1 Score: 200 bits (509), Expect = 1.090e-59
Identity = 140/256 (54.69%), Postives = 172/256 (67.19%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGL-LATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLRAVTSHSGAGADVGAKGAAGAANAYRATWATAEHELVTREHDLFCVRVEGGRTKTVPFAGLRSEIARARRSARRVSVWRL 255
            MTTAST+LSA+ALP+LS +L+ QV+YV+  A+AKS+ATLVL+PVL+GA V A F   V +++ +LPLVGI AVLVLILGPVS +A++V E GL  L + VT LH  GG +G  +    LKG RKEA+T AFETGFKSPALSFVLAQRHF + LV +PSVVSIV+LAP AA CAVLLRA+    G     G +       A +            RE  LFCV V G  TK VP   L +E+ RAR+ +  V V RL
Sbjct:   51 MTTASTILSAIALPALSTVLIGQVVYVKTVALAKSLATLVLLPVLIGALVGAKFPGTVKRLENVLPLVGIAAVLVLILGPVSSTAALVGE-GLQSLIVPVTLLHAGGGVVGFAVVRCVLKGSRKEAITAAFETGFKSPALSFVLAQRHFAETLVRMPSVVSIVVLAPFAAGCAVLLRALLGGQGXXXXXGGR------TADKQPTFERYERTAGREATLFCVCVAGIYTKRVPLECLGAELVRARQFSLPVRVTRL 299          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A7J7IG14_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG14_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 5.270e-23
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGA---TVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSK-SASVVTEVGLGRLALAVTALHVLGGALGLLA---TVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MTTA+T+L  VALP +++LLL   + VEA  +A S A +VL+P+ LG    T      D  A++   LP++G+ A L  I+G +S  +A+V++ +G   L LAV   HVLGG LG      T  L G    A T++ ET FKSPALSF+LA +HF  + V VPS +S+V+LAP+AAA AVLLR
Sbjct:   69 MTTATTLLVTVALPLITSLLLGAAVPVEAARLAVSTARVVLLPLALGVMLNTFVLRTSDIRARLAPWLPVLGVAATLFTIVGALSPIAATVLSALGETPLVLAVVGFHVLGGFLGYQVAKMTPGLYGDEAAARTISIETMFKSPALSFILAAKHFDGSWVLVPSAISLVVLAPLAAAYAVLLR 251          
BLAST of Gchil9127.t1 vs. uniprot
Match: M1VC91_CYAM1 (Probable sodium-dependent transporter n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VC91_CYAM1)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-19
Identity = 81/189 (42.86%), Postives = 115/189 (60.85%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGA---TVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSK-SASVVTEVGLGRLALAVTALHVLGGALGLLATVALKG---GRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLRAVTSHS 182
            MTTA+T+L  VALP +++LLL   + V+   +A S A +VL+P+ LG    T      +A +++   LP++G+ A L  I+G +S  SA+V+  +    L LAV   H+ GG LG   +  + G       A T++ ET FKSPALSF+LA +HF  A V VPS +S+V+LAP+AAA AVLLR   S S
Sbjct:  313 MTTATTLLVTVALPLITSLLLGAAVPVDGARLATSTARVVLLPLALGIALNTYVLRTNEARSRLAPWLPVLGVAATLFTIVGALSPVSATVLAALSETPLVLAVAGFHIFGGFLGYYISKRMPGFYGDEATARTISIETMFKSPALSFILAAKHFDGAWVLVPSSISLVVLAPIAAAYAVLLRRSASLS 501          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A1X6P7M2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7M2_PORUM)

HSP 1 Score: 94.4 bits (233), Expect = 2.930e-18
Identity = 74/177 (41.81%), Postives = 102/177 (57.63%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGL-LATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MT  S++L+  A+P LS + L  ++ V++  +A+S AT VL PV  G T  A     V   + LLPLVGI A++++ LG  + +A+ +  +    +A  V   H  G   G  LA   L+ G   A  VAFE GFKSPALS+VLA+RHF D  V   S VSI++LAP+A   AV  R
Sbjct:  272 MTLTSSLLATGAIPLLSRIYLSGLVKVDSAGLARSTATFVLAPVAAGVTAKAVVGPIVTAAEPLLPLVGIAALVIITLGTTAGAAAQIKALWTSAIA-PVVLFHATGFGFGYGLARAVLRTGHPVATAVAFEAGFKSPALSWVLARRHFEDPAVQTASAVSILVLAPMALGAAVAFR 447          
BLAST of Gchil9127.t1 vs. uniprot
Match: M2XXF4_GALSU (Bile acid:Na+ symporter, BASS family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXF4_GALSU)

HSP 1 Score: 89.4 bits (220), Expect = 1.010e-16
Identity = 72/176 (40.91%), Postives = 104/176 (59.09%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MTT ST+ S   LP+LS L L  V+ +    ++KS A +VL P+LLG  + + F   +  ++  LPLVG+ A +  ++G +SK  +++     G L L V  LH +GG  G      L    K   T++ ET FKSPALS+VLA +HF    V +PS VSI++LAP+AA  +V+LR
Sbjct:  223 MTTISTLASVFMLPTLSKLFLGTVIPISVVELSKSTAEVVLAPILLGMFLHSCFPKLMYVLEPALPLVGVVATMYCVVGALSKVQNLILN-SAGVLFLPVMLLHFVGGIAGYYIPKCLGLNEKVCRTLSIETCFKSPALSYVLAIKHFSAFGVRMPSAVSILVLAPLAAFYSVILR 397          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A5J4YYE2_PORPP (Putative sodium/metabolite cotransporter BASS2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYE2_PORPP)

HSP 1 Score: 87.4 bits (215), Expect = 7.450e-16
Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MT+ +T+ S V LP LS  L+  V+ V A  +A+S   +VL P+ +G  +   F   V +V+  LP+VGI A  +++L  V+ S S++    +  + L V  LH  GG  G       K     + T+A ET FKSPALSFVLA+ HF + +VAV S VSI +LAP+ A+ A +LR
Sbjct:  334 MTSLTTLTSVVMLPLLSKALMGTVVAVSAAGIAQSCLQIVLAPIFIGTLLNQLFSATVQRVEPALPVVGIVATSIIVLRAVASSQSLIAS-SMSSVLLPVLLLHFCGGLAGYGVAKLFKQNEATSRTLAIETAFKSPALSFVLAKAHFSE-VVAVASAVSIFVLAPLVASFASVLR 507          
BLAST of Gchil9127.t1 vs. uniprot
Match: I0Z4B5_COCSC (SBF-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z4B5_COCSC)

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-14
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLA 165
            MTTAST+ + +  P L+  L   ++ V+A  +A S   +VL+P +LG      F + V K+K +LPL+G+    +L   P ++ A+++   GL  L++ V  LHV   ++G      +    K   TV+ ETG +S AL F+LAQ HF D LVAVPS VS+V +A
Sbjct:  155 MTTASTLGAIIMTPLLTKTLAGTLVPVDAVGLAMSTFQVVLVPTILGVLTNEFFPNIVKKLKPILPLIGVALTTLLCASPCAQVATILKAQGLD-LSIPVALLHVAAFSMGYFICKGIGFNEKTCRTVSIETGMQSAALGFLLAQTHFTDPLVAVPSAVSVVFMA 318          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A2R6X872_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X872_MARPO)

HSP 1 Score: 81.3 bits (199), Expect = 7.200e-14
Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MTTAST+ + +  P L+ LL  Q++ V+A  +A S   +VL+P ++G      F   V K+  + PL+G+    +L   P+ + + V+   G  +L L V  LH    ALG   +   K G   + T++ E G +S AL F+LAQ+HF + LVAVPS VS+V +A   +A AV  R
Sbjct:  233 MTTASTIGAIIMTPLLTKLLAGQLVPVDAVGLAVSTFQVVLLPTIIGVAAHEFFPKIVEKIIVITPLIGVVLTTLLCASPIGQVSEVLVSQG-AQLILPVAILHAAAFALGYFMSKICKFGETTSRTISIECGMQSSALGFLLAQKHFSNPLVAVPSAVSVVAMALGGSALAVYWR 407          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A1Y1IJH2_KLENI (Bile acid-sodium symporter family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJH2_KLENI)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-13
Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MTTASTV + +  P L+ +L  Q++ V+A  +A S   +VL+P ++G      F    AK+    PL+G+  V +L   P+ + A V+   G   L   V ALH     LG   +     G K + TV+ E G +S AL F+LAQ+HF + LVAVPS VS+V +A   A  AV+ R
Sbjct:  233 MTTASTVAAIMMTPLLTKVLAGQLVPVDAVGLALSTFQVVLLPTVVGVVAHECFPKFTAKISTFTPLIGVILVTLLCASPIGQVADVLMTSG-ASLIWPVLALHTFAYGLGYFLSKIAGFGEKTSRTVSIECGMQSSALGFLLAQKHFSNPLVAVPSAVSVVCMALQGALIAVVWR 407          
BLAST of Gchil9127.t1 vs. uniprot
Match: A0A7J6UZ69_THATH (Bile acid:sodium symporter n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7J6UZ69_THATH)

HSP 1 Score: 77.4 bits (189), Expect = 2.540e-13
Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 0
Query:    1 MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATVAATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAVTALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGDALVAVPSVVSIVLLAPVAAACAVLLR 176
            MTT ST+ + +  P L+ LL  Q++ V+A  +A S   +VL+P ++G      F    +K+  + PL+G+    +L   P+ + A V+   G+ +L L V  LH    ALG L +  L  G   + T++ E G +S AL F+LAQ+HF + LVAVPS VS+V +A   +A AV  R
Sbjct:   40 MTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTIIGVLANEYFPKFTSKIISITPLIGVILTTLLCASPIGQVAEVLKTQGV-QLILPVALLHAAAFALGYLIS-KLSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWR 213          
The following BLAST results are available for this feature:
BLAST of Gchil9127.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN26_9FLOR1.090e-5954.69Sodium/pyruvate cotransporter BASS2, chloroplastic... [more]
A0A7J7IG14_9RHOD5.270e-2346.45Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VC91_CYAM11.230e-1942.86Probable sodium-dependent transporter n=1 Tax=Cyan... [more]
A0A1X6P7M2_PORUM2.930e-1841.81Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2XXF4_GALSU1.010e-1640.91Bile acid:Na+ symporter, BASS family n=1 Tax=Galdi... [more]
A0A5J4YYE2_PORPP7.450e-1640.34Putative sodium/metabolite cotransporter BASS2, ch... [more]
I0Z4B5_COCSC1.200e-1438.18SBF-domain-containing protein n=1 Tax=Coccomyxa su... [more]
A0A2R6X872_MARPO7.200e-1436.93Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A1Y1IJH2_KLENI1.340e-1338.07Bile acid-sodium symporter family protein n=1 Tax=... [more]
A0A7J6UZ69_THATH2.540e-1336.93Bile acid:sodium symporter n=2 Tax=Mesangiospermae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016833Putative sodium bile acid cotransporterPFAMPF13593SBF_likecoord: 3..159
e-value: 3.1E-6
score: 26.7
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 1..181
e-value: 3.9E-28
score: 100.3
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 1..176
NoneNo IPR availablePANTHERPTHR10361:SF62SODIUM/PYRUVATE COTRANSPORTER BASS2, CHLOROPLASTICcoord: 1..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 64..81
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1960275..1961090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9127.t1Gchil9127.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1960275..1961090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9127.t1 ID=Gchil9127.t1|Name=Gchil9127.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=272bp
MTTASTVLSAVALPSLSALLLKQVLYVEAWAMAKSVATLVLIPVLLGATV
AATFKDAVAKVKGLLPLVGIGAVLVLILGPVSKSASVVTEVGLGRLALAV
TALHVLGGALGLLATVALKGGRKEAVTVAFETGFKSPALSFVLAQRHFGD
ALVAVPSVVSIVLLAPVAAACAVLLRAVTSHSGAGADVGAKGAAGAANAY
RATWATAEHELVTREHDLFCVRVEGGRTKTVPFAGLRSEIARARRSARRV
SVWRLGQHPPGDGGRDGDEKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016833Put_Na-Bile_cotransptr
IPR038770Na+/solute_symporter_sf
IPR004710Bilac:Na_transpt