Gchil9105.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9105.t1
Unique NameGchil9105.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length405
Homology
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A2V3IGG8_9FLOR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGG8_9FLOR)

HSP 1 Score: 210 bits (535), Expect = 2.570e-62
Identity = 105/227 (46.26%), Postives = 155/227 (68.28%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNAASG-MFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTHPPSVQVNVNHKSLIGKGSGEEVQLEFKDGFVIVQPYQHVPTREPI 324
            SL+ LV  +  Q +  +LF+L+  KLLRINL       AWIK G  +A QG +  + Q MR+Q L  ++KK ++ EGM L+KC+G+G+V C D+ KL+ ++ L + + LF+NG+++LA+S  L Y    +   + ASG +F +K+ G G +AF   G + TL+A+ E+PVYTDPN+TVAWTH PS ++ ++ KS++G+GSGEEVQ EFK G VIVQP++ VP  EP+
Sbjct:   24 SLSSLVARTRIQPSSQSLFELERSKLLRINLKPKKDNYAWIKLGCIIARQGDLNTSRQSMREQGLGKIVKKAVSGEGMNLIKCKGDGIVFCADDDKLVSLVHLHE-QTLFLNGNDVLALSPSLSYDFALMKGAHIASGSVFNIKVSGTGIMAFTSRGDVVTLEASPENPVYTDPNSTVAWTHQPSTKMALSMKSIVGRGSGEEVQFEFKGGVVIVQPFEEVPVSEPM 249          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A2V3J5K9_9FLOR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K9_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 1.970e-47
Identity = 87/216 (40.28%), Postives = 143/216 (66.20%), Query Frame = 0
Query:  100 LAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFIS-AMNAASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTHPPSVQVNVNHKSLIGKGSGEEVQLEFKDGFVIVQP 314
            L  LV+N+  ++    +F+++ +++L+INLG S    AWIK GT +A +G++KF  QG R+Q    ++KK +T EG+KLV+C+G+G+V C D+ K + V++L   + +++N  N+LA+S  L+Y    +S A  AASG+  +K+ G G ++         + AT + P+Y+ P+ATVAWTH PS  V+++ + L G+ +G+EVQL+F  GFVI+QP
Sbjct:   67 LPTLVENTRAKAKGYPVFEVERDRVLQINLGGSHDSFAWIKAGTVIARRGTVKFTRQGFREQGAGLLVKKAVTGEGLKLVQCKGSGIVYCADDAKAVSVIEL-RKQTIYVNSPNVLALSSSLRYEFKLLSNAGMAASGLLSLKISGLGFLSVTSLKGAIMMTATPDDPLYSKPDATVAWTHHPSFTVDLSPRLLTGRATGQEVQLKFTHGFVIIQP 281          
BLAST of Gchil9105.t1 vs. uniprot
Match: Q12Z16_METBU (DUF124-domain protein n=3 Tax=Methanococcoides TaxID=2225 RepID=Q12Z16_METBU)

HSP 1 Score: 162 bits (410), Expect = 4.000e-44
Identity = 87/231 (37.66%), Postives = 141/231 (61.04%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHVPTREPI 324
            S+ E V  +  +     LF+L+ +++L +NL        W K G+ VA  G++KF  +G+ +  +  +LKK +T EG+ L K EG G V   D  K + ++ L D+E +F+NG++LLA  E + + I  +  +    A G+F VKL G G VA   H    TL+ T+++PV+TDPNATVAW+    P ++ +V+ KS +G+ SGE +Q+ FK +GFV++QPY+ +P ++P+
Sbjct:    5 SIEEFVNETGQKDKGEGLFELERDRMLELNLNGRV----WTKRGSMVAYLGNVKFTREGILEHGVGKLLKKAVTGEGISLTKAEGQGKVYLADAGKKISIINL-DNEAIFVNGNDLLAFEETIGWDIKMMKKVTGIMAGGLFNVKLEGTGMVAITTHYDPVTLKVTKDTPVFTDPNATVAWSGNLSPDLKTDVSLKSFVGRSSGESIQMSFKGEGFVVIQPYEEIPFQQPV 230          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A117K9Y7_9FLAO (Uncharacterized protein n=7 Tax=Chryseobacterium TaxID=59732 RepID=A0A117K9Y7_9FLAO)

HSP 1 Score: 160 bits (405), Expect = 2.120e-43
Identity = 94/229 (41.05%), Postives = 137/229 (59.83%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHVPTRE 322
            SL E V+ +     E   F+L+   LL INL        W K G+ V   G++ F  QGM    L N+LKK L+ EG KL+K EG G +   D  K + +L L ++E LF+NG+++LA  + ++  I  + ++    + G+F VKL G G +A   HG   TL  T ++PV+TDPNATVAW+    P ++ NV+ KSLIG+GSGEE Q++F  +G+V++QPY+ V T E
Sbjct:    5 SLEEFVKETKENPLERDYFELEKPALLEINLNNQA---VWTKTGSMVGYVGNVNFERQGMLSGGLGNLLKKALSGEGAKLMKAEGTGKLYVADSGKKVRILYL-NNETLFVNGNDVLAHEQSVKSDITMLKSIAGMMSGGLFQVKLSGTGHIAITTHGEPLTLMVTPDAPVFTDPNATVAWSGNLSPELKTNVSFKSLIGRGSGEEFQMKFSGNGWVLIQPYEEVYTIE 229          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A399I297_9DELT (Uncharacterized protein n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A399I297_9DELT)

HSP 1 Score: 160 bits (406), Expect = 6.770e-43
Identity = 93/225 (41.33%), Postives = 135/225 (60.00%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTHP--PSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHV 318
            SLAE V+ SA +  +  LF+L+  ++L INL      M W K G+ VA  G+I+F  +G+ D  L N+LKK ++ EG KL K EG G +   D  K + ++QL   E LF+NG++LLA    +   I  + ++    A G+F VKL GKG +A   H    TLQ     PV+TDPNATVAW+    P  + + + K+ IG+GSGE +Q++F+  GFV+VQP++ V
Sbjct:   60 SLAEFVRKSAQKDRKEGLFELESPQMLEINLDG----MVWTKMGSMVAYNGTIRFTREGVLDSGLGNLLKKTVSGEGAKLTKAEGKGALYLADSGKKISIIQL-QGESLFVNGNDLLAFESSITSEITMMKSLAGVLAGGLFNVKLTGKGLIAITTHHDPLTLQVGPNRPVFTDPNATVAWSGSLKPEFKTDTSLKTFIGRGSGESLQMKFQGSGFVVVQPFEEV 279          
BLAST of Gchil9105.t1 vs. uniprot
Match: UPI001E5836AA (AIM24 family protein n=1 Tax=Nostoc sp. CHAB 5715 TaxID=2780400 RepID=UPI001E5836AA)

HSP 1 Score: 159 bits (401), Expect = 8.230e-43
Identity = 95/224 (42.41%), Postives = 139/224 (62.05%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINF---ISAMNAASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQ 316
            SL++ V + A  S  + LF+L+ +++L  NL      M W+K G  VA  G IKF  +GM DQ + N LKK ++ EG  L K EG G +   D  KL+ VL+L ++E +F+NGS+LLA+   L   I     I+AM A+ G+F VK+ G G VAFG HG    L+ +  +PV+TDP ATVAW+    P  + +++ K+ +G+GSGE  Q+ F+ +GFV+VQPY+
Sbjct:    5 SLSQFVADHAEDSTNSGLFELESDRVLECNLNG----MIWMKVGAMVAYTGQIKFTREGMLDQGIGNFLKKAISGEGASLSKAEGRGKLYLADGGKLITVLKL-NNETVFVNGSDLLALESTLSKDITMMRKIAAM-ASGGLFNVKVGGTGMVAFGTHGEPLVLRVSPGNPVFTDPQATVAWSGGLSPEFKTDMSLKTFLGRGSGESFQMMFQGEGFVVVQPYE 222          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A117KB57_9FLAO (Uncharacterized protein n=30 Tax=Flavobacteriales TaxID=200644 RepID=A0A117KB57_9FLAO)

HSP 1 Score: 158 bits (400), Expect = 1.150e-42
Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHV 318
            SL E V+ +     E   F+L+   LL INL        W K G+ V   G++ F  QGM    L N+LKK ++ EG KL+K EG G +   D  K + +L L ++E LF+NG+++LA  + ++  I  + ++    + G+F VKL G G +A   HG   TL  T ++PV+TDPNATVAW+    P ++ NV+ KSLIG+GSGEE Q++F  +G+V++QPY+ V
Sbjct:    5 SLEEFVKETQENPLERDYFELEKPALLEINLNNQA---VWTKTGSMVGYVGNVNFERQGMLSGGLGNLLKKAISGEGAKLMKAEGTGKLYVADSGKKVRILYL-NNETLFVNGNDVLAHEQSIKSDITMLKSIAGMMSGGLFQVKLSGTGHIAITTHGEPLTLMVTPDAPVFTDPNATVAWSGNLSPELKTNVSFKSLIGRGSGEEFQMKFSGNGWVLIQPYEEV 225          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A5P2GGN2_9FLAO (AIM24 family protein n=4 Tax=Weeksellaceae TaxID=2762318 RepID=A0A5P2GGN2_9FLAO)

HSP 1 Score: 158 bits (400), Expect = 1.190e-42
Identity = 91/229 (39.74%), Postives = 140/229 (61.14%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHVPTRE 322
            ++ + ++ +     E+  F+L+  ++L INL        W K G+ VA  G+IKF  +GM    L   LKK LT EG KL+K EG+G +   D  K + +LQ+ D+E + +NG+++LA  + L+  I  + ++    A G+F VKL G G VA   HG   TL  T ++PV+TDPNATVAW+    P ++ NV+ KSL+G+GSGEE Q++F  +G+V++QPY+ V  +E
Sbjct:    5 TIGQFIEKTKQNEAEHDYFELEKPQMLEINLDNQA---VWTKAGSMVAYTGNIKFEREGMLSGGLGKFLKKTLTGEGTKLMKAEGSGRLYVADSGKKVQILQM-DNESICVNGNDVLAHDQSLKSDITMLKSIAGMMAGGIFQVKLSGTGMVAISTHGDPLTLLVTPDNPVFTDPNATVAWSGNLSPELKSNVSFKSLLGRGSGEEFQMKFSGNGWVLIQPYEEVYFQE 229          
BLAST of Gchil9105.t1 vs. uniprot
Match: A0A3L7UY32_9BACT (AIM24 family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7UY32_9BACT)

HSP 1 Score: 158 bits (400), Expect = 2.540e-42
Identity = 94/256 (36.72%), Postives = 144/256 (56.25%), Query Frame = 0
Query:   70 IPVVNNRAMG--PDLGPKHGDSSEKMSDTHRSLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHV 318
            +P     A G  P      G+      D   SL E V+ +  + +    F+L+   +L +NL      M W K G+ +A  G+IKF  +G+ +  L   LKK +T EG KL K EG G +   D  K + +LQL  +E +F+NG++LLA+ E++Q+ IN + ++    A G+F VKL G G +A   H    TL+ T + PV TDPNAT+AW+    P  + +++ K+  G+GSGE +Q+ F+ +GFV+VQPY+ V
Sbjct:    3 LPFAAKSAFGTPPQFSTPRGNPQATRDDQRYSLREFVEETGQKDHGEGFFELESPYMLEVNLNG----MVWTKMGSMIAYVGNIKFVREGILENGLGKFLKKAVTGEGTKLTKAEGQGRLYLADSGKRISILQL-HNESIFVNGNDLLALQEDIQWDINMMYSIAGMMAGGLFNVKLTGTGMIAITSHFQPMTLRVTPDQPVTTDPNATIAWSGNLTPEFKKDISLKTFFGRGSGESIQMFFRGNGFVVVQPYEEV 253          
BLAST of Gchil9105.t1 vs. uniprot
Match: UPI001AEE1BFA (AIM24 family protein n=1 Tax=Bacillus sp. REN3 TaxID=2802440 RepID=UPI001AEE1BFA)

HSP 1 Score: 157 bits (396), Expect = 4.480e-42
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   99 SLAELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGSIKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQLVDSEVLFINGSNLLAMSEELQYSINFISAMNA--ASGMFCVKLCGKGTVAFGCHGAIYTLQATEESPVYTDPNATVAWTH--PPSVQVNVNHKSLIGKGSGEEVQLEFK-DGFVIVQPYQHV 318
            SL E V N+  +     LF+L+  ++L +NL        W K GT ++ +GS+KF  +G+ +  +  M KK LT EG  L+K  GNG +   D+ K++ ++QL   E +F+NG++LLA    + + I  +  +    + G+F V+L G+G VA   H    TLQ T E PVYTDPNATVAW+    P    +++ K+ +G+GSGE +Q++F  +GFV+VQPY+ V
Sbjct:    5 SLEEFVSNTKQEDRGEGLFELETPRMLEVNL----EGRVWAKAGTMISYRGSVKFEREGILEHGVGKMFKKALTGEGTALMKATGNGKLYLADQGKVISIIQL-QGESIFVNGNDLLAFEPSIAWDIKLMKRVAGMLSGGLFNVRLEGRGMVAITSHHKPLTLQVTREEPVYTDPNATVAWSGGLQPEFVTDISLKTFLGRGSGESIQMKFSGEGFVVVQPYEEV 224          
The following BLAST results are available for this feature:
BLAST of Gchil9105.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGG8_9FLOR2.570e-6246.26Altered inheritance of mitochondria protein 24, mi... [more]
A0A2V3J5K9_9FLOR1.970e-4740.28Altered inheritance of mitochondria protein 24, mi... [more]
Q12Z16_METBU4.000e-4437.66DUF124-domain protein n=3 Tax=Methanococcoides Tax... [more]
A0A117K9Y7_9FLAO2.120e-4341.05Uncharacterized protein n=7 Tax=Chryseobacterium T... [more]
A0A399I297_9DELT6.770e-4341.33Uncharacterized protein n=1 Tax=Geobacter sp. TaxI... [more]
UPI001E5836AA8.230e-4342.41AIM24 family protein n=1 Tax=Nostoc sp. CHAB 5715 ... [more]
A0A117KB57_9FLAO1.150e-4240.44Uncharacterized protein n=30 Tax=Flavobacteriales ... [more]
A0A5P2GGN2_9FLAO1.190e-4239.74AIM24 family protein n=4 Tax=Weeksellaceae TaxID=2... [more]
A0A3L7UY32_9BACT2.540e-4236.72AIM24 family protein n=1 Tax=Planctomycetes bacter... [more]
UPI001AEE1BFA4.480e-4238.67AIM24 family protein n=1 Tax=Bacillus sp. REN3 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 105..328
e-value: 1.7E-27
score: 98.2
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 117..314
e-value: 9.9E-20
score: 71.2
NoneNo IPR availablePANTHERPTHR38074FAMILY NOT NAMEDcoord: 99..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..404
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 123..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1900453..1902497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9105.t1Gchil9105.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1900453..1902497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9105.t1 ID=Gchil9105.t1|Name=Gchil9105.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=405bp
MTHVDIKRLKRLASSTLATVSVAAFPNSNMNTESRCPNAIKKFISKATSG
ATPVTDTPVNKTSTAPDQIIPVVNNRAMGPDLGPKHGDSSEKMSDTHRSL
AELVQNSAFQSNENTLFQLQHEKLLRINLGQSTSCMAWIKYGTRVASQGS
IKFNAQGMRDQCLKNMLKKVLTAEGMKLVKCEGNGVVLCGDEMKLLHVLQ
LVDSEVLFINGSNLLAMSEELQYSINFISAMNAASGMFCVKLCGKGTVAF
GCHGAIYTLQATEESPVYTDPNATVAWTHPPSVQVNVNHKSLIGKGSGEE
VQLEFKDGFVIVQPYQHVPTREPITPSLAFRWHLVEKDRPLSQKGIRLVA
KLCLPGVNGPKPLTTRQVFGPAHKGKTPEVLCFRDLTSFLDARPLQHFSF
RALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036983AIM24_sf
IPR002838AIM24
IPR016031Trp_RNA-bd_attenuator-like_dom