Gchil9089.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9089.t1
Unique NameGchil9089.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length448
Homology
The following BLAST results are available for this feature:
BLAST of Gchil9089.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 275..298
e-value: 0.0037
score: 26.5
coord: 334..359
e-value: 3.2
score: 16.7
coord: 379..402
e-value: 0.013
score: 24.7
coord: 303..326
e-value: 2.9
score: 16.9
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 276..298
e-value: 0.011
score: 16.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 305..326
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 336..359
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 277..298
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 275..299
score: 10.761805
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 334..364
score: 8.558796
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 275..326
e-value: 1.3E-7
score: 33.9
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 374..445
e-value: 1.6E-7
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..98
NoneNo IPR availablePANTHERPTHR24388ZINC FINGER PROTEINcoord: 56..433
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 276..324
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 377..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1546995..1548338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9089.t1Gchil9089.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1546995..1548338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9089.t1 ID=Gchil9089.t1|Name=Gchil9089.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=448bp
MCREQRDLNQIKKDIFEVSEDGVFPFENLKDPFEEINLLAGTQNEIPQLH
SSQKRTSNTGQPTELFRDDNDCCQNEDADASPNETHERNDPEINEKNEIE
NNPRHASVRVFYDPLMEKESWAQLDPFFENEQEAFVSAPDLSAFSSQPRR
AAAITIRKEMVPNEKCDSEAINIAEQQNTKDNIAENHSPIRLNSSPVFKM
EEPETTQQSLAEEEIGENNAPVCRAEKVDSSCEGKKGQARGQSENGRETR
IVNRKLKSKIPVPRVFNLLVDIAEIECPTCGKHFGSKLALKRHTERVHTV
GTIPCNFCPQKLKSVTNRVKHERTQHDCSDGERWDCDYDGCSAFFNKSFS
LSMHKRKFHGVKSKATLRKEGQEEDKRVYVCGFCEYSAKTVGNLNRHVFS
RHGAARVTKSGHRFVCEECGGRFTHSTNQRLHECRPIGQDKEIERGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf