Gchil9085.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9085.t1
Unique NameGchil9085.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length147
Homology
[Close]
BLAST of Gchil9085.t1 vs. uniprot
Match: A0A2V3IP17_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP17_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 9.370e-36
Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 0 
Query:   20 SAQTLVQLNPSCSPTKIRADLGCACKLADQLSGAPAGC---TPGSCAPSANARTAIVDLTVIVRSCLLLKPGQLGAVQDPILGDLSNTRSVAANTAKVLGLSLISPSVAPTYRRYVGDVRKARLARFNNL 146
            S  TL+  NP+CS T + +D+ CAC  A  L  APA C   +   C+ + ++R+ +V LT+IVR+CL+LKPGQ+G   DP+LG+L+  R + A  A V+   L+ PSVAPTYRR VGDVRK RLAR+N +
Sbjct:   19 SGSTLIVFNPTCSATSVLSDVKCACSYASSLGAAPAECPAFSASDCSGAVSSRSILVKLTIIVRTCLVLKPGQIGDNMDPVLGNLTALRRLVAKLALVVTRGLVKPSVAPTYRRMVGDVRKERLARYNRV 148
The following BLAST results are available for this feature:
BLAST of Gchil9085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IP17_9FLOR9.370e-3649.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1481321..1481761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9085.t1Gchil9085.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1481321..1481761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9085.t1 ID=Gchil9085.t1|Name=Gchil9085.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=147bp
MSHHSFLALTFLACVFVAVSAQTLVQLNPSCSPTKIRADLGCACKLADQL
SGAPAGCTPGSCAPSANARTAIVDLTVIVRSCLLLKPGQLGAVQDPILGD
LSNTRSVAANTAKVLGLSLISPSVAPTYRRYVGDVRKARLARFNNL*
back to top