Gchil9073.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9073.t1
Unique NameGchil9073.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length645
Homology
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BLAST of Gchil9073.t1 vs. uniprot
Match: A0A2V3IYQ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYQ3_9FLOR)

HSP 1 Score: 520 bits (1338), Expect = 5.350e-175
Identity = 299/645 (46.36%), Postives = 396/645 (61.40%), Query Frame = 0 
Query:    9 ISISLLLAAAFPHHANAQEKEPQKVIIESNESWQSGVVLVYSTIILIGLRLSATIRHSPLSPIRNTARIYYYATASLVVGLLSTLILLLLSTFPATRDVAGQLMPCASPLLALGGVLTLMPQVVAPQMDAQPIVSIMGVSRFATFFAAAVLNAMTIAASVLNGAWAATSISLATTLIALFGPRTPVVDNTVANGIVEPGGPVFLRVCQLPPDRVITLSFTPDGKNVREFSGKGWLKLQTDDEFSHDGRVRIGAYPRVRVVVVNEEEMNAPLLDVADFDSVQLISGEDCEKIVGYLPLETWMNSPFGDDVEKIRICMNEFYSMVLGAVVCSACEPGAEND-FPGASFVYGRMVRRMLSPVSTPDEAALGLPLGTIGLSTSITDQLGAYEKKIERIEHVTATMTQPHCNIMRIVLMVIWSWFHEVHDERVLILTLDAVARLLHGMCRTDDDCYVKVEELCVVFEGMDDIFYEPGVEVYDKNE-LHAVVTDKQSRCVHWISRREKQTLEKYIRTKTHAVICSQSQRNELNRDFNDSQSKAYVEAITV-------ERVGEDILRVLNSAVKGEKIRTWSNAERDLTFEEWNESRQRNPQRVWPANWRNDYVEAASVVASVKGMAEIASLQAINSGIAAGSVLFGRLLGA 644
            ++I +LL A+    A  Q+   QKVIIE+NE+WQSG+VL+YS +ILI LRLS+TI HSPLSP+R   R+YYYA A+L  GL STL L+ LS F  TRDVA  LMPCASPLLALGG L L+PQ  APQMDAQPI ++MG+S +  F AA +LNA+TIAAS +N                                                 DRVITLS T    +VREF G GW KL  + E SH+G +RIGA P V  VVVNEE +   LL     ++VQLISG     +VGYLPL  W+N+PFGD+V  +RI M EF+  +L   + SA    +E + FPGA   +G +V ++L PV  P+ AALGL +G I L   +  QL  Y+ K+ RI+ +T  + QPHCNI+RI+L VI S  + VH+  ++ L L  +AR+L+  CR   D  + V+ELCVVF+G+ ++ ++    + + +  LHA+VTD +   VHWI   EK +LE Y+  K+HA+I  +   N +     ++    ++EAIT+       E +  + LR+  + +  +  +TW N E  +T  EWNESR+RN  RVWP NW +D  E ASVVA+VKG+AEIASLQAI SGIAAGSVLFGRLLGA
Sbjct:    4 LTIQILLLASLLQKARPQDDPAQKVIIEANETWQSGLVLIYSAVILIALRLSSTIHHSPLSPLRGILRVYYYAAAALAAGLASTLTLVFLSIFDTTRDVARDLMPCASPLLALGGFLVLLPQSRAPQMDAQPIAAVMGISYWVAFLAAVLLNALTIAASTIN-------------------------------------------------DRVITLSLTSSRTSVREFIGSGWAKLPPEKELSHEGCLRIGARPVVSAVVVNEENLEMHLLLEEKHNTVQLISGTT-GNVVGYLPLADWLNNPFGDEVASVRIRMTEFFQEILRRSIWSASRADSEVEWFPGAYLTFGSIVHQLLLPVPPPNHAALGLTIGVIDLGQDMYSQLNDYQNKLIRIDRITTGLPQPHCNIIRILLKVICSHLYAVHETSIVDLALHIIARVLNTHCRGQHDD-INVQELCVVFDGIHEVLFDAEDHMGEPHRRLHALVTDIEQERVHWIFENEKASLESYLSKKSHAIIADEHNSNVMKDRSAETNLLPHLEAITLSTEQTGAEGIRGNTLRLHRTIIPEQDAKTWGNDEHVITESEWNESRRRNMVRVWPVNWDSDMSETASVVATVKGIAEIASLQAITSGIAAGSVLFGRLLGA 597
The following BLAST results are available for this feature:
BLAST of Gchil9073.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYQ3_9FLOR5.350e-17546.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..644
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availableTMHMMTMhelixcoord: 43..62
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 4..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1350704..1352638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9073.t1Gchil9073.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1350704..1352638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9073.t1 ID=Gchil9073.t1|Name=Gchil9073.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=645bp
MLQTTFIGISISLLLAAAFPHHANAQEKEPQKVIIESNESWQSGVVLVYS
TIILIGLRLSATIRHSPLSPIRNTARIYYYATASLVVGLLSTLILLLLST
FPATRDVAGQLMPCASPLLALGGVLTLMPQVVAPQMDAQPIVSIMGVSRF
ATFFAAAVLNAMTIAASVLNGAWAATSISLATTLIALFGPRTPVVDNTVA
NGIVEPGGPVFLRVCQLPPDRVITLSFTPDGKNVREFSGKGWLKLQTDDE
FSHDGRVRIGAYPRVRVVVVNEEEMNAPLLDVADFDSVQLISGEDCEKIV
GYLPLETWMNSPFGDDVEKIRICMNEFYSMVLGAVVCSACEPGAENDFPG
ASFVYGRMVRRMLSPVSTPDEAALGLPLGTIGLSTSITDQLGAYEKKIER
IEHVTATMTQPHCNIMRIVLMVIWSWFHEVHDERVLILTLDAVARLLHGM
CRTDDDCYVKVEELCVVFEGMDDIFYEPGVEVYDKNELHAVVTDKQSRCV
HWISRREKQTLEKYIRTKTHAVICSQSQRNELNRDFNDSQSKAYVEAITV
ERVGEDILRVLNSAVKGEKIRTWSNAERDLTFEEWNESRQRNPQRVWPAN
WRNDYVEAASVVASVKGMAEIASLQAINSGIAAGSVLFGRLLGA*
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