Gchil9072.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9072.t1
Unique Name	Gchil9072.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	193

Homology

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BLAST of Gchil9072.t1 vs. uniprot
Match: A0A2V3IZU4_9FLOR (NAM-associated domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU4_9FLOR)

HSP 1 Score: 88.6 bits (218), Expect = 2.750e-18
Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 0

Query:   13 LIAMAIGLFNGLEISKAQEDCEKTFRFFSAWEVLLHHEKF---------SAALKP---------SISRTESDKEAVNFDNSGTNTEPILHIE-------RPIGRSRAKDALEKKKNSEEQLRLAAKASATQMERNKTLKRHYEIMLFTNASAGCDESETVEYFSFMRAWAFFNLR 162
            ++ +A    NG E   A +DC K FRF +A +VL +++KF            +K          S S   SD    + + + T+T   L+I        RP+GR  AK    ++K +E +LR AA++    +ERN+ LKR+YEIML T+A  GCD S+ +EYF  MRA A   LR
Sbjct:    1 MVQLASAFLNGRERRDALDDCGKPFRFVAASKVLKNNDKFRNVTVEQRDEGGIKSVEMGIHKFSSHSNLGSDNMCEDANLNTTDTGSDLNISPPKKPTGRPVGRKHAKVERSREKYNETKLRFAAQSMEAVVERNRLLKRNYEIMLLTSAPDGCDISDLLEYFKIMRAHALEELR 175

[Close]

BLAST of Gchil9072.t1 vs. uniprot
Match: A0A2V3IR86_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR86_9FLOR)

HSP 1 Score: 65.9 bits (159), Expect = 7.100e-10
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0

Query:   73 DNSGTNTEPILHIERPIGRSRAKDALEKKKNSEEQLRLAAKASATQMERNKTLKRHYEIMLFTNASAGCDESETVEYFSFMRAWAFFNLRGEKKHKKK 170
            ++ G  T       RP+GR +A + L K++ + ++L++AAKA   Q +RN  L R  EI+LF+NAS G +E ET+EYF   R  A  N R  +K  +K
Sbjct:    2 ESKGAVTTEYSSSGRPLGRHKATEKLSKQEATGKKLKIAAKAVELQRQRNAALDRQNEILLFSNASKGVNEDETLEYFRLGRQEAIVNARRRQKELEK 99

The following BLAST results are available for this feature:

BLAST of Gchil9072.t1 vs. uniprot

BLAST of Gchil9072.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IZU4_9FLOR	2.750e-18	36.00	NAM-associated domain-containing protein n=1 Tax=G...	[more]
A0A2V3IR86_9FLOR	7.100e-10	39.80	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..192

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:1345527..1346105 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9072.t1	Gchil9072.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 1345527..1346105 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9072.t1 ID=Gchil9072.t1|Name=Gchil9072.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=193bp
MCAKSSGVSVKDLIAMAIGLFNGLEISKAQEDCEKTFRFFSAWEVLLHHE
KFSAALKPSISRTESDKEAVNFDNSGTNTEPILHIERPIGRSRAKDALEK
KKNSEEQLRLAAKASATQMERNKTLKRHYEIMLFTNASAGCDESETVEYF
SFMRAWAFFNLRGEKKHKKKNSHSSKESKESVRDGDDDSSEN*