Gchil9059.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9059.t1
Unique NameGchil9059.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length341
Homology
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A2V3IWT0_9FLOR (PiRNA biogenesis protein EXD1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWT0_9FLOR)

HSP 1 Score: 443 bits (1139), Expect = 1.900e-153
Identity = 229/340 (67.35%), Postives = 271/340 (79.71%), Query Frame = 0
Query:    1 MSASRYELPSAAYVPLSERGAFAPPERPRRRHDAVAPTNRPKFPAPRRQSRTKPRRSPHPDRPDALQLRYVTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDEHGPKKAQRQYEQMARVARRERLAFDTVKRIEKVQAADPLRNFTFDRSLVVQVMQG 340
            MS SRYE+P ++Y  L  R A    ++P+R  D  A T R   P+ RRQSR KPR  P   R     L YVT++ ECA A+  LS F R+AVDCEGVALSRTGRLCLLQ+ASP+H+++ DLV  +P HA  MF+QGGLK LL+N  VYKV+HDCR+DSDALYHQFGVKL  VIDTQVVFAVLR  RGMP+GLPVSLKTLLKKFTS TE +L MKNAIKTSM+GDDDFW RRPLS +ALQYARLDV+HLLSIT+ LS+YI +AD NAW +VL +SQF+++VFRDDEHGP+KAQ+QYE MAR+ARR+RLAF   KRIEK++A DPLR+FTFDRSLVVQ+M  
Sbjct:    1 MSTSRYEIPKSSYTALPHRRAGTSAKKPKRNSDVFASTPRTLRPSGRRQSRQKPR-YPDQTRRHPPPLTYVTTLEECARAVSSLSEFNRIAVDCEGVALSRTGRLCLLQLASPNHLYLIDLVRDEPDHARAMFEQGGLKHLLQNPKVYKVIHDCRHDSDALYHQFGVKLAAVIDTQVVFAVLRKARGMPEGLPVSLKTLLKKFTSATEDELGMKNAIKTSMQGDDDFWLRRPLSQEALQYARLDVEHLLSITSTLSRYIRTADPNAWKIVLKRSQFHVTVFRDDEHGPRKAQQQYEHMARIARRQRLAFTAEKRIEKLRATDPLRSFTFDRSLVVQLMHA 339          
BLAST of Gchil9059.t1 vs. uniprot
Match: R7QTP1_CHOCR (3'-5' exonuclease domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTP1_CHOCR)

HSP 1 Score: 301 bits (772), Expect = 6.420e-97
Identity = 149/268 (55.60%), Postives = 198/268 (73.88%), Query Frame = 0
Query:   71 VTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDEHGPKKAQRQYEQMARVARRERLAFDTVKRIEKVQAADPLRNFTFDRSLVVQVM 338
            V+SV EC   +  LS F RVAVDCEGVALSR G+LCL+QVAS   +F FD+V  +  H   +F++GGL++LLEN  V KVMHDCR+DSDAL+HQFGV+LGPV+DTQVVF+ LR  RGM +GLPVS++TLLKKFT  +E+DL +K A++  M GD + W RRPL  +A+QYAR+DV+HLL +  LL  Y+  AD+ AW  V  +S  Y+ V+RDDE GP+KAQ +Y++MAR+ARR+R   D  K+++  Q  DP+R F+FD   VV+ +
Sbjct:  134 VSSVEECRRVVTRLSRFDRVAVDCEGVALSRKGKLCLVQVASVDGIFFFDVVDEK--HGRQIFEEGGLRRLLENDRVSKVMHDCRHDSDALFHQFGVRLGPVVDTQVVFSELRKARGMEEGLPVSMRTLLKKFTGASEEDLVVKVAVRDQMSGDKELWQRRPLGEKAMQYARIDVEHLLFLEELLRGYLFDADRKAWETVREKSTEYVMVYRDDEDGPRKAQVRYDEMARMARRQRSKADKQKKMDMHQRTDPMRKFSFDAPKVVEAL 399          
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A7S3EQ64_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ64_9RHOD)

HSP 1 Score: 174 bits (440), Expect = 1.620e-48
Identity = 96/238 (40.34%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   71 VTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDEHGPKKAQRQYEQMARVARRERLA 308
            V ++ +   A   L     +A+DCEG ALSRTGRLCL+Q+AS    ++FD++    A    +F  GG+  LLE+  + KV+HDCR DSDALY QF VKL  V DTQV +   R  +G+   +PV LKTLL+ F+  T ++  +K +IK+  + +   W +RPL  +A+ YA+ D++HLL++ N   KY+      A   V  ++  YL  FR DE GP KA+ ++ +M    + ER A
Sbjct:    3 VDTLIKAKSASAALMTEMVLALDCEGTALSRTGRLCLVQIASRKKAYLFDVI----AIGGELFTAGGIGPLLESETIVKVVHDCRQDSDALYWQFNVKLANVFDTQVAYTAWREQKGIETTIPVGLKTLLRTFSVTTVEEENLKASIKSQFQDNPKLWEQRPLPTEAITYAKFDIEHLLNVYNQFKKYLQP---EANEKVNARTLEYLDEFRMDEQGPAKARARFTKMVEKVQEEREA 233          
BLAST of Gchil9059.t1 vs. uniprot
Match: M2XBK0_GALSU (3'-5' exonuclease domain-containing protein / KH domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XBK0_GALSU)

HSP 1 Score: 157 bits (396), Expect = 2.660e-42
Identity = 91/220 (41.36%), Postives = 132/220 (60.00%), Query Frame = 0
Query:   82 QVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTS--VTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSI-TNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDEHGPKKAQRQYEQM 298
            + L     +AVDCEGV LSR G+LCLLQV++    F+FD+ + Q    + +F  G  K++LE+  + KV HDCR DSDAL+  +GV+L  V+DTQV F +LR  +G  + LPV   TLL++F +  ++ Q L +K   K     D +FW RRP+   AL YA  DV+ LL I TN+L        K     V+++S+ Y+  +RDDE G  KA+ ++ Q+
Sbjct:   24 ETLGVCDAIAVDCEGVNLSRDGKLCLLQVSTGTKTFIFDVCALQ----KELFLTG-FKEILESERILKVFHDCRYDSDALWWLYGVRLRNVLDTQVAFRILREQQGYTRQLPVKFITLLRRFVNQEISPQTLELKRTFKNRFSQDRNFWLRRPIPKDALVYAAYDVKKLLEIATNILRNLSEWNRKR----VMDESEIYVMAYRDDEEGALKARMEFGQI 234          
BLAST of Gchil9059.t1 vs. uniprot
Match: L8GZC6_ACACA (3'5' exonuclease domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZC6_ACACA)

HSP 1 Score: 127 bits (318), Expect = 5.060e-29
Identity = 78/256 (30.47%), Postives = 124/256 (48.44%), Query Frame = 0
Query:   71 VTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTS-------VTEQDL----------------------------------CMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDE 285
            V+ + EC + +  L+  + +AVDCEGV LSR G LCL+Q+ +   V++ D++     H   +F++GGL+ LLE+  V KV+HDCR DSDA+YHQ+GV L  V DTQ+ +AV++   G    LPV L T+L+ + +         EQ+                                     K   +  M  D  +W  RPL+   + YA  DV  L  +   +  ++++ ++    +    S  Y++  RD E
Sbjct:  165 VSQIEECREMVAELTKLEVIAVDCEGVNLSREGELCLVQIGTESKVYLVDVLE----HGRALFEEGGLRALLESTKVRKVLHDCRGDSDAMYHQYGVALQNVFDTQIAYAVIKRQMGQGTPLPVGLNTVLRAYATPILETKAAQEQEKERAERKKQQQASGDKSAADAPFALDLVRRIDAINSFKKEERLKMVEDPTYWKTRPLTSSMVGYASEDVMFLCLVYKQMHGFLNAHNRK---IAFEYSAKYVAQVRDLE 413          
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A6B2L826_9EUKA (3'-5' exonuclease domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L826_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 6.280e-29
Identity = 74/218 (33.94%), Postives = 123/218 (56.42%), Query Frame = 0
Query:   70 YVTSVAECADAMQVLSAFKRVAVDCEGVA---LSRTGRLCLLQVASPHH-VFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRD 283
            ++ ++ +C  A+  LS  K +AVDCE      + RT  LCLLQ+A+P    ++FD++    A  +++F +GGLK+LLEN+++ K+ HDCR D+D L++Q  V++  V DTQ+ +A  R  +     LPV LK LLK+F          K   +  M+  +D+W  RP++   L YAR DV  L  +   ++    ++ +    + +  S+ YL++ RD
Sbjct:   92 FIDTIDKCKVAVAELSKQKMIAVDCEWAGSRDVPRTQELCLLQIANPFKKAYLFDVL----AVGKDLFDKGGLKELLENKNIMKIFHDCRWDADILWNQMNVRVENVFDTQIGYACYRRQQESMTPLPVGLKNLLKRFALGGTHT--SKEEARQGMEDREDYWKIRPMTEVMLNYAREDVLLLPLVYRQINAIFSTSSRT---VAMEHSKLYLNMRRD 300          
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A1Y1I9J8_KLENI (Ribonuclease H-like domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9J8_KLENI)

HSP 1 Score: 125 bits (313), Expect = 5.860e-28
Identity = 88/230 (38.26%), Postives = 123/230 (53.48%), Query Frame = 0
Query:   67 QLRYVTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASP---HHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVL---------RTVRGMPQGLPVSLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDD 284
            Q+  +T       A+Q ++    +A+DCEG  LSRTGRLCL+QVA P   H V++FDLVS      E + Q  G   +LE+R V KV+HDCR DSDAL+HQ G++L  V DTQ  +  L          T R +P  LP  L  LLK++T    ++   K   K  M+ D   W +RPLS   LQYA  DV  L ++ + +   +  + K A   +   S  Y+  FR++
Sbjct:  208 QVLVITDKEALGAAVQSIAQHSTIAIDCEGCNLSRTGRLCLVQVALPPPKHCVYLFDLVSMDSDTLEALKQSLGT--ILEDRSVTKVIHDCRQDSDALFHQLGIRLDGVFDTQASYVALVKVLKAQACSTSRFVP--LP-GLNQLLKEYTG---KENSAKQDGKVLMERDPSIWEKRPLSFVLLQYAAQDVMGLFAVQDGI---LRDSSKLALAQLSLASAQYVGAFRNN 426          
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A485L5N6_9STRA (Aste57867_15282 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.150e-24
Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 0
Query:   66 LQLRYVTSVAECADAMQVLSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAV--LRTVRGMPQG---LPVSLKT----------------LLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHL 248
            +Q+  V S  E   A+ V+     V VDCEGVALSRTGR+C++ VA   HV++FD++ + PA  E       LK +LE+    KV+HDCR DSDAL+HQFG+ L  V DTQV  A+  L+ ++ + +G   + VS ++                LL ++ S+ E D   K  +K SM   +  W  RPLS Q   YA +DV +L
Sbjct:  554 VQISTVASSTEAQAALSVVRQHSCVGVDCEGVALSRTGRICVISVAVGFHVYLFDVMVA-PALTEM------LKPMLEDTATLKVLHDCRKDSDALFHQFGISLANVFDTQVGHAIGQLQRIKKVKEGTKCMQVSAESVVSLGNAHHECLAFGDLLWQYLSIHEDD---KADVKKSMT--EATWTVRPLSTQLQHYAAVDVVYL 745          
BLAST of Gchil9059.t1 vs. uniprot
Match: UPI0015AD3422 (egalitarian protein homolog n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AD3422)

HSP 1 Score: 114 bits (286), Expect = 2.020e-24
Identity = 75/192 (39.06%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   67 QLRYVTSVAECADAMQVLSAFKR--VAVDCEGVALSRTGRLCLLQVAS-PHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPV------SLKTLLKKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLL 249
            +++ VT   EC+  ++ + + K   ++ D EGV L  +G + LLQ A+   H+F+FDL+S        + + GGLK +LE++DV KV HDCRNDS ALYHQFGV L  V DTQ   AVL+       G PV      SL TL   +          K+ +K+  + D  FW RRPL+   + +A  DV  LL
Sbjct:  361 KVKIVTKTKECSSVVKYILSLKDPVISFDGEGVNLGPSGPMTLLQFATLDEHIFLFDLLS-----CPQLMEDGGLKDVLESQDVLKVAHDCRNDSGALYHQFGVILANVFDTQAAHAVLQQ---QDAGKPVYKVKNVSLNTLCSTYGGPVNP---RKDQMKSLYRRDQKFWSRRPLTDDMIFHAAFDVFCLL 541          
BLAST of Gchil9059.t1 vs. uniprot
Match: A0A2D8QN62_9GAMM (3'-5' exonuclease domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D8QN62_9GAMM)

HSP 1 Score: 112 bits (280), Expect = 2.390e-24
Identity = 73/215 (33.95%), Postives = 125/215 (58.14%), Query Frame = 0
Query:   84 LSAFKRVAVDCEGVALSRTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKVMHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRG-MPQGLPVSLKTLLKKFTSVTEQDLC--MKNAIK---TSMKGDDDFWYRRPLSPQALQYARLDVQHLLSITNLL------SKYIHSADKNAW-PLVLNQSQFYLSVFRDDE 285
            L   K +A DCEGV LSRTG++ LLQ+A P  +F+ D+++   A  + +F +GGLK+++++ ++ K+ +D R DSDAL+HQ  V L  V+D Q++   +R   G + + LP   KT+ ++ T+  E  +C  +K  +K   TS++ D D W RRPL+  A +YA LD   L+ + + +      + ++      +W   VL+ S+  +  ++D E
Sbjct:  179 LKQSKVIAYDCEGVRLSRTGKITLLQIAIPEKIFLIDVMT---AGGKEIFVEGGLKEIIQSEEILKLAYDVRMDSDALFHQHDVLLKNVLDLQLLDIAIRRAAGTLVEYLPSLSKTVNRRLTNA-EILVCEDLKKRVKNMYTSIE-DGDLWARRPLTDDARRYAALDAWILMKLNHAMRPNGTTASHLFPGFDESWNERVLDASRKRIDEYKDKE 388          
The following BLAST results are available for this feature:
BLAST of Gchil9059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWT0_9FLOR1.900e-15367.35PiRNA biogenesis protein EXD1 n=1 Tax=Gracilariops... [more]
R7QTP1_CHOCR6.420e-9755.603'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A7S3EQ64_9RHOD1.620e-4840.34Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2XBK0_GALSU2.660e-4241.363'-5' exonuclease domain-containing protein / KH d... [more]
L8GZC6_ACACA5.060e-2930.473'5' exonuclease domain containing protein n=1 Tax... [more]
A0A6B2L826_9EUKA6.280e-2933.943'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1Y1I9J8_KLENI5.860e-2838.26Ribonuclease H-like domain containing protein n=1 ... [more]
A0A485L5N6_9STRA1.150e-2439.22Aste57867_15282 protein n=1 Tax=Aphanomyces stella... [more]
UPI0015AD34222.020e-2439.06egalitarian protein homolog n=1 Tax=Stegodyphus du... [more]
A0A2D8QN62_9GAMM2.390e-2433.953'-5' exonuclease domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 68..260
e-value: 3.2E-16
score: 69.9
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 69..257
e-value: 3.1E-27
score: 95.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 17..302
e-value: 8.9E-47
score: 161.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..64
NoneNo IPR availablePANTHERPTHR46628PIRNA BIOGENESIS PROTEIN EXD1coord: 75..293
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 59..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1256472..1257494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9059.t1Gchil9059.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1256472..1257494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9059.t1 ID=Gchil9059.t1|Name=Gchil9059.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=341bp
MSASRYELPSAAYVPLSERGAFAPPERPRRRHDAVAPTNRPKFPAPRRQS
RTKPRRSPHPDRPDALQLRYVTSVAECADAMQVLSAFKRVAVDCEGVALS
RTGRLCLLQVASPHHVFVFDLVSSQPAHAENMFQQGGLKQLLENRDVYKV
MHDCRNDSDALYHQFGVKLGPVIDTQVVFAVLRTVRGMPQGLPVSLKTLL
KKFTSVTEQDLCMKNAIKTSMKGDDDFWYRRPLSPQALQYARLDVQHLLS
ITNLLSKYIHSADKNAWPLVLNQSQFYLSVFRDDEHGPKKAQRQYEQMAR
VARRERLAFDTVKRIEKVQAADPLRNFTFDRSLVVQVMQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf