Gchil9052.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9052.t1
Unique NameGchil9052.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length992
Homology
BLAST of Gchil9052.t1 vs. uniprot
Match: A0A2V3IJY9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJY9_9FLOR)

HSP 1 Score: 1122 bits (2902), Expect = 0.000e+0
Identity = 576/876 (65.75%), Postives = 678/876 (77.40%), Query Frame = 0
Query:  124 MTRKRPAAPVSETPKRARCGRRPDVKQDAFPPWLQDAAAAFINTTPPLSWAGGFYSWGTWLNALRDQSLWASNHENKPPWRQLVDVCRNSGQVCGTAALYRAKNDLVSAIINLVYRRGETQRLTMARQKPAVERDIMRRVRAVVTRQRRHEAASLTFIRYLDLAFVFSAYKDCRLAQEAKESESFARINTQVEDELNFLQAKPNAKQIGAVTQRMEAYMWQHRWLPWYEQMPHMKDKMLISAREAARAFCNGLPCPKFGVGTGVRGLSRDHLAGAGIMDEWLMTLFDDSNSTRWRNLAEAYEAAIKDWRGEESKLLEEISRRVIERLLEPLTEMNDCLDSDHCKLVDATPGIVVTQSARIRGRFTFRLMVELYVHLIMFCEYLHKKFHGRALPSIEDIHPGVLLFEELSRRIAEVRTHLEGEKAELLTLSCLRAPELHAPHTHPSQEALQSCKDYQKAAIQAALGPAIMLGC-KAPDGPMVTETVSESDPLMFAAIXXXXXXXXAARIVDAAVRIGKKTRDQFLSGSGCGLDVYTHRRLLVCDAAIDRCHGDRRAAAEIMMRLGPVWDVCDRDKEIGLFSADGVVLLKLAVERGNFEAATAFGNFIGEEQWETHRKACGVSRNCEIAVNYFCRALTAGDVGAARSLVHLVCTQ-----------SFSAPELAKKARESLEVAARDVPAIALYLGYLLSVGANGLDTDCSSAIGCYKRVLLSSKVNTYFKAHAANNVAVLKALHCSPCDAEHKDVQVSSYLRTAAIAAHSKADTNLAALGMVKTYAGEPDLRRAVDIYRRIFRSPGKVSPVTIIQTCAENKLQLNVIEVDVDKEKQELFCQDLKDRGMALKMYGKVITQETIPYISTNDPEVDPGKK 987
            MTRKR A   S+ PKRARCG R DVKQ+A P WL DAAAAF+N TPPL W GGFYSWGTWL+ LR+QSLW S    K PW QLV+ CR S  V GTAALYRAKNDLVSAII++VYR GET RL+ + QKPA ERDIMRR+RAVVTRQRRHEAAS+T IRYLDLAFVFSAY+DCRLA  ++E+   A  N  VE EL FLQ+KP+AKQ  A TQRME+YMWQHRWLPWY+QMPHM + +LISAREAA AFC+GL CPKF VGTGVRGLSRDHLAG GIMDEWL+TLFD+  S RWR LA  YE+A+KDWRGEE KL+EEISRRVIER+LEPLTE++D LDSDHCKLVDATPGIVVTQSA+ RGRFTFRL+VEL +HLIMFCE+LH +FHG+ LPSIEDIHP VLLF+ELSRR+A+VRTHLE ++AE L  SCLRAP+LH  +THPS EALQ+CKDYQ AAI+AALGP+ +  C K+ + P V E VSESDPLMFAAI        AARI+DAAVRIGKK R++FL+G  C LD+YTHRR +VCDAAIDRC G+RRAAAEIM +L PVW V + DK +G F+ DG++LLK+AVERGNFEAA A G FIG+EQWE HR+ACGV R+    + Y CRA+ AGDVGA+R ++HLVC Q             S  EL +K RE LE+AARDVPAIALYLGYL SVGA G+++DC  A+G YKRVL S+KVNT FKAHAANN A+LKALHC   D E   + V+ YLRTA I  + KAD+NLAAL M    A E +LR+A  +Y R+F++ GK   V++IQ       ++NV E+ V  E QE FC+DLK  GM L+ YG+V+  ETI Y ST   + +  K+
Sbjct:    1 MTRKRTAPLTSDPPKRARCGPRSDVKQEAVPFWLHDAAAAFVNATPPLKWTGGFYSWGTWLDTLRNQSLWTSEPHTKTPWHQLVEACRISDHVRGTAALYRAKNDLVSAIISIVYRCGETLRLSDSEQKPAAERDIMRRIRAVVTRQRRHEAASITLIRYLDLAFVFSAYRDCRLAHASRET--LAHANRDVEQELLFLQSKPSAKQTAAATQRMESYMWQHRWLPWYQQMPHMSNDLLISAREAAHAFCDGLHCPKFDVGTGVRGLSRDHLAGTGIMDEWLVTLFDEPVSPRWRRLAHVYESAVKDWRGEEGKLMEEISRRVIERILEPLTEISDGLDSDHCKLVDATPGIVVTQSAKKRGRFTFRLLVELNIHLIMFCEHLHARFHGKILPSIEDIHPAVLLFDELSRRVAQVRTHLEPDQAERLFASCLRAPDLHNAYTHPSAEALQNCKDYQTAAIKAALGPSRIASCTKSEEFPEV-ENVSESDPLMFAAIVAEWDPQLAARIIDAAVRIGKKKREEFLNGHECSLDLYTHRRTVVCDAAIDRCLGNRRAAAEIMNKLRPVWSVFEGDKGVGSFTRDGLLLLKVAVERGNFEAAVALGIFIGDEQWEDHRQACGVQRDYAAGIEYLCRAVLAGDVGASRDVIHLVCNQIAPMNGAPSLKGDSRCELVQKVRECLEIAARDVPAIALYLGYLHSVGAPGVESDCKFAMGYYKRVLQSNKVNTEFKAHAANNTAILKALHCDSIDCED-GITVAQYLRTAGIVGNPKADSNLAAL-MTANAAEEAELRKAAQMYERVFQANGKEVAVSVIQNSGGGT-EMNVFELLVKNEMQEAFCRDLKSEGMDLQRYGRVLANETIAY-STKAVKAEAEKR 869          
BLAST of Gchil9052.t1 vs. uniprot
Match: R7QT41_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT41_CHOCR)

HSP 1 Score: 753 bits (1944), Expect = 3.230e-257
Identity = 401/839 (47.79%), Postives = 538/839 (64.12%), Query Frame = 0
Query:  149 KQDAFPPWLQDAAAAFINTTPPLSWAGGFYSWGTWLNALRDQSLWASNHENK---PPWRQLVDVCRNSGQVCGTAALYRAKNDLVSAIINLVYRRGETQRLTMARQKPAVERDIMRRVRAVVTRQRRHEAASLTFIRYLDLAFVFSAYKDCRLAQEAKESESFARINTQVEDELNFLQAKPNAKQIGAVTQRMEAYMWQHRWLPWYEQMPHMKDKMLISAREAARAFCNGLPCPKFGVGTGVRGLSRDHLAGAGIMDEWLMTLFDDSNSTRWRNLAEAYEAAIKDWRGEESKLLEEISRRVIERLLEPLTEMNDCLDSDHCKLVDATPGIVVTQSARIRGRFTFRLMVELYVHLIMFCEYLHKKFHGRALPSIEDIHPGVLLFEELSRRIAEVRTHLEGEKAELLTLSCLRAPELHAPHTHPSQEALQSCKDYQKAAIQAALGPAIMLGCKAPDGPMVTETVSESDPLMFAAIXXXXXXXXAARIVDAAVRIGKKTRDQFLSGSGCGLDVYTHRRLLVCDAAIDRCHGDRRAAAEIMMRLGPVWDVCDRDKEIGLFSADGVVLLKLAVERGNFEAATAFGNFIGEEQWETHRKACGVSRNCEIAVNYFCRALTAGDVGAARSLVHLVCTQSFS--------APELAKKARESLEVAARDVPAIALYLGYLLSVGANGLDTDCSSAIGCYKRVLLSSKVNTYFKAHAANNVAVLKALHCSPCDAEHKDVQVS-SYLRTAAIAAHSKADTNLAALGMVKTYAGEPDLRRAVDIYRRIFRSPGKVSPVTIIQTCAENKLQLNVIEVDVDKEKQELFCQDLKDRGMALKMYGKVITQETIPYI 975
            K +A P WL +AA AF+  TP L W GGFYSWGTWL+ LR  S+W +  EN    PPWR L+D C+ S QV GTAALY AK+DLV+ IINLV+R+GE QRLT   +  A ERD+MRRVRAVVTRQRRHEA SLT IR+LDLAFVFSA+KDCR+A     + S  ++   VE EL FL  KP+AK+I  +T RME YMW +RWLPWYEQ+P ++D M+I AREAA AFC GLP P+   GTGVRGLSRDHLAG+  MDEWL+ L D S S RW  L+  YE+A++D RGEE  LLEE SRRV++ +LEPLTE+ + LDS H KLVDA PGI+V+QS  I GRFTFR ++ELY+HL MF EYLH  + GRALPSI++IH G +L+EE+ RR+ EVR  +  +K + L   CL   EL+         AL+    YQ+ A++AA G AI+     P+ P     + ++DPL +AAI        AA+IVDAAVRIG   R +F SG   GLD+YT+RR++VCDAA  R  GD +AAA  M RL PVWDVC+ DK  G F   GV+ L+ A E GNFEA+  +G F+    W   R+ CG+  + E  + + C+A+  GD  AA  L+HL+ +             P+L   + + L+ A R+ P++ L++GYL S+GA  +  DC  A   Y+ VL S   +  F+A+AANN+ VL+ L+     +   +   +  ++R +A AA  KA++NL AL  +++      L  A   Y +   +    +PVT IQ   +   ++NV ++ +  + +E FC++L+  GM ++ YG V+  ET+PY+
Sbjct:   36 KPEAVPQWLNEAATAFVARTPTLRWTGGFYSWGTWLDDLRQLSVWTTTPENTNIAPPWRILIDACKASRQVRGTAALYAAKSDLVNIIINLVFRKGEEQRLTHVNETAAAERDVMRRVRAVVTRQRRHEALSLTLIRFLDLAFVFSAFKDCRVAGAIALNRSAEQVAADVEAELLFLNRKPSAKEIRDLTNRMEQYMWDNRWLPWYEQVPGVRDDMVIRAREAALAFCKGLPFPQIRFGTGVRGLSRDHLAGSKSMDEWLLLLLDPSQSERWSRLSVIYESAVRDERGEEDPLLEETSRRVLQTVLEPLTELREGLDSAHSKLVDAAPGIIVSQSVNIPGRFTFRQLLELYIHLSMFGEYLHTTYRGRALPSIDEIHTGAVLYEEIRRRVWEVRCVINADKMDTLLTWCLATQELYN-----GMPALERRISYQQIAVKAAFGSAIIRHAANPNAPFPEPFIMQNDPLSYAAIVAEWDPPLAAKIVDAAVRIGPAIRARFESGHSDGLDLYTYRRVVVCDAARQRSAGDLQAAARTMARLHPVWDVCEPDKAYGPFDMRGVMRLQAAAEEGNFEASAVYGCFLCSLDWIDRRRQCGIPEDMERGIRFICKAVALGDTAAAADLMHLLLSNPTRIDGHIWEMTPQLVWHSVQCLKEAVREEPSMRLFVGYLYSLGATDVPVDCRVAAKAYQCVLESVTSSPRFQAYAANNLGVLRLLNTPGASSALPEANKAFEFIRASASAADPKAESNLGALLCLESSDSYQQLEMAKQTYWQCLSNRDYNNPVTTIQARRDTS-EVNVYKMRIAPQLREKFCRELRAEGMVMERYGTVLETETVPYV 868          
The following BLAST results are available for this feature:
BLAST of Gchil9052.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJY9_9FLOR0.000e+065.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QT41_CHOCR3.230e-25747.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 421..441
NoneNo IPR availableCOILSCoilCoilcoord: 528..548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..147
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 697..963
e-value: 5.1E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1192156..1195131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9052.t1Gchil9052.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1192156..1195131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9052.t1 ID=Gchil9052.t1|Name=Gchil9052.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=992bp
MDQCFEPWRPTPFDWLYHPSAQASHTRLSRYTALAPAADWPLLPHLKSAR
AASPRAPICGLTFAVAPRLHAIPPSNAHTFFSTPGRRPSRSCTSPHFSSM
LVVNNAQPPSHSTPSHDVHPSPSMTRKRPAAPVSETPKRARCGRRPDVKQ
DAFPPWLQDAAAAFINTTPPLSWAGGFYSWGTWLNALRDQSLWASNHENK
PPWRQLVDVCRNSGQVCGTAALYRAKNDLVSAIINLVYRRGETQRLTMAR
QKPAVERDIMRRVRAVVTRQRRHEAASLTFIRYLDLAFVFSAYKDCRLAQ
EAKESESFARINTQVEDELNFLQAKPNAKQIGAVTQRMEAYMWQHRWLPW
YEQMPHMKDKMLISAREAARAFCNGLPCPKFGVGTGVRGLSRDHLAGAGI
MDEWLMTLFDDSNSTRWRNLAEAYEAAIKDWRGEESKLLEEISRRVIERL
LEPLTEMNDCLDSDHCKLVDATPGIVVTQSARIRGRFTFRLMVELYVHLI
MFCEYLHKKFHGRALPSIEDIHPGVLLFEELSRRIAEVRTHLEGEKAELL
TLSCLRAPELHAPHTHPSQEALQSCKDYQKAAIQAALGPAIMLGCKAPDG
PMVTETVSESDPLMFAAIIAEWDPMLAARIVDAAVRIGKKTRDQFLSGSG
CGLDVYTHRRLLVCDAAIDRCHGDRRAAAEIMMRLGPVWDVCDRDKEIGL
FSADGVVLLKLAVERGNFEAATAFGNFIGEEQWETHRKACGVSRNCEIAV
NYFCRALTAGDVGAARSLVHLVCTQSFSAPELAKKARESLEVAARDVPAI
ALYLGYLLSVGANGLDTDCSSAIGCYKRVLLSSKVNTYFKAHAANNVAVL
KALHCSPCDAEHKDVQVSSYLRTAAIAAHSKADTNLAALGMVKTYAGEPD
LRRAVDIYRRIFRSPGKVSPVTIIQTCAENKLQLNVIEVDVDKEKQELFC
QDLKDRGMALKMYGKVITQETIPYISTNDPEVDPGKKKQSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf