Gchil9051.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9051.t1
Unique NameGchil9051.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length283
Homology
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A2V3IJV6_9FLOR (Ribosomal silencing factor RsfS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJV6_9FLOR)

HSP 1 Score: 264 bits (674), Expect = 2.250e-85
Identity = 139/242 (57.44%), Postives = 181/242 (74.79%), Query Frame = 0
Query:   41 VMHLEEPYEEKRGFEKTSSHSAQSPPVYEEEHVLDFGKGEFDVDENEDYFDDEGLDIVDIPPEGVTLRRKRVRKNVSRLLDEISTEPVSDFTNDADDMPPVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPDEKPAKTSDAALDDWLNQ 282
            +M  EE Y++ R  EK   + ++S    +E++++D    EFD        DD+   +V++P +   L+RK+VRKN+S L+D+IS +PVS FT+DAD+ P +EDDE+   VRT VRAID+RKGE+I AFRV+KL+ ITSF+V+A   NTPQMRAI NLVE+DLFK H M ++RK+G+ ESGWILLDYGDFMVNIFS AQRRNYNLE LW+  E LDVSDCI+  PDE+PA+ S AALDDWLN+
Sbjct:    1 MMGTEERYDDHRT-EKGIQNDSKSSSYSDEDYIVDIEGVEFD--------DDDEPGVVNLP-DSEELKRKKVRKNISDLVDKISMQPVSMFTSDADEQPAIEDDETTKYVRTVVRAIDERKGEDIRAFRVSKLSFITSFVVVAHGKNTPQMRAIRNLVEEDLFKQHQMHAKRKNGIAESGWILLDYGDFMVNIFSKAQRRNYNLEGLWRNAEELDVSDCIVGTPDEEPAEASGAALDDWLNE 232          
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A7S3EKT3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKT3_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 3.240e-35
Identity = 69/140 (49.29%), Postives = 97/140 (69.29%), Query Frame = 0
Query:  139 PPVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRK-DGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPDEKPAKTSDAALD 277
            PP+++DE   IV+TA  A D+RKG NIVA RVAKLT +T+F +  S  + PQ+RAI NLVE+ L + HGM++R    G P SGW+LLDYGD MV++FS  QR+ Y+ E++W+ GE +D+SD +  +   KP +  +  LD
Sbjct:   60 PPLDEDEFTPIVKTAAEAADERKGRNIVALRVAKLTCVTTFFLYISGGSAPQLRAITNLVEERLKEVHGMTTRYGIPGNPASGWLLLDYGDLMVHVFSEEQRKFYDPESIWQHGEQVDLSDVVSPEGLRKPDEVMEYGLD 199          
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A1X6PEN3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEN3_PORUM)

HSP 1 Score: 130 bits (327), Expect = 4.590e-32
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 0
Query:  140 PVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSD-------CIMTKPDEKPAKTSD-----AALDDWLN 281
            P+E+DE     RTAV A D+RK    VA RVA LT + S++V+++  N PQMRAIANLV++ L K H +  R   G P+SGWIL+DYGD +VN+FS   R +YN +  W  GE+LD+S         + T     P    D     + LDDWL+
Sbjct:  191 PIEEDEITPFARTAVLAADERKAVEPVAIRVAALTCMASYVVVSAGRNPPQMRAIANLVQERLGKEHNLKPRHVSGTPDSGWILMDYGDLLVNVFSVESRTHYNFDEFWAAGEMLDMSSYLPGPGAAVGTASGGAPGAAGDGDGAASPLDDWLD 344          
BLAST of Gchil9051.t1 vs. uniprot
Match: W7U178_9STRA (Ribosome-associated, Iojap n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U178_9STRA)

HSP 1 Score: 115 bits (287), Expect = 9.220e-27
Identity = 53/119 (44.54%), Postives = 82/119 (68.91%), Query Frame = 0
Query:  140 PVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRK-DGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVS 257
            P+ +DE+  ++ T   A D RKGE+++A RV++LT ++SF V+ S N+ PQ++AIA  +E+D+ + HG+  R   +G  +SGWILLDYG  +VN+ +   R+ Y LE LWK GE +D+S
Sbjct:  131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWKNGEEVDLS 249          
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A835YP01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP01_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.040e-24
Identity = 60/167 (35.93%), Postives = 100/167 (59.88%), Query Frame = 0
Query:  111 RVRKNVSRLLD-EISTEPVSDFTNDADDMPPVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPDEKPAKTSDAAL 276
            R RK  +++ D   +   V DF    +++PP+  D   G + T  RA D RK +NI A RVA+LT +T+F+V+    + PQ +AIA  + + + + HG  ++++ G P+SGWILLDYGD +++I +   R  Y+LE  W++GE +D+S  ++  P+  P+    A+ 
Sbjct:    3 RSRKGQAQIEDFSKAMNKVKDFV---ENVPPLAQDPGLGEILTIARAADARKAQNINALRVAQLTIVTNFMVVLEGTSRPQNQAIAASIIEAMEEEHGRVTKQQ-GTPDSGWILLDYGDIIIHIMTPKSRAYYDLETFWREGERVDLSGVLV--PNTVPSTRGGASF 163          
BLAST of Gchil9051.t1 vs. uniprot
Match: W7THC1_9STRA (Ribosome-associated, Iojap n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THC1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.520e-24
Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = 0
Query:  140 PVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRK-DGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWK 249
            P+ +DE+  ++ T   A D RKGE+++A RV++LT ++SF V+ S N+ PQ++AIA  +E+D+ + HG+  R   +G  +SGWILLDYG  +VN+ +   R+ Y LE LWK
Sbjct:  131 PLAEDETLPVIETIASAADMRKGEDVLALRVSRLTTVSSFFVLVSGNSRPQIQAIAGAIEEDMLEKHGLEVRNGGEGTADSGWILLDYGSVVVNVMTPVARKFYALEKLWK 241          
BLAST of Gchil9051.t1 vs. uniprot
Match: D8LM97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM97_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.020e-23
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 0
Query:  110 KRVRKNVSRLLDEISTEPVSDFTNDADDMPPVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGE 252
            K+ RK   +  + +S     D+   A     +EDD +   V TAV+A D+RK  NIVA RVA LT +T F+V+   N+ PQ +AIA  +E+ + + H   ++ + G PESGWILLDYGD +V+I +   R  Y+LE+ W  GE
Sbjct:    6 KKARKKEQQFAEGMSPSDGGDYPVCA-----MEDDPTLPEVLTAVKAADERKAGNIVAIRVATLTVMTEFMVVLEGNSRPQNQAIAQNIEEKMEEMHQRKTKSQ-GAPESGWILLDYGDIIVHIMTPKSRSYYDLESFWSNGE 142          
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A7S0VSN1_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSN1_9CRYP)

HSP 1 Score: 105 bits (263), Expect = 2.810e-23
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 0
Query:  140 PVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPDEKPAKTSDAALD-DW 279
            P+E+D S  ++   + A D+RKGE I A RV+ LT  TSF V     + P ++AIA  VE+ + + HG   + + G P+SGWILLDYGD +VNI + A R  Y+LE+LWK GEL+ +   ++  P+   A   +A  D DW
Sbjct:  113 PLEEDPSLPMIEDIIVAADERKGERIWAARVSHLTFTTSFFVNVEGTSRPMLQAIAANVEEMMLEKHGREIKWQ-GKPDSGWILLDYGDVIVNILTTAAREYYDLESLWKNGELIPLDHLVV--PNFNAASDEEALEDGDW 250          
BLAST of Gchil9051.t1 vs. uniprot
Match: L1JY76_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY76_GUITC)

HSP 1 Score: 101 bits (252), Expect = 2.420e-22
Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 0
Query:  140 PVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPDE-KPAKTSDAALDD 278
            P+ +D S  +V+  +RA+D+RK E+I A RV+ LT+ T F +    ++ P ++AIA  VED + + +G   + + G P+SGWILLDYG+ +VNI +AA R  Y+LE  W+ GEL+ + D +        P  + D  LDD
Sbjct:   58 PLAEDPSLPLVQDIIRAMDERKAESIWAARVSHLTYSTEFFINCQGSSRPMLQAIAANVEDIMNEKYGREIKWQ-GNPDSGWILLDYGEVIVNIMTAAAREFYDLEEHWQNGELVPLEDLVTPNSQSTSPVSSFDMGLDD 196          
BLAST of Gchil9051.t1 vs. uniprot
Match: A0A7S2C8T3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8T3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.420e-22
Identity = 65/160 (40.62%), Postives = 89/160 (55.62%), Query Frame = 0
Query:  106 TLRRKRVRKNVSRLLDEISTEPVSDFTNDADDMPPVEDDESAGIVRTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVEDDLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKKGELLDVSDCIMTKPD 265
            T + +RV +  + LLD +    V        D   +EDD    IV    +A D+RK E I+A RV+ LT+ T F V    N+ PQ  AIA  ++DD+ K  G S R  DG  +SGWILLDYGD +VN+ +   R  Y LE  W+KGE +D+S  ++  PD
Sbjct:   47 TQKSERVDRRDNLLLDLLQESIVPG------DQGAIEDDSLLPIVHAIAKAGDKRKAEGILALRVSHLTYTTEFFVNMMGNSRPQNNAIAASIQDDM-KELGRSCRI-DGNADSGWILLDYGDVIVNVMTPRSREYYRLEEFWEKGEEVDLS-AVLLSPD 197          
The following BLAST results are available for this feature:
BLAST of Gchil9051.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJV6_9FLOR2.250e-8557.44Ribosomal silencing factor RsfS n=1 Tax=Gracilario... [more]
A0A7S3EKT3_9RHOD3.240e-3549.29Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PEN3_PORUM4.590e-3244.16Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
W7U178_9STRA9.220e-2744.54Ribosome-associated, Iojap n=2 Tax=Monodopsidaceae... [more]
A0A835YP01_9STRA3.040e-2435.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7THC1_9STRA8.520e-2444.14Ribosome-associated, Iojap n=1 Tax=Nannochloropsis... [more]
D8LM97_ECTSI2.020e-2341.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0VSN1_9CRYP2.810e-2342.55Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
L1JY76_GUITC2.420e-2240.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2C8T3_9STRA2.420e-2240.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02410RsfScoord: 153..248
e-value: 1.7E-20
score: 73.2
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 141..251
e-value: 7.1E-26
score: 92.3
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 148..258
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 150..248
e-value: 1.5E-25
score: 87.2
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 137..255
IPR004394Protein Iojap/ribosomal silencing factor RsfSHAMAPMF_01477Iojap_RsfScoord: 141..249
score: 20.079575

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1189603..1190538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9051.t1Gchil9051.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1189603..1190538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9051.t1 ID=Gchil9051.t1|Name=Gchil9051.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=283bp
MSKTTKAFVPYLPFSQHSTSPLVLSARPGTLPSWRRRRACVMHLEEPYEE
KRGFEKTSSHSAQSPPVYEEEHVLDFGKGEFDVDENEDYFDDEGLDIVDI
PPEGVTLRRKRVRKNVSRLLDEISTEPVSDFTNDADDMPPVEDDESAGIV
RTAVRAIDQRKGENIVAFRVAKLTHITSFIVIASANNTPQMRAIANLVED
DLFKHHGMSSRRKDGVPESGWILLDYGDFMVNIFSAAQRRNYNLEALWKK
GELLDVSDCIMTKPDEKPAKTSDAALDDWLNQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043519NT_sf
IPR004394Iojap/RsfS/C7orf30