Gchil9034.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9034.t1
Unique NameGchil9034.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length112
Homology
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A2V3IUU9_9FLOR (Ferredoxin-thioredoxin reductase, variable chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUU9_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 2.020e-30
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   23 AGRRRCASRTTMELEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            A +R C    +M LEVGQKVRV KSVIMYHYPGKRN+P+D +G EGV++K+VSH + V +SAT P++V F E   KF AHF+E ELEVL
Sbjct:   24 AKKRTCMRPMSMALEVGQKVRVCKSVIMYHYPGKRNEPMDVQGLEGVITKDVSHRDGVEVSATCPYVVSFDETPKKFIAHFEESELEVL 112          
BLAST of Gchil9034.t1 vs. uniprot
Match: K9T085_9CYAN (Ferredoxin thioredoxin reductase variable alpha chain n=3 Tax=Pleurocapsales TaxID=52604 RepID=K9T085_9CYAN)

HSP 1 Score: 79.7 bits (195), Expect = 2.550e-17
Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 0
Query:   35 ELEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            +++VG +VRV KSV++YHYP  +NQP+D +G EG +   V++++  P+SA  P +V+F +    FKAHF+EDE+EV+
Sbjct:   18 KMKVGDRVRVTKSVVVYHYPKSKNQPLDLKGMEGEIIDIVTNWQGRPVSANLPIVVKFEK---NFKAHFREDEVEVI 91          
BLAST of Gchil9034.t1 vs. uniprot
Match: UPI001686018E (ferredoxin-thioredoxin reductase variable chain n=1 Tax=Anabaena sphaerica TaxID=212446 RepID=UPI001686018E)

HSP 1 Score: 76.6 bits (187), Expect = 2.580e-16
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            + +G +VRV +SV++YH+P  RNQP D +G EG +S  V+ ++  P+SA  P +V+FS+   KFKAH +E+ELEV+
Sbjct:    1 MNIGDRVRVKESVVVYHHPENRNQPFDLKGTEGEISAIVTQWQGRPVSANLPILVQFSK---KFKAHLRENELEVI 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A6P0QFA0_9CYAN (Ferredoxin--nitrite reductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QFA0_9CYAN)

HSP 1 Score: 74.7 bits (182), Expect = 1.480e-15
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV KSVI+YH P  RN+P D +G EG V   ++ +   P+SA  P +V+F +   KF+AHF+EDELE+L
Sbjct:    1 MKVGDRVRVTKSVIVYHNPSHRNEPFDAKGQEGEVIGFITEWHGRPVSANLPVLVQFDK---KFRAHFREDELELL 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A352X1X8_9CYAN (Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352X1X8_9CYAN)

HSP 1 Score: 74.3 bits (181), Expect = 2.090e-15
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV KSV++YH+P  RN+P D +G EG VS  V  +   P+SA  P +V+F +   KF+ HF+EDE+E++
Sbjct:    1 MKVGDRVRVKKSVMVYHHPNHRNEPFDVKGLEGEVSGIVVEWHGRPVSANLPVLVQFDK---KFRVHFREDEVEIV 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A1Q8Z8A9_9CYAN (Ferredoxin--nitrite reductase n=2 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8Z8A9_9CYAN)

HSP 1 Score: 74.7 bits (182), Expect = 2.490e-15
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0
Query:   28 CASRTTMELEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            C +     ++VG +VRV+KSV++YH+P  RNQ  D +G EG V    + ++D P+SA  P +V+F+   +KFK H QE ELEVL
Sbjct:   10 CGTEDCCMVKVGDRVRVSKSVVIYHHPEHRNQAFDLQGQEGEVIDFANQWQDRPISANLPIVVKFT---NKFKVHLQEAELEVL 90          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A352AP87_9CYAN (Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AP87_9CYAN)

HSP 1 Score: 73.9 bits (180), Expect = 2.970e-15
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV KS+++YH+P  RN+P D +G EG V   V  +E  P+SA  P  V+F +   KF+AHF+EDELE L
Sbjct:    1 MKVGDRVRVKKSILVYHHPAHRNEPFDIKGLEGEVIGIVLEWEGRPVSANLPLQVQFDK---KFRAHFREDELEQL 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A2T1CHY6_9CYAN (Ferredoxin--nitrite reductase n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CHY6_9CYAN)

HSP 1 Score: 73.9 bits (180), Expect = 2.970e-15
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV +SV++YHYPG RN+  D +G EG V   V+  E  P+SA  P +V+F     KFKAH +E ELEVL
Sbjct:    1 MKVGDRVRVKESVVVYHYPGHRNEAFDIQGQEGEVIALVNELEGKPISANFPILVKFE---GKFKAHLRESELEVL 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A7C9TZE5_9CYAN (Ferredoxin--nitrite reductase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TZE5_9CYAN)

HSP 1 Score: 73.9 bits (180), Expect = 3.130e-15
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV KS+ +YH P KRNQP D EG EG +   V+ +E  P+SA  P +V+F +   KFK H +E ELE++
Sbjct:    1 MKVGDRVRVKKSITVYHNPQKRNQPFDIEGLEGEIIAFVTEWEGRPVSANLPVLVQFDK---KFKVHLKEQELEIV 73          
BLAST of Gchil9034.t1 vs. uniprot
Match: A0A2T2RS31_9CYAN (Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteria bacterium QH_9_48_43 TaxID=1919126 RepID=A0A2T2RS31_9CYAN)

HSP 1 Score: 73.9 bits (180), Expect = 3.290e-15
Identity = 35/76 (46.05%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   36 LEVGQKVRVAKSVIMYHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFKAHFQEDELEVL 111
            ++VG +VRV +SV++YHYP  +N+PVD +G EG V   ++ ++  P+SA  PF V+F +   KF+AH +EDELE++
Sbjct:    1 MKVGDRVRVKESVVVYHYPQNKNEPVDIKGREGEVQAIITEWQGRPVSANFPFKVKFEK---KFQAHLREDELELV 73          
The following BLAST results are available for this feature:
BLAST of Gchil9034.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUU9_9FLOR2.020e-3061.80Ferredoxin-thioredoxin reductase, variable chain n... [more]
K9T085_9CYAN2.550e-1746.75Ferredoxin thioredoxin reductase variable alpha ch... [more]
UPI001686018E2.580e-1647.37ferredoxin-thioredoxin reductase variable chain n=... [more]
A0A6P0QFA0_9CYAN1.480e-1548.68Ferredoxin--nitrite reductase n=2 Tax=unclassified... [more]
A0A352X1X8_9CYAN2.090e-1546.05Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteri... [more]
A0A1Q8Z8A9_9CYAN2.490e-1545.24Ferredoxin--nitrite reductase n=2 Tax=Leptolyngbya... [more]
A0A352AP87_9CYAN2.970e-1548.68Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteri... [more]
A0A2T1CHY6_9CYAN2.970e-1550.00Ferredoxin--nitrite reductase n=1 Tax=filamentous ... [more]
A0A7C9TZE5_9CYAN3.130e-1547.37Ferredoxin--nitrite reductase n=1 Tax=Oscillatoria... [more]
A0A2T2RS31_9CYAN3.290e-1546.05Ferredoxin--nitrite reductase n=1 Tax=Cyanobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004207Ferredoxin thioredoxin reductase, alpha chainPFAMPF02941FeThRed_Acoord: 38..107
e-value: 3.2E-22
score: 78.4
NoneNo IPR availableGENE3D2.30.30.50coord: 36..111
e-value: 1.8E-24
score: 87.5
NoneNo IPR availablePANTHERPTHR46937:SF4FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAINcoord: 8..111
IPR044166Ferredoxin-thioredoxin reductase, variable chainPANTHERPTHR46937FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAINcoord: 8..111
IPR008990Electron transport accessory-like domain superfamilySUPERFAMILY50090Electron transport accessory proteinscoord: 37..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1077069..1077404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9034.t1Gchil9034.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1077069..1077404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9034.t1 ID=Gchil9034.t1|Name=Gchil9034.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=112bp
MTSHPAFASNIAIRAVTPRSSAAGRRRCASRTTMELEVGQKVRVAKSVIM
YHYPGKRNQPVDTEGFEGVVSKNVSHYEDVPMSATAPFIVEFSEPHSKFK
AHFQEDELEVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004207Fd_thioredoxin_Rdtase_alpha
IPR044166FTRV
IPR008990Elect_transpt_acc-like_dom_sf