Gchil9023.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9023.t1
Unique NameGchil9023.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length220
Homology
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A2V3IUZ5_9FLOR (Ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ5_9FLOR)

HSP 1 Score: 372 bits (955), Expect = 2.470e-129
Identity = 182/217 (83.87%), Postives = 197/217 (90.78%), Query Frame = 0
Query:    1 MASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNVCHTTPSNLSLPTNNRS-DHQSTRRHRRTEQEKESLLSLIVWLFVFVALIFGVLSFIT 216
            M SKTS HRLRKEFRNISREPPPHITARPLPSNILKWYFVL+GP  TPYEGGIFMGRL FPEQYPYKPPAV+MCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFML  E+TVGSIQT+ +QKRLLA DSHRYNRSDK+FR+LFPEFVRNV H  PS+L+L   +++ D+QSTR+ RRTEQE+ESLLSLI WLFVFVALIFGVL  IT
Sbjct:    1 MTSKTSTHRLRKEFRNISREPPPHITARPLPSNILKWYFVLEGPTNTPYEGGIFMGRLQFPEQYPYKPPAVYMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLGNEDTVGSIQTTTSQKRLLARDSHRYNRSDKIFRELFPEFVRNVTHPAPSHLALAKRHQTADNQSTRKPRRTEQERESLLSLIAWLFVFVALIFGVLRLIT 217          
BLAST of Gchil9023.t1 vs. uniprot
Match: R7QEW8_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEW8_CHOCR)

HSP 1 Score: 313 bits (802), Expect = 4.940e-106
Identity = 154/221 (69.68%), Postives = 180/221 (81.45%), Query Frame = 0
Query:    1 MASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNVCHTTPSNLSLPT--NNRSDHQSTRRHRRTEQEKESLLSLIVWLFVFVALIFGVLSFITAPP 219
            MASKT  HRLRKE RNISREP PHITARPLPSNIL+WYFVL+GP  +PYEGGIFMGRL FPE+YP+KPPAV+MCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFM+ +E+TVGSIQTS A+KR LA  SH +NR+D++FR+LFPEF+R+     P  +       +++ + S RR R+ E+E ESL+SLI WLFVF+ALIF V   I   P
Sbjct:    1 MASKTCTHRLRKEMRNISREPSPHITARPLPSNILRWYFVLEGPSDSPYEGGIFMGRLQFPEEYPFKPPAVYMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMMGSEDTVGSIQTSAAEKRSLARASHHFNRADRVFRELFPEFIRDA-PAMPRAMQPRAMFTDQNGNVSNRRGRKREEEGESLVSLIAWLFVFLALIFAVFRLIAGSP 220          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A7S2Z989_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z989_9RHOD)

HSP 1 Score: 242 bits (618), Expect = 2.970e-77
Identity = 120/206 (58.25%), Postives = 153/206 (74.27%), Query Frame = 0
Query:    9 RLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRN-VCHTTP---SNLSLPTNNRSDHQSTRRHRRTEQEKESLLSLIVWLFVFVALIFG 210
            RL  E R + R+PPP+IT RPLPS+ILKWYFV++GP  TPYE GI+MG+L+FPE YP+KPPA++MCTP GRF+ N KLCLSMSDFHPETWNP+WSVSAVLTGLLSFM+ TE+T GSI TS  +K  +A  SH +N+ D++F++LFP+F+RN V    P   S  S  T + S  +S  R  +  +E E  L+LI W+ V +AL FG
Sbjct:   61 RLAAELRGVERDPPPYITPRPLPSDILKWYFVIRGPKDTPYETGIYMGKLVFPEDYPFKPPAIYMCTPNGRFRTNVKLCLSMSDFHPETWNPVWSVSAVLTGLLSFMVGTEDTFGSIGTSEFEKIKMAKCSHEFNQKDRIFKELFPDFIRNGVERGIPGGTSGDSAKTESSSLPESDSRTGKPREESE--LALIWWIAVLIALCFG 264          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A7S3E6W6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6W6_9RHOD)

HSP 1 Score: 233 bits (594), Expect = 1.750e-73
Identity = 101/151 (66.89%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    9 RLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRN 159
            RL  E R + R+PPP+IT RPLPS+ILKWYFV++GP  TPYE GI+MG+L+FPE YP+KPPA++MCTP GRF+ N KLCLSMSDFHPETWNP+WSVSAVLTGLLSFM+ TE+T GSI TS  +K  +A  SH +N+ D++F++LFP+F+RN
Sbjct:   61 RLAAELRGVERDPPPYITPRPLPSDILKWYFVIRGPKDTPYETGIYMGKLVFPEDYPFKPPAIYMCTPNGRFRTNVKLCLSMSDFHPETWNPVWSVSAVLTGLLSFMVGTEDTFGSIGTSEFEKIKMAKCSHEFNQKDRIFKELFPDFIRN 211          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A7S0XJ18_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJ18_9RHOD)

HSP 1 Score: 229 bits (585), Expect = 8.570e-73
Identity = 103/157 (65.61%), Postives = 129/157 (82.17%), Query Frame = 0
Query:    1 MASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFV 157
            MAS  +  RLRKE++ I+ +PPPHITARPLPSNIL WYFVL+GPP T + GGI++G+L+FP QYPYKPP+V + TP GRFK   KLCLSMSDFHPETWNPLWSV +VLTGLLSFML  E+T GS++++ ++K  LA  SH++NR D++FR+LFPE V
Sbjct:    1 MASSAATSRLRKEYKMITTDPPPHITARPLPSNILMWYFVLRGPPQTAHTGGIYLGKLVFPTQYPYKPPSVHVLTPSGRFKPGAKLCLSMSDFHPETWNPLWSVGSVLTGLLSFMLGDEDTFGSMRSTRSEKLSLARASHKWNRKDRIFRELFPELV 157          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A5J4Z0Z1_PORPP (Ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0Z1_PORPP)

HSP 1 Score: 229 bits (583), Expect = 2.780e-72
Identity = 103/165 (62.42%), Postives = 134/165 (81.21%), Query Frame = 0
Query:    2 ASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNVCHTTPS 166
            AS+T++ RLRKE+RNI R+PPP ITARP PSNIL+WYFV++GP  TPY+ G++MG+L+FP+ YPYKPPAV+M TP GRFK N KLCLSMSDFHPE WN +W V +VLTGLLSFM+  E+TVGS++++ A+KR  A  SH +N  DK+F +LFPE +R+   T+P+
Sbjct:    4 ASQTALQRLRKEYRNIMRDPPPCITARPHPSNILRWYFVIEGPEDTPYQHGLYMGKLVFPDSYPYKPPAVYMLTPSGRFKPNTKLCLSMSDFHPEEWNAIWGVGSVLTGLLSFMVGNEDTVGSMRSTDAEKRKYATASHDWNEKDKMFAELFPELLRSE-RTSPA 167          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A1X6PET9_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PET9_PORUM)

HSP 1 Score: 213 bits (542), Expect = 2.320e-65
Identity = 92/166 (55.42%), Postives = 125/166 (75.30%), Query Frame = 0
Query:    1 MASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNVCHTTPS 166
            MA+ T + RLRKE RN+ REPPPH+TARP+PSN+L+W FV++GPPGTPY GG+++GRL FP+ YP+ PP ++M TP GRF+    +C+SM+  H E+WNP+W +S +L+G LSFM   E T G+I++S A K+ LA  SH YNR DK+FR+LFP+FV +     PS
Sbjct:    1 MATPTCLARLRKELRNLHREPPPHVTARPVPSNMLRWLFVIEGPPGTPYAGGLYVGRLEFPKDYPFHPPTLYMHTPSGRFETGVSVCMSMTSAHVESWNPIWGLSTILSGFLSFMTSDEMTAGAIRSSDADKQRLARKSHAYNRKDKIFRELFPDFVPSDAVWEPS 166          
BLAST of Gchil9023.t1 vs. uniprot
Match: UPI00140399E7 (ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140399E7)

HSP 1 Score: 209 bits (533), Expect = 1.280e-64
Identity = 89/156 (57.05%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    5 TSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNV 160
            T+  RL++++  I R+P P+++A PLPSNIL+W++V++GP  TPYEGG++ GRLLFP ++P+KPP+++M TP GRFKCN +LCLS+SDFHP++WNP WSVS +LTGLLSFM+E   T+GSI TS   KR LAA S  +N  DK+F +LFP+ V  +
Sbjct:   15 TATQRLKQDYLRIQRDPVPYVSAEPLPSNILEWHYVVRGPEKTPYEGGLYHGRLLFPREFPFKPPSIYMVTPNGRFKCNTRLCLSISDFHPDSWNPAWSVSTILTGLLSFMVERGATLGSIDTSDYTKRQLAAQSGLFNLRDKVFTELFPDIVTEI 170          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A7S2ZB86_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZB86_9RHOD)

HSP 1 Score: 205 bits (522), Expect = 1.320e-64
Identity = 92/134 (68.66%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    3 SKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLA 136
            S  +V RL  E R + R+PPP+IT RPLPS+ILKWYFV++GP  TPYE GI+MG+L+FPE YP+KPPA++MCTP GRF+ N KLCLSMSDFHPETWNP+WSVSAVLTGLLSFM+ TE+T GSI TS  +K  +A
Sbjct:    2 SACAVKRLAAELRGVERDPPPYITPRPLPSDILKWYFVIRGPKDTPYETGIYMGKLVFPEDYPFKPPAIYMCTPNGRFRTNVKLCLSMSDFHPETWNPVWSVSAVLTGLLSFMVGTEDTFGSIGTSEFEKIKMA 135          
BLAST of Gchil9023.t1 vs. uniprot
Match: A0A7L1C7Q5_9PASS (UB2J2 enzyme (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7L1C7Q5_9PASS)

HSP 1 Score: 207 bits (526), Expect = 1.510e-64
Identity = 89/159 (55.97%), Postives = 123/159 (77.36%), Query Frame = 0
Query:    2 ASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYEGGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNPLWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFRDLFPEFVRNV 160
            A  T+  RL++++  I ++P P+I A PLPSNIL+W++V++GP  TPYEGG + G+L+FP ++P+KPP+++M TP GRFKCN +LCLS++DFHP+TWNP WSVS +LTGLLSFM+E   T+GSI+TS   KR LAA S  +N  DK+F +LFPE V  +
Sbjct:    9 APTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPELTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSEFTKRQLAAQSLAFNLKDKVFCELFPEVVEEI 167          
The following BLAST results are available for this feature:
BLAST of Gchil9023.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUZ5_9FLOR2.470e-12983.87Ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Gracila... [more]
R7QEW8_CHOCR4.940e-10669.68UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A7S2Z989_9RHOD2.970e-7758.25Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E6W6_9RHOD1.750e-7366.89Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0XJ18_9RHOD8.570e-7365.61Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z0Z1_PORPP2.780e-7262.42Ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Porphyr... [more]
A0A1X6PET9_PORUM2.320e-6555.42UBC core domain-containing protein n=1 Tax=Porphyr... [more]
UPI00140399E71.280e-6457.05ubiquitin-conjugating enzyme E2 J2 n=1 Tax=Petromy... [more]
A0A7S2ZB86_9RHOD1.320e-6468.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7L1C7Q5_9PASS1.510e-6455.97UB2J2 enzyme (Fragment) n=2 Tax=Passeriformes TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..162
e-value: 6.7E-31
score: 118.6
NoneNo IPR availablePANTHERPTHR24067:SF257UBIQUITIN CONJUGATING ENZYMEcoord: 2..176
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 2..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..215
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..192
e-value: 8.7E-55
score: 187.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 7..132
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 9..130
e-value: 1.4E-19
score: 70.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 5..162
score: 39.164948
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 9..117
e-value: 1.94389E-43
score: 140.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1043012..1043877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9023.t1Gchil9023.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1043012..1043877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9023.t1 ID=Gchil9023.t1|Name=Gchil9023.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=220bp
MASKTSVHRLRKEFRNISREPPPHITARPLPSNILKWYFVLQGPPGTPYE
GGIFMGRLLFPEQYPYKPPAVFMCTPQGRFKCNQKLCLSMSDFHPETWNP
LWSVSAVLTGLLSFMLETEETVGSIQTSHAQKRLLAADSHRYNRSDKLFR
DLFPEFVRNVCHTTPSNLSLPTNNRSDHQSTRRHRRTEQEKESLLSLIVW
LFVFVALIFGVLSFITAPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2