Gchil9006.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9006.t1
Unique NameGchil9006.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length237
Homology
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A2V3ITH9_9FLOR (Protein sym-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITH9_9FLOR)

HSP 1 Score: 355 bits (912), Expect = 8.650e-122
Identity = 183/239 (76.57%), Postives = 198/239 (82.85%), Query Frame = 0
Query:    1 MLQFRTPRNPFKFDGGKGPGRFSGGGNPF-GGSSGSGFGSGRGSNNRRGPTGGG--AADNSGNIFTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            ML FR PRNPF F    G  RF GG +PF GGS GSGFGSG               AADNSGN+FT++W  YN+SLE NPIITKA TSL+GFFLGDL+AQKFLGEK A+IDK RL RMASFGFLIHGPTGHYFYSALDRVIVG  PLKVASKV++DQVFWAPIFTALFF YLGVAERK+ EQIK KVKNDTWKGV+ SWKFWPLAHTINFAFIPT+QRLLYINTLQVGYN+ILS+LGNK
Sbjct:   28 MLLFRNPRNPFNFGSSGGSSRFFGGKSPFNGGSFGSGFGSGXXXXXXXXXXXXXXXAADNSGNVFTAIWNGYNASLEKNPIITKALTSLVGFFLGDLIAQKFLGEKGADIDKARLARMASFGFLIHGPTGHYFYSALDRVIVGTAPLKVASKVVIDQVFWAPIFTALFFGYLGVAERKSFEQIKEKVKNDTWKGVQASWKFWPLAHTINFAFIPTAQRLLYINTLQVGYNVILSLLGNK 266          
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A5J4YL21_PORPP (Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL21_PORPP)

HSP 1 Score: 256 bits (654), Expect = 3.500e-82
Identity = 119/186 (63.98%), Postives = 143/186 (76.88%), Query Frame = 0
Query:   52 GGAADN-SGNIFTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            GGA D  S N   + W +YNS+LE+ P++ KA TS +GF LGD+LAQKFLG K+A +D  RLGRMA+FGFLIHGPTGHYFY ALDR I G    KVASKV +DQ+ WAPIFT +FFA++G  E ++V+ IK KVK DTW GV  SWK WPL HTINF FIP+SQRLLYINT+Q+ YNM LS++ NK
Sbjct:  102 GGAGDGASSNPLLTFWKAYNSALEAQPLLIKAMTSFVGFSLGDILAQKFLGPKNAALDMNRLGRMAAFGFLIHGPTGHYFYGALDRAIPGTEAWKVASKVAIDQILWAPIFTVMFFAFIGAMEGRSVDDIKQKVKRDTWTGVTGSWKVWPLVHTINFRFIPSSQRLLYINTIQIAYNMFLSLIANK 287          
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A7S0BQD5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQD5_9RHOD)

HSP 1 Score: 232 bits (591), Expect = 4.830e-73
Identity = 110/176 (62.50%), Postives = 134/176 (76.14%), Query Frame = 0
Query:   60 NIFTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGN 235
            N   +LW +YNS LE+ PI+TKA TSL+GF +GDLLAQK+LG+++ + D  RL RMA+FG L HGPTGHYFY  LDR+IVG  PLKV SKV +DQ+ WAPIF   FF  LG  E K+V++IK K++ND    V TSWK WPLAH INF FIPT QRLLYIN +Q+GYN+ LSI+GN
Sbjct:   84 NPLVALWAAYNSLLETQPILTKALTSLVGFAVGDLLAQKYLGDEEFKYD--RLLRMAAFGALFHGPTGHYFYGFLDRLIVGTEPLKVISKVAIDQLLWAPIFGVAFFGILGAMEGKSVKEIKAKIENDLVTAVTTSWKVWPLAHAINFRFIPTEQRLLYINAIQIGYNVFLSIIGN 257          
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A7S2KJH8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJH8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 6.250e-65
Identity = 99/175 (56.57%), Postives = 119/175 (68.00%), Query Frame = 0
Query:   62 FTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
             + +W  YN  L S P++TKA TSL GF LGD+LAQ F+ + D   D  R  R+ SFGFLIHG TGHYFY  LD  + G  P+ VA+KVI DQVFW PIF  +FF YL + E K+ +  KNK++ D    V  SW  W  AHTINFAFIP SQRLLYINT+Q+GYN+ LS LGNK
Sbjct:    1 MSGIWAKYNQLLSSQPLLTKALTSLTGFTLGDVLAQNFIEDSDKPYDVMRTVRLGSFGFLIHGTTGHYFYGFLDSKLPGTKPVTVATKVITDQVFWNPIFGCMFFGYLNLVEGKSFQDYKNKLQADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINTIQIGYNVFLSFLGNK 175          
BLAST of Gchil9006.t1 vs. uniprot
Match: Q0IHG9_XENLA (MGC154358 protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=Q0IHG9_XENLA)

HSP 1 Score: 207 bits (528), Expect = 2.040e-64
Identity = 98/177 (55.37%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   61 IFTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKF-LGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            +F  LWT YN++LE+NP++ KA TSL GF LGD+LAQKF + +K+   D  R  R+ SFGFL+HGPTGHYFYS LD+ I G     VA+KV +DQ+ W P F  +FF+YLG+AE K+   I+ K+KND    V  SW  W  AH +NF F+P+SQRLLYIN++Q+GYN+ LS LGNK
Sbjct:    1 MFGRLWTKYNAALETNPLLIKAVTSLTGFTLGDILAQKFVMPDKEKGYDLMRTVRLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177          
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.050e-64
Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   65 LWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            +W +YN+SL+  PI+TKA TS+IGF LGD LAQKF+  K  +ID  RLGRMASFG LIHG TGH+FY  LD  I G   L VA+KV +DQ  W PIF  +FF Y+G AE  +   +K +++N+ W  VK SW  WP+AH INF  IPTSQRLLYIN++Q+GYNM LSIL  +
Sbjct:  117 IWAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFI-SKSEKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287          
BLAST of Gchil9006.t1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 4.510e-64
Identity = 95/175 (54.29%), Postives = 123/175 (70.29%), Query Frame = 0
Query:   62 FTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
             + +W +YN +L + P++ KA TS  GF +GD+LAQKF+  +D + D  R  R+ +FG L+HGPTGHYFY  LD  + G  P+ VASKV +DQ  W PIF  +FF YLG+AE K+V+ I+ K+KND    V  SW  W  AHTINF F+PTSQRLLYINT+Q+GYN+ LS LGNK
Sbjct:    1 MSGIWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPED-DYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNK 174          
BLAST of Gchil9006.t1 vs. uniprot
Match: W7TZ10_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ10_9STRA)

HSP 1 Score: 208 bits (530), Expect = 5.600e-64
Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 0
Query:   65 LWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            LW  YN  L++NP+ TKA TSL+GF +GDLLAQ FLGEK A +D  RL R+ASFG  +HGP GH+FY ALD          VA KV++DQV WAP+FT +FFA++ V +   +++IK K+  D  +GV  SWK WPL H INF FIP  QRLLYINT+Q+GYN+ LS+L ++
Sbjct:   81 LWDKYNEVLDTNPLPTKAVTSLVGFTIGDLLAQSFLGEKGAPLDVKRLLRLASFGLAVHGPVGHFFYGALDEKFPKKDAQTVAIKVLIDQVLWAPVFTVIFFAWIEVLQGAGLQKIKQKINQDLVRGVTASWKVWPLVHVINFRFIPPQQRLLYINTIQIGYNVFLSMLASR 252          
BLAST of Gchil9006.t1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.490e-63
Identity = 96/172 (55.81%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   65 LWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            +W +YN +L + P++ KA TSL GF +GD+LAQKF+  KDAE D  R  R+ SFG L+HGPTGH+FY  LD  + G  P+ VA+KV +DQ  W PIF  +FF+YLG+ E K+V+QI  K+K D    V  SW  W  AHTINF F+PTSQRLLYIN++Q+GYN+ LS LGNK
Sbjct:    4 IWAAYNRALTAQPLLVKACTSLTGFTVGDILAQKFI-NKDAEYDFMRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTVATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNK 174          
BLAST of Gchil9006.t1 vs. uniprot
Match: W7U673_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U673_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.290e-63
Identity = 94/172 (54.65%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   65 LWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFLGEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKVIVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWPLAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK 236
            LW  YN  L+  P++TKA TS +GF +GDLLAQKF+ +K   +D  RL ++A FG L+HGPTGHYFY  LD  + G + + VASKV +DQ+ W PIF  +FF +LG+ E + +E IKN+++ D W  VK SW  WP+AH INF FIP SQRLLYIN++Q+GYNM LS L N+
Sbjct:  104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFI-DKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANR 274          
The following BLAST results are available for this feature:
BLAST of Gchil9006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITH9_9FLOR8.650e-12276.57Protein sym-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A5J4YL21_PORPP3.500e-8263.98Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A7S0BQD5_9RHOD4.830e-7362.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2KJH8_9STRA6.250e-6556.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
Q0IHG9_XENLA2.040e-6455.37MGC154358 protein n=1 Tax=Xenopus laevis TaxID=835... [more]
A0A835Z9Q4_9STRA2.050e-6457.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LGB2_ECTSI4.510e-6454.29Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]
W7TZ10_9STRA5.600e-6455.23Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A835Z5E2_9STRA1.490e-6355.81Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
W7U673_9STRA2.290e-6354.65Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 170..231
e-value: 8.4E-21
score: 73.9
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 63..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..131
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 118..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:939536..940346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9006.t1Gchil9006.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 939536..940346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9006.t1 ID=Gchil9006.t1|Name=Gchil9006.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=237bp
MLQFRTPRNPFKFDGGKGPGRFSGGGNPFGGSSGSGFGSGRGSNNRRGPT
GGGAADNSGNIFTSLWTSYNSSLESNPIITKAFTSLIGFFLGDLLAQKFL
GEKDAEIDKGRLGRMASFGFLIHGPTGHYFYSALDRVIVGATPLKVASKV
IVDQVFWAPIFTALFFAYLGVAERKTVEQIKNKVKNDTWKGVKTSWKFWP
LAHTINFAFIPTSQRLLYINTLQVGYNMILSILGNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22