Gchil8997.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8997.t1
Unique NameGchil8997.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length266
Homology
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A2V3ITG4_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITG4_9FLOR)

HSP 1 Score: 357 bits (917), Expect = 4.820e-122
Identity = 176/250 (70.40%), Postives = 210/250 (84.00%), Query Frame = 0
Query:   17 PAVARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEPLTA-VETDAKLASLSIEQGTLGVSFWKIILGALAAAAIVAAIVCIVIPLWRRRRKATPLPLTTQEGTEW 265
            P +ARA C G+QSYVLSL+MSFT+ +NPLIPP  KARIPVVVAVAHKP+Y LFE AKKL+D AAEVASAGKAD++K QF  L D GDV SF IL DVPIDD+SQL+L+VK SAS+ISLMAQLSPSP+WF+GIDSL+LC++S FI+ER NI VKN+NSGLD SREFD+SNPY+EGET+PVEPL   ++ D  LA LS+EQGTLGV +WKI+LG L A A++    C++IPLWRRRRK   +PLTTQ+GTEW
Sbjct:   18 PHLARADCEGDQSYVLSLQMSFTKAVNPLIPPPEKARIPVVVAVAHKPSYHLFEKAKKLTDQAAEVASAGKADDVKQQFKKLSDKGDVASFQILKDVPIDDLSQLELRVKGSASRISLMAQLSPSPAWFIGIDSLDLCQQSKFILERSNIRVKNFNSGLDRSREFDMSNPYNEGETIPVEPLAGTIDNDDLLAVLSVEQGTLGVDWWKILLGVLVALAVIVVTTCVLIPLWRRRRKRADIPLTTQQGTEW 267          
BLAST of Gchil8997.t1 vs. uniprot
Match: R7QAQ2_CHOCR (Spondin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAQ2_CHOCR)

HSP 1 Score: 201 bits (510), Expect = 2.240e-60
Identity = 107/247 (43.32%), Postives = 162/247 (65.59%), Query Frame = 0
Query:   20 ARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLS-NPYDEGETLPVEPLTAVETDAKLASLSIEQGTLGVSFWKIILGALAAAAIVAAIVCIVIPLWRRRRKATPLPLTTQEGTEW 265
            A  AC G QSYVLS++ SFT++  P +P   KARIP+V+AVAH  ++ LF    KL+D  AEVA  G+A+ +  + + L+++G V SFS+   VPID+V++L+L V+D AS +S++A LSPSP+WF G+   +LC +  FI    ++ + NYN+GL     F  + +PY EG+T+ V P  ++ +D+  A LS+E+G+LGV +WKI LG L A A+   +   ++P  RR+ K T +PLT  +G +W
Sbjct:   24 ADGACQGRQSYVLSIQTSFTRSTLPTVP--DKARIPLVIAVAHSSSFNLFLKGDKLTDEVAEVAEKGRAELLATRLNALKESGVVSSFSVEEGVPIDEVTKLELTVEDEASLVSIIAPLSPSPAWFAGLSGHDLCNEGEFI-PADSLELVNYNAGLQRGTAFGANVDPYPEGKTIAVGPEESL-SDSVFARLSLEEGSLGVDWWKIFLGVLVAVAVAIVVTVFILPRCRRK-KTTDIPLTAPDGVQW 265          
BLAST of Gchil8997.t1 vs. uniprot
Match: UPI000F5574F7 (spondin-2-like isoform X1 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F5574F7)

HSP 1 Score: 80.5 bits (197), Expect = 3.010e-14
Identity = 52/188 (27.66%), Postives = 89/188 (47.34%), Query Frame = 0
Query:   14 VLLPAVARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPIDDVSQ---LQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEPL 198
            VL+ +   A C G  +Y L+ K S+T++ +P  P    A    ++   H  +Y ++      S     VA  G+   +K + +  + TG V+   IL    +  V +   + +KV  + S++SL++ L+PSP WF+GIDS +LC+   +        +  Y+SG D    F    P     T+P  P+
Sbjct:   14 VLVASSMAAKCPGNANYTLTWKASWTRDNHPNTPLPSGAHFSNLIGCTHGSDYIMWRRGMNASAGVKSVAELGQTGTLKAEIEAQKSTGKVWQL-ILPGYGLGAVEERTGIPVKVTSNFSRVSLISMLAPSPDWFIGIDSHDLCDNGQWRKTWDVTMLPPYDSGTDSEPTFIGDQP-----TVPPVPI 195          
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A3M6TRL1_POCDA (Spondin domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TRL1_POCDA)

HSP 1 Score: 82.0 bits (201), Expect = 5.410e-14
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 0
Query:    1 MRFHPCLLSALLLVLLPAVARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVP----IDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSN 185
            M  H   L A+L V++ +     C G  +Y LS K ++T+  +P       A    ++  +H  +Y ++   +K S     VA  G+   +K + +     G      IL   P    +D+++ +Q+KV  + S++SL++ L+PSP WFVGIDS +LC+   +        +  Y+SG D   +F+  N
Sbjct:    1 MAQHIGTLLAVLSVVVVSSTAVKCPGTATYTLSWKATWTKANHPNTVLPSSAHFSPLIGCSHSADYIMWRRGQKASSGVKVVAETGQTGTLKGEIESQISGGKALQL-ILPAGPGLGAVDELTSIQVKVTSNFSRVSLISMLAPSPDWFVGIDSHDLCDNGQWRETWNVTMLPPYDSGTDSGLQFNSVN 188          
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A3M6TRG0_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TRG0_POCDA)

HSP 1 Score: 80.9 bits (198), Expect = 9.030e-14
Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 0
Query:    8 LSALLLVLLPAVARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPIDDVSQ---LQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEPL 198
            L A + VL+ +   A C G  +Y L+ K S+T++ +P  P    A    ++   H  +Y ++      S     VA  G+   +K + +  + TG V+   IL    +  V +   + +KV  + S++SL++ L+PSP WF+GIDS +LC+   +        +  Y+SG D    F    P     T+P  P+
Sbjct:  183 LRAFVNVLVASSMAAKCPGNANYTLTWKASWTRDNHPNTPLPSGAHFSNLIGCTHGSDYIMWRRGMNASAGVKSVAELGQTGTLKAEIEAQKSTGKVWQL-ILPGYGLGAVEERTGIPVKVTSNFSRVSLISMLAPSPDWFIGIDSHDLCDNGQWRKTWDVTMLPPYDSGTDSEPTFIGDQP-----TVPPVPI 370          
BLAST of Gchil8997.t1 vs. uniprot
Match: UPI000C046473 (uncharacterized protein LOC111336728 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C046473)

HSP 1 Score: 79.0 bits (193), Expect = 2.810e-13
Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 0
Query:   24 CSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDV--PIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEP 197
            C G  +Y LS K  +TQ  +P       A    ++  +H  +Y ++   +K S     VA  G+   ++ + +     G  +   +       + D+  +Q+KV  + S++SL++ L+PSP WFVGIDS +LC+   +        +  Y+SG D  ++F  +N       LP +P
Sbjct:   24 CPGTATYTLSWKADWTQANHPNTALPSNAHFSPLIGCSHSTDYIMWRRGQKASAGVKLVAERGQTGTLRSEIESQISDGKAWQLILPGSGLGAVGDLPNIQVKVTSNFSRVSLISMLAPSPDWFVGIDSHDLCDNGQWRETWNVTMLPPYDSGTDSGQQFINNN-------LPTQP 192          
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A2B4RW61_STYPI (Spondin-2 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RW61_STYPI)

HSP 1 Score: 77.0 bits (188), Expect = 6.330e-13
Identity = 45/176 (25.57%), Postives = 83/176 (47.16%), Query Frame = 0
Query:   24 CSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDV--PIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEP 197
            C G  +Y LS K  +TQ  +P       A    ++  +H  +Y ++   +K S     VA  G+   ++ + +     G  +   +       + +++ +Q+ V  + S++SL++ L+PSP WFVGIDS +LC+   +        +  Y+SG D  ++F  +N       LP +P
Sbjct:   24 CPGTATYTLSWKADWTQANHPNTALPSNAHFSPLIGCSHSTDYIMWRRGQKASAGVKLVAERGQTGTLRSEIESQISDGKAWQLILPRSGLGAVGELNNIQVNVTSNFSRVSLISMLAPSPDWFVGIDSHDLCDNGQWRETWNVTMLPPYDSGTDSGQQFINNN-------LPTQP 192          
BLAST of Gchil8997.t1 vs. uniprot
Match: UPI0009E3F983 (uncharacterized protein LOC110046077 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3F983)

HSP 1 Score: 73.2 bits (178), Expect = 4.180e-11
Identity = 51/187 (27.27%), Postives = 84/187 (44.92%), Query Frame = 0
Query:   24 CSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGD-VYSFSILHDVPIDDVSQLQL-KVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKN---YNSGLDGSREFDLSNPYDEGETLPVEPLTAVETDA 205
            CSGEQ Y L  +  ++    P+      A    ++   HK NY+ +      S    EVA AG    + +    ++D G  VYS     D      ++  +   K   SK+S++A ++PSP WFVG+DS+ELC        + ++  K    +++G D    F   N     ET+P + +  +  D+
Sbjct:  238 CSGEQKYQLKFEGMWSNERQPVTTFPAGAHFSKLIGCTHKYNYKFWSPMTMASQGVKEVAEAGTEATLYNDLTTVKDKGGYVYSVFKADDKTEPTATRTMIITAKGMYSKVSVIAMIAPSPDWFVGVDSVELCGDDG--EWKDSVPAKPLPAWDAGTDSGTTFAADNV----ETMPKDVVKQITKDS 418          
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A7Y3DWM0_9FLAO (Spondin domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y3DWM0_9FLAO)

HSP 1 Score: 68.6 bits (166), Expect = 4.170e-10
Identity = 45/192 (23.44%), Postives = 90/192 (46.88%), Query Frame = 0
Query:   27 EQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPV--EPLT--AVETDAKLASLSIEQ 214
            + +Y ++   +FT   +P   P      P++V VAH     +F      ++     A  G   +++ + + + DT D+ +  I   +  D    + + +  + +++S +A+LSPSP WFVG+DS  L      +V    + +  Y++G DG   +D ++  + G    V  +P    A  + ++  +L IE+
Sbjct:   41 QATYRITFTPNFTDQSHPTDYPANPGFGPMMV-VAHPSTVSVFREGLSATEGLEMYAEDGVTSQLEVELNSVPDT-DLPTIRIGSQISADASDFIDIVITPNTTRLSFIAKLSPSPDWFVGVDSFNLVNPDNTLVAEFELTLLAYDAGTDGGTTYDSADVEESGAVQVVSGDPFVNPATSSVSRFGTLHIER 230          
BLAST of Gchil8997.t1 vs. uniprot
Match: A0A2B4RQ56_STYPI (Spondin-1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQ56_STYPI)

HSP 1 Score: 68.2 bits (165), Expect = 6.750e-10
Identity = 47/195 (24.10%), Postives = 91/195 (46.67%), Query Frame = 0
Query:    7 LLSALLLVLLPAVARAACSGEQSYVLSLKMSFTQNINPLIPPRGKARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRDTGDVYSFSILHDVPID---DVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDSLELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEPL 198
            +++A + VL+ +     C G+ +Y L+ + S++   +P       A    ++   H   Y ++      S     VA  G+   ++ +  + +D   V+   IL    +    + + +++KV    SK+SL++ L PSP W+VGIDS +LC    +        +  Y+SG D   +F+ S+      T+P +P+
Sbjct:    7 IIAAFVNVLVASSMAVKCPGDVTYTLTWRGSWSTENHPNATLPSGAHFSNLIGCTHGSEYIMWRTGMMASPGVKLVAEEGQTGTLETEIKVQKDAEKVWQV-ILPGFGLGAEAEKTDIEVKVTPDYSKVSLISMLGPSPDWYVGIDSHDLCNDGQWRKTWDVTMLPPYDSGTDSGLQFESSDQ----PTVPPQPI 196          
The following BLAST results are available for this feature:
BLAST of Gchil8997.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITG4_9FLOR4.820e-12270.40Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QAQ2_CHOCR2.240e-6043.32Spondin domain-containing protein n=1 Tax=Chondrus... [more]
UPI000F5574F73.010e-1427.66spondin-2-like isoform X1 n=2 Tax=Pocillopora dami... [more]
A0A3M6TRL1_POCDA5.410e-1428.04Spondin domain-containing protein n=2 Tax=Pocillop... [more]
A0A3M6TRG0_POCDA9.030e-1427.84Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
UPI000C0464732.810e-1326.70uncharacterized protein LOC111336728 n=1 Tax=Stylo... [more]
A0A2B4RW61_STYPI6.330e-1325.57Spondin-2 n=2 Tax=Stylophora pistillata TaxID=5042... [more]
UPI0009E3F9834.180e-1127.27uncharacterized protein LOC110046077 n=1 Tax=Orbic... [more]
A0A7Y3DWM0_9FLAO4.170e-1023.44Spondin domain-containing protein n=1 Tax=Flavobac... [more]
A0A2B4RQ56_STYPI6.750e-1024.10Spondin-1 n=1 Tax=Stylophora pistillata TaxID=5042... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 29..185
e-value: 2.5E-19
score: 70.1
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 18..205
score: 21.247524
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 17..204
e-value: 4.9E-20
score: 74.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availableTMHMMTMhelixcoord: 224..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:906727..907524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8997.t1Gchil8997.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 906727..907524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8997.t1 ID=Gchil8997.t1|Name=Gchil8997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=266bp
MRFHPCLLSALLLVLLPAVARAACSGEQSYVLSLKMSFTQNINPLIPPRG
KARIPVVVAVAHKPNYRLFEGAKKLSDAAAEVASAGKADEIKHQFDLLRD
TGDVYSFSILHDVPIDDVSQLQLKVKDSASKISLMAQLSPSPSWFVGIDS
LELCEKSTFIVERQNIAVKNYNSGLDGSREFDLSNPYDEGETLPVEPLTA
VETDAKLASLSIEQGTLGVSFWKIILGALAAAAIVAAIVCIVIPLWRRRR
KATPLPLTTQEGTEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf