Gchil8996.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8996.t1
Unique NameGchil8996.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length293
Homology
BLAST of Gchil8996.t1 vs. uniprot
Match: A0A2V3ITI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI7_9FLOR)

HSP 1 Score: 236 bits (601), Expect = 5.300e-73
Identity = 155/297 (52.19%), Postives = 195/297 (65.66%), Query Frame = 0
Query:   16 PTNFAFHNPQSIGQIWSELASITVSAFNPQLIARLRTFIAQTPCFELENHLQMLGSIVVRHVTLCLSDTDP-LSSSQPRKQSQPSLSRSEMRTKRRSYRDIAYHAVRINRIVPQSQPLQVESTSSS----ITN-IPRRLSIQKAASLLDVAKKRPSSTVRPCEHTPSPTKENNNIIFNQ---------TPNPSPPQQPTN-------NPSIALREETLNSCSQSRAHAFPRAGVATFIESASMRNVTTPKSRQKVVAQPQNLTEYTNRFKSDSKTA-APISRLVQMRKQRAEKKRHN 289
            P+N+   +P +IGQIW+ELA+ITV AF PQLI RLR FI++TPCF+L+ HLQMLG IVVRH+ L L++ D  L+     + S+ S+SRS  RTKRRSYRDIAYHAVRINRIVP S PL+   +SSS    +TN +PRRLSIQKA SL  + ++R S +    E+ P+ T         Q         T    PP+           N S+ALREET  + +Q+RAH FPRA V T IE  S    T   +R +VVAQPQNL+EY +R ++DS +A APISRLVQMRKQRAE+KR N
Sbjct:   25 PSNYPCQHP-NIGQIWTELATITVQAFTPQLITRLRAFISKTPCFDLDTHLQMLGPIVVRHIALTLAEPDQCLNPPSTARSSRSSISRSNSRTKRRSYRDIAYHAVRINRIVPHSIPLESHRSSSSAAAPVTNSLPRRLSIQKAPSLSTI-QRRASKSAPDKENQPTVTTARTAHAAAQPAXXXSAHATARNEPPEGACKPKALDLCNRSVALREETCWTRTQNRAHHFPRADVTTRIEPVS----TAKSARPRVVAQPQNLSEYASRLRNDSHSAVAPISRLVQMRKQRAERKRQN 315          
BLAST of Gchil8996.t1 vs. uniprot
Match: R7QEK4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK4_CHOCR)

HSP 1 Score: 84.7 bits (208), Expect = 3.050e-15
Identity = 99/320 (30.94%), Postives = 139/320 (43.44%), Query Frame = 0
Query:    5 NPTLASPLPADPTNFAFHNPQSIGQIWSELASITVSAFNPQLIARLRTFIAQTPCFELENHLQMLGSIVVRHVTLCLSDTD----------PLSSSQP------------------RKQSQPSLSRSEMRTKRR--SYRDIAYHAVRINRIVPQSQPLQVESTSSSIT---NIPRRLSIQKAASLLDVA--KKRPSSTVRPCEHTPSPTKENNNIIFNQTPNPSPPQQPTNNP---SIALREETLNSCSQSRAHAFPRAGVATFIESASMRNVTTPKSRQKVVAQPQNLTEYTNRFKSDSKTAAPISRLVQMRKQRAEKK 286
            N T+A PLP          P    +  +ELAS+TV  F+P +++ +R    +     ++ HL +LG++ VRHV L + + D            S   P                  R +S P L+R   R  +R  SYRDIAY+AVR  RI+P++ P   E TS++ T      RRLSI+      D A  K R  + + P    P   ++  +I  N T     P+     P   +I +R     S S   A A P  G  +     S+ N  +   R  +   P    + T    S     APISRLVQMRKQR EKK
Sbjct:   12 NSTMAFPLPP---------PSPTAEACAELASLTVRVFSPAVVSSIRDIFVRNERLNVKEHLPLLGTLAVRHVALMMQEDDFNPDIRDKGEDESPQSPVLVKHESRIKNERMVDLDRMRSTPPLTRRLHREGKRTSSYRDIAYYAVRQKRIIPEALPTGREETSTATTAETRPVRRLSIRSIRLPKDSALRKTRSIAIIEPKSTPPDGKEDAKSIDENFTKRRHSPEFWKEKPGKENIHVRP----SVSSPSAGA-PAGGSLSSSRPPSLFNKESRNRRPNLSNTPGKSAQGTQGKISGRN--APISRLVQMRKQRLEKK 315          
The following BLAST results are available for this feature:
BLAST of Gchil8996.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITI7_9FLOR5.300e-7352.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEK4_CHOCR3.050e-1530.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:903945..904823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8996.t1Gchil8996.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 903945..904823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8996.t1 ID=Gchil8996.t1|Name=Gchil8996.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=293bp
MHSTNPTLASPLPADPTNFAFHNPQSIGQIWSELASITVSAFNPQLIARL
RTFIAQTPCFELENHLQMLGSIVVRHVTLCLSDTDPLSSSQPRKQSQPSL
SRSEMRTKRRSYRDIAYHAVRINRIVPQSQPLQVESTSSSITNIPRRLSI
QKAASLLDVAKKRPSSTVRPCEHTPSPTKENNNIIFNQTPNPSPPQQPTN
NPSIALREETLNSCSQSRAHAFPRAGVATFIESASMRNVTTPKSRQKVVA
QPQNLTEYTNRFKSDSKTAAPISRLVQMRKQRAEKKRHNPNN*
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