Gchil8961.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8961.t1
Unique NameGchil8961.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length293
Homology
BLAST of Gchil8961.t1 vs. uniprot
Match: A0A2V3IM05_9FLOR (PDZ domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM05_9FLOR)

HSP 1 Score: 360 bits (924), Expect = 7.150e-120
Identity = 187/291 (64.26%), Postives = 236/291 (81.10%), Query Frame = 0
Query:    2 VSDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQLFS 292
            V DD +MLQNRP+LDRA+VISAGV+ANL+LAWS++F S +++GVP Y +  GV++E VVDA GAAA AGI+AGD+IV V+GK +  S++S++ VA  IR S G+ +  G+ R   ++Q+ V PKCC  DGSS+MGVQLN+   ++R   A+++  VRS+N EF RLC QTW GL +TV NFE+SSKNLSGPIGVVS+GAQLAR D+ AL TFCAVISINLAVINALPLPALDGGQMVLL VE ++G+PVSLR+Q+AINR+ALLL LAFSG L VGDLERL+++ A+QQLF 
Sbjct:  169 VLDDENMLQNRPILDRAVVISAGVIANLILAWSAVFTSTAVIGVPTYMYAAGVRVENVVDAGGAAARAGIRAGDVIVAVNGKAVGASLESASHVAAQIRNSKGQALHLGVLREQQSVQIRVEPKCCLPDGSSVMGVQLNALAAVKRERPANVVQTVRSSNREFWRLCRQTWQGLVSTVGNFEESSKNLSGPIGVVSMGAQLARNDSWALLTFCAVISINLAVINALPLPALDGGQMVLLVVEGLKGSPVSLRVQEAINRSALLLLLAFSGALFVGDLERLHVLGAIQQLFG 459          
BLAST of Gchil8961.t1 vs. uniprot
Match: R7QMP1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMP1_CHOCR)

HSP 1 Score: 340 bits (871), Expect = 1.490e-111
Identity = 179/292 (61.30%), Postives = 225/292 (77.05%), Query Frame = 0
Query:    1 MVSDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQLFS 292
            +VSDD D+LQNRPL DRA+VISAGV+AN++LAW  IFAS+S +G+P Y+F  GV I  +VD  G  A AG++AGD+I+ VDG ++  S+DS+  VAE IRTS GR++ F I R      + +  KCCT +G++ MGVQL     + R    ++L  V +TN EF+RL  QTWNGL + VSNF++SS+NLSGPIGVVS+GA LAR D AAL TFCAVISINLA+IN+LPLPALDGGQM  L +E +RG PVSLR+QDAINRTALLLFLAFSGVLV GDLE+LNI++A+Q+LF 
Sbjct:  191 VVSDDPDLLQNRPLFDRALVISAGVIANVILAWGCIFASVSTVGLPTYNFSPGVNIANIVDTQGTGAKAGVKAGDVILRVDGNEVPKSLDSARVVAEKIRTSGGREMDFRILRGGKEFDMQIRAKCCTPEGNAAMGVQLIPNADVTRVRPPTVLKSVETTNKEFSRLSRQTWNGLTSIVSNFQKSSQNLSGPIGVVSMGADLARNDTAALLTFCAVISINLALINSLPLPALDGGQMTFLLIEALRGAPVSLRVQDAINRTALLLFLAFSGVLVFGDLEKLNILSAIQKLFG 482          
BLAST of Gchil8961.t1 vs. uniprot
Match: A0A7S2ZL78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL78_9RHOD)

HSP 1 Score: 286 bits (731), Expect = 4.440e-91
Identity = 150/290 (51.72%), Postives = 204/290 (70.34%), Query Frame = 0
Query:    3 SDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQLFS 292
            SD+ ++LQNRP+ DR +V+SAGV+AN+VLAW+S+F S+S  GVP   +  GV + +V+      A +GI  GD+I+ +DGK +     S+  VA  IRTS GR I+  ++R    + + V PKCC+ +G SL+GVQL  R  M R     L N +R+T  EF RL  +T  GL+  ++NF  ++KN+SGPIGVVS+GA LAR D A+L  FCA IS+NLA+IN+LPLPALDGGQMV L  E VRG+PVS R Q+A+NRTALL+FL FSG L++GD+ +LN++ +LQQLF 
Sbjct:  144 SDNPNLLQNRPVSDRVLVVSAGVIANIVLAWTSLFVSVSAFGVPTLEYRSGVVVTQVLGPESYGAKSGILPGDVILSMDGKAVQGGPGSAGDVASTIRTSEGRTIVMEMQRGQEVVNLDVKPKCCSPNGESLLGVQLQPRADMLRLKTTDLDNTLRTTTGEFMRLTNRTTTGLKDILTNFGDNAKNVSGPIGVVSMGADLARNDQASLLAFCAAISMNLAIINSLPLPALDGGQMVFLLAEAVRGSPVSTRWQEAVNRTALLMFLTFSGFLLLGDIAKLNLMKSLQQLFG 433          
BLAST of Gchil8961.t1 vs. uniprot
Match: M2XE49_GALSU (Membrane-associated zinc metalloprotease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XE49_GALSU)

HSP 1 Score: 241 bits (616), Expect = 1.940e-73
Identity = 132/284 (46.48%), Postives = 197/284 (69.37%), Query Frame = 0
Query:    5 DADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDG-SSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAAL 287
            D ++L NRP+  RAIVISAGV+AN+  AW S+F+S+S+ G+   SF  G  +  + + +G A+ AG+Q  D+IV + G+ +  S  S+  +A+ IR+S G+ +   I+R N    + + P+CC ++G ++L GV+L   + + R    S+ N +  T++EF R   Q + GL   V++F QSS  L+GPIGVVS+GA+LA+ DAA+LF+F A ISINLA+IN+LP+PALDGGQM+ L  E +RG P+ LR+QDA+NRTAL LFL  SG L++GDL+RL+I+ ++
Sbjct:  180 DPNLLSNRPVGQRAIVISAGVIANIFFAWISLFSSISIFGMAEPSFSPGAVVMNIQNLDGPASQAGLQPNDVIVELQGEPIPASGMSAKILADNIRSSGGKVLQITIKRGNEYRSIELKPECCNKNGEATLGGVELIPNMKISRQRPTSIWNSIELTHSEFVRFSGQVFGGLYRLVTHFRQSSSGLAGPIGVVSMGAELAKNDAASLFSFAAAISINLALINSLPIPALDGGQMLFLLWEAIRGVPLPLRVQDAVNRTALFLFLVASGFLLIGDLDRLHILPSI 463          
BLAST of Gchil8961.t1 vs. uniprot
Match: A0A7S1XGS5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGS5_9RHOD)

HSP 1 Score: 238 bits (607), Expect = 2.830e-72
Identity = 124/278 (44.60%), Postives = 186/278 (66.91%), Query Frame = 0
Query:    5 DADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLN 282
            D D+ QNRP+LDRAIVISAGV+AN++L+W ++F S++ +GVP  SF+ GV +  ++D NG  A+AG ++GD++V +DGKQ++ S  +   VA  IR S GR++ F ++RN + I++   PKCC   G S +G+QL+SR   Q    A++L+ ++ TN EF R+     +GL   VSN  +   +L GP+GV+ IGA + + D +AL  F A IS+NLAV+NALP P LDGGQM  L  E +RG+P+  + +D  ++   LLF+  S  L++GDL R++
Sbjct:  169 DPDLFQNRPVLDRAIVISAGVIANILLSWLALFGSVNSVGVPAMSFQPGVIVSGIIDQNGVGASAGFRSGDVLVELDGKQIVSSPTAPRDVAAIIRRSEGREMHFALDRNGNRIEITAQPKCCNAAGDSFLGIQLSSRGVAQVVKPANILDSIQMTNKEFNRILQVATSGLMGLVSNANRGG-DLVGPVGVIRIGADIVQNDLSALLIFIATISLNLAVVNALPFPVLDGGQMAFLLWETMRGSPLPQKAKDRASQITALLFILLSIQLLLGDLSRID 445          
BLAST of Gchil8961.t1 vs. uniprot
Match: A0A5J4Z0L9_PORPP (Putative zinc metalloprotease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0L9_PORPP)

HSP 1 Score: 231 bits (590), Expect = 1.990e-69
Identity = 133/289 (46.02%), Postives = 191/289 (66.09%), Query Frame = 0
Query:    4 DDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGL-RATVSNFEQSSKN---------LSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLN 282
            DD ++LQNRP+ DRAIV+SAGV+ANL LA+ +IF  ++L GVP + ++ GV I ++ D +G  A AG+   D+++ ++G  +  + DS++  A  IRTS    +   + R  +T  + V P+  T DG + +G+QL+S   + +    S+L+ +  TN+EF+RL TQTW GL R   S F     N         +SGPIGVVS+GA++AR DA+ALF FCAVIS+NLA+INALPLPALDGGQM  +  E + G PV  ++Q+ IN+TALL+FL  SG L+ GD+E+L 
Sbjct:  176 DDPNLLQNRPVRDRAIVVSAGVLANLALAYVTIFGGVTLNGVPSFEYQPGVVISQLADPSGPGARAGLLKNDVVLSINGLPIDRAQDSASVAANRIRTSRTDLLSMTVRRGENTFDLQVQPRR-TPDGDAKIGLQLSSNAVVTKRLPNSVLSALSMTNSEFSRLGTQTWTGLSRIASSTFNFGGANNASGGGVSSVSGPIGVVSMGAEIARTDASALFYFCAVISLNLAIINALPLPALDGGQMAFILAEGLSGRPVPQKVQNTINQTALLVFLLLSGSLIFGDIEKLG 463          
BLAST of Gchil8961.t1 vs. uniprot
Match: M1VAX0_CYAM1 (Probable membrane-associated zinc metalloprotease n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VAX0_CYAM1)

HSP 1 Score: 217 bits (552), Expect = 2.790e-64
Identity = 128/286 (44.76%), Postives = 180/286 (62.94%), Query Frame = 0
Query:    3 SDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVL-VTPKCCTRDGSSLMGVQL--NSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVA 285
            +DD D+LQNRPL+ RA+VI+AGV+AN+ LAW+ +F S+  +G P   FE GV +  + D +  AA AG++ GD+IV V+G+ L    +S+ + A  +R          IE   S  +V+ V P+         +GVQL  N++++ +R     L N V  TN EF      T NG     SN +++SK LSGP+GV SIGA++AR DA+ L  F AVIS+NL +INALPLPALDGGQM  L VE +RG P+   +++AIN TAL L L  SG L++GDLER+ +++
Sbjct:  146 NDDPDLLQNRPLMQRALVIAAGVLANIALAWTLLFTSVETVGAPRMQFETGVSVPALTDMSAPAAKAGLKPGDVIVAVNGQALAPGAESALEAANMLRRLAADPQHKPIELQLSDGRVVRVDPE------GGRIGVQLVPNAKVSRER---VPLRNAVPETNKEFVNTLRNTINGFITLFSNLKENSKELSGPLGVASIGAEIARHDASVLLQFAAVISLNLGIINALPLPALDGGQMAFLIVEAIRGKPLPRNLENAINGTALTLLLVMSGFLLIGDLERIQVLS 422          
BLAST of Gchil8961.t1 vs. uniprot
Match: A0A7J7ING4_9RHOD (PDZ domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ING4_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 8.190e-63
Identity = 128/284 (45.07%), Postives = 177/284 (62.32%), Query Frame = 0
Query:    3 SDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRT----SNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLN 282
            ++D ++LQNRPL  RA+VI+AGV+AN++LAW+ +F S+  +G P   FE GV +  +VD +  AA AG+ AGD+IV V+G++L    D++ + A  +R     ++ + I   ++ N   I+V  T           +GVQL     M R     L   V  TN EF      T NG  A  SN +++ K LSGP+GV S+GA++AR DAA LF F AVIS+NLA+INALPLPALDGGQM  L VE +RG P+   +++AIN TAL L L  SG L++GDLER+ 
Sbjct:  145 NEDPNLLQNRPLPQRALVIAAGVIANIILAWALLFTSVETVGAPRIQFEAGVSVPALVDVSTPAAQAGLAAGDVIVAVNGQELKAGPDAAQEAATLLRRLAADADHKPIELRLQ-NGKMIRVNPT--------GGRIGVQLVPNAKMWRER-VPLRYAVPETNKEFVNTLRNTLNGFVALFSNLKENGKELSGPLGVASMGAEIARHDAAVLFQFAAVISVNLAIINALPLPALDGGQMAFLIVEAIRGKPLPRGLENAINGTALTLLLVMSGFLLIGDLERIR 418          
BLAST of Gchil8961.t1 vs. uniprot
Match: U7QCL4_9CYAN (Zinc metalloprotease n=2 Tax=Lyngbya TaxID=28073 RepID=U7QCL4_9CYAN)

HSP 1 Score: 207 bits (528), Expect = 1.880e-61
Identity = 118/287 (41.11%), Postives = 177/287 (61.67%), Query Frame = 0
Query:    4 DDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVV-DANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQ 289
            DD D+L NRP+LDRAIVISAGV+ANL+ A+  + A + ++G+P +++  GV++ +V  D + AA  AGIQA D+I+ V+G+Q      +   +   I++   + +   ++R +  I + VTP+  + DG+  +GVQL     + R    +      S  NEF R+   T +G    +SNF Q+++ LSGP+G+V+IGA +AR DA  LF F A+ISINLA IN LPLPALDGGQ+  L +E +RG P+  R+Q+ + +T L+L L     L+V D   L  V +L Q
Sbjct:   78 DDPDLLSNRPILDRAIVISAGVIANLIFAYFLLVAQVGIIGIPEFNYSPGVRVPEVAADVSSAAQRAGIQANDVIISVEGEQFESGQQAIQDLILEIQSHPNQPLDLEVQRGDQVIPIEVTPEA-SNDGTGRIGVQLTHNRDVVRRRADNFFEAFSSGANEFQRIIGLTVSGFSQLISNFSQTAEQLSGPVGIVAIGADIARSDAGDLFQFAALISINLAFINILPLPALDGGQLAFLLIEAIRGKPLPSRLQEGVMQTGLMLLLGLGIFLIVRDTANLGWVRSLLQ 363          
BLAST of Gchil8961.t1 vs. uniprot
Match: B8HNK6_CYAP4 (Zinc metalloprotease n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HNK6_CYAP4)

HSP 1 Score: 206 bits (525), Expect = 6.050e-61
Identity = 119/293 (40.61%), Postives = 183/293 (62.46%), Query Frame = 0
Query:    1 MVSDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSFERGVKIEKVV-DANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIRTSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHNASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGAQLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPVSLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQLFS 292
            +  +D ++L+NRP+LDRAIVISAGV+ANLV A+  +   + +LGVP  +++ GV + ++  D + AAA AGI+AGDII+  +G+ L  S  +   + E IR + G+ I F I+R    + + VTP   + DG + +GVQL+   T+ R H  + + +  +   EF R+   T  G     S+F+Q++  +SGP+ +V++GA +AR DA  L  F A+ISINLA+IN LPLPALDGGQ+  L +E ++G P+  RIQ+ + +T L+L L     L+V D   L  +  +Q+LF 
Sbjct:   78 IAKNDPNLLRNRPVLDRAIVISAGVIANLVFAYLLLVTQVGILGVPQVNYQPGVVVPQLAADTSSAAAKAGIKAGDIILAANGEPLGASETALPHLMEVIRNNGGQPIAFKIQRQQQQLNLTVTPDV-SPDGKARIGVQLSPNGTVTRQHTLNPIAITGAAATEFERIVRLTLGGFVQLFSHFDQAANQVSGPVAIVAMGADIARSDATRLLQFAALISINLAIINILPLPALDGGQLAFLLIEALQGKPIPSRIQEGVMQTGLVLLLGLGMFLIVRDTVNLASMTWVQRLFQ 369          
The following BLAST results are available for this feature:
BLAST of Gchil8961.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM05_9FLOR7.150e-12064.26PDZ domain-containing protein n=1 Tax=Gracilariops... [more]
R7QMP1_CHOCR1.490e-11161.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZL78_9RHOD4.440e-9151.72Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XE49_GALSU1.940e-7346.48Membrane-associated zinc metalloprotease n=1 Tax=G... [more]
A0A7S1XGS5_9RHOD2.830e-7244.60Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z0L9_PORPP1.990e-6946.02Putative zinc metalloprotease n=1 Tax=Porphyridium... [more]
M1VAX0_CYAM12.790e-6444.76Probable membrane-associated zinc metalloprotease ... [more]
A0A7J7ING4_9RHOD8.190e-6345.07PDZ domain-containing protein n=1 Tax=Cyanidiococc... [more]
U7QCL4_9CYAN1.880e-6141.11Zinc metalloprotease n=2 Tax=Lyngbya TaxID=28073 R... [more]
B8HNK6_CYAP46.050e-6140.61Zinc metalloprotease n=1 Tax=Cyanothece sp. (strai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 41..115
e-value: 9.3E-5
score: 31.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 43..89
score: 10.1745
IPR041489PDZ domain 6PFAMPF17820PDZ_6coord: 59..113
e-value: 2.7E-11
score: 43.2
IPR008915Peptidase M50PFAMPF02163Peptidase_M50coord: 7..268
e-value: 1.8E-33
score: 116.0
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 57..144
e-value: 7.1E-14
score: 53.6
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 36..125
IPR004387Peptidase M50, putative membrane-associated zinc metallopeptidasePANTHERPTHR42837REGULATOR OF SIGMA-E PROTEASE RSEPcoord: 3..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 228..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..292
NoneNo IPR availableTMHMMTMhelixcoord: 257..276
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 207..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:442751..443629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8961.t1Gchil8961.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 442751..443629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8961.t1 ID=Gchil8961.t1|Name=Gchil8961.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=293bp
MVSDDADMLQNRPLLDRAIVISAGVVANLVLAWSSIFASMSLLGVPLYSF
ERGVKIEKVVDANGAAAAAGIQAGDIIVGVDGKQLLDSVDSSAQVAEYIR
TSNGRDILFGIERNNSTIQVLVTPKCCTRDGSSLMGVQLNSRITMQRNHN
ASLLNVVRSTNNEFTRLCTQTWNGLRATVSNFEQSSKNLSGPIGVVSIGA
QLAREDAAALFTFCAVISINLAVINALPLPALDGGQMVLLAVEFVRGTPV
SLRIQDAINRTALLLFLAFSGVLVVGDLERLNIVAALQQLFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR041489PDZ_6
IPR008915Peptidase_M50
IPR036034PDZ_sf
IPR004387Pept_M50_Zn