Gchil8928.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8928.t1
Unique NameGchil8928.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Homology
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BLAST of Gchil8928.t1 vs. uniprot
Match: R7QB67_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB67_CHOCR)

HSP 1 Score: 58.9 bits (141), Expect = 5.890e-8
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 0 
Query:    1 MAILWSSRIEDGTDAVAPEALKEKDAVGEGDDANADTAADDVAPADDAAQKAKDADSTDDSTAY-SRKMYKPELTESQLAGLLVALVFIILFVPGFMCLWRIQPPQSFD 108
            MA++W+SR + G    AP                AD  A    PA   A     ADS   + A  +  M  PE++ + L+GLLVAL+F+++FVPGF+CL RI  P++FD
Sbjct:  163 MAVVWASRQDAGAADAAP----------------ADQPAAGADPAKPDAVNGNTADSASGADATKAHVMNPPEISSAGLSGLLVALIFLLIFVPGFLCLTRIASPETFD 255
The following BLAST results are available for this feature:
BLAST of Gchil8928.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QB67_CHOCR5.890e-837.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..99
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:205748..206092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8928.t1Gchil8928.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 205748..206092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8928.t1 ID=Gchil8928.t1|Name=Gchil8928.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MAILWSSRIEDGTDAVAPEALKEKDAVGEGDDANADTAADDVAPADDAAQ
KAKDADSTDDSTAYSRKMYKPELTESQLAGLLVALVFIILFVPGFMCLWR
IQPPQSFDTATKMQ*
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