Gchil8916.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8916.t1
Unique NameGchil8916.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length141
Homology
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BLAST of Gchil8916.t1 vs. uniprot
Match: A0A2V3IK24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK24_9FLOR)

HSP 1 Score: 218 bits (554), Expect = 8.400e-71
Identity = 105/140 (75.00%), Postives = 118/140 (84.29%), Query Frame = 0 
Query:    1 MLAIPLATTISSLPIAIKAIGELHKATVLQSNALARQGLSTPDKRGEDERLSRQRAGGISGGFKEQAPSWERKVPSRAVAGDIRKDYEVGGLGNATSSRGNLVDILDKVPRKTHGNGDYKKINRPQPRRLPGFGNQSFGP 140
            M  +PL   +S++P+AIKA+GELH+ TVLQSN LARQGLS PDKRGED RLSRQRAGGISGG  ++ PSW  KVPS+ V GD+RK YEVGGLGNATSS+GNLVDILD VPRKT G  DYKKINRPQP+RLPGFGNQSF P
Sbjct:    1 MFVVPLVGAVSAIPVAIKAVGELHRITVLQSNTLARQGLSVPDKRGEDSRLSRQRAGGISGGLPKKEPSWAGKVPSKPVTGDLRKGYEVGGLGNATSSKGNLVDILDMVPRKTAGTSDYKKINRPQPKRLPGFGNQSFSP 140
The following BLAST results are available for this feature:
BLAST of Gchil8916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK24_9FLOR8.400e-7175.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:110874..111296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8916.t1Gchil8916.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 110874..111296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8916.t1 ID=Gchil8916.t1|Name=Gchil8916.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=141bp
MLAIPLATTISSLPIAIKAIGELHKATVLQSNALARQGLSTPDKRGEDER
LSRQRAGGISGGFKEQAPSWERKVPSRAVAGDIRKDYEVGGLGNATSSRG
NLVDILDKVPRKTHGNGDYKKINRPQPRRLPGFGNQSFGP*
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