Gchil887.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil887.t1
Unique NameGchil887.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length314
Homology
BLAST of Gchil887.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 213 bits (543), Expect = 2.670e-63
Identity = 117/316 (37.03%), Postives = 179/316 (56.65%), Query Frame = 0
Query:    2 KGHRVSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPCFALDSIILRPAPSGLALQEDFVSFKCVDFRGSSILLKPGNFSMEEERVKCSQAVVLEFDADSSKIPFEYPLEGSERSTLKNPAPNPLLHCSEGDCVVVRT---NSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFF--NASDLMPQIADRALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVISITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRGDPRIYSVYEEGQFVVYVS 312
            KGH VSV RHQ+R      +    F  IE++ S+ SDPA + T   QPC A++++  R    G +L+E  +   CV    S+I L+ GN+SME  +V+C+++  L F  +        P+  +   + +NP P+PLL C++G CVV++T    SS   T +  S  F    +S L+   + +  L T +F   N ++L+P+ A+R L+A+  N+N P EL R +++GSE   C F R    AT++P  +IV +S  W++S   + ++ +L   VFYDISNP+HWAKRT     E + GDP +  V E G  V+YVS
Sbjct:   44 KGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPH---VSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRT-SEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENGHHVMYVS 355          
BLAST of Gchil887.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 4.640e-49
Identity = 111/334 (33.23%), Postives = 171/334 (51.20%), Query Frame = 0
Query:    2 KGHRVSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPCFALDSIILRPAPSGLALQEDFVSFKCVDFRGSSILLKPGNFSME---EERVKCSQAVVLEFDADSSKIPFEYPLEGSERSTLKNPA------PNPLLHC------------SEGDCVVVRT--NSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFFNASDLMPQIADRALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVISITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRGDPRIYSVYEEGQFVVYVS 312
            KG +VSV  H+ R    + +A++ F+ +EVI S+ SDPA         C A+D I LR   +G    EDF+  +C+  +    L + GNFS+    + RV+C +  +           +EYP E   + TL N         + +L C            +E  C  VR    +S+  T + LS   +E+ +  L   +  +P L T V +N S L    A R L A+ ++V  P+E+ +R++MG E   C F+      T +PL L+  I   W+LSFL +  + +LR S+FYD+S+P+HWA+RT   I E I G+P + SVYE G+ ++YVS
Sbjct:   44 KGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHAL-----------YEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGERLMYVS 366          
BLAST of Gchil887.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 3.500e-24
Identity = 84/323 (26.01%), Postives = 147/323 (45.51%), Query Frame = 0
Query:    3 GHRVSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPCFALDSIILRPAPSGLALQEDFVSFKCVDFRGSSILLKPGNFSM-----------EEERVKCSQAVVLEFDADSSKIPFEYPLEGSERSTLKNPAPNP-LLHCSEGDCVVV-RTNSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFFNASDLMPQIADRALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVISITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRGDPRIYSVYEEGQFVVYVS 312
            G +V+V  H+ R    +  A L F+ +EV +S+ SDP D+  + ++ C +LD++ ++     ++ Q   V  KC+    +      GN S            ++E  +C +  VL + A+  + P E             P P+  ++ C    CV V R+ + V  T    S      ++S +      +P+  T + +N + L    A RA++   + V     L R ++ GS  T C F +    AT++    I  I I W LS   ++ SF +R  +FYD+S+P+HWA++T          +P + +VYE G   + V+
Sbjct:   45 GGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVL-YTANVERAPDE-------------PVPDEYVVGCVGTSCVFVYRSGNEVTFTDFVHS-----EDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNF-KTFSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLVT 347          
BLAST of Gchil887.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 1.480e-22
Identity = 84/313 (26.84%), Postives = 142/313 (45.37%), Query Frame = 0
Query:    3 GHRVSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPCFALDSIILRPAPSGLALQEDFVSFKCVDFRGSSILLKPGNFSMEEERVKCSQAVVLEFDADSSK---IPFEYPLEGSERSTLKNPAPNPLLHCSEGDCVVVRTNSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFFNASDLMPQIADRALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVISITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRGDPRIYSVYEEGQFVVYVS 312
            G RV+V  H+ R    +  A L F+ +EV  S+ SDPA +R    + C +LD++ +R     ++L+   V   C+    S +    GN S + E +KC    +   D   S    +P E+ +E              +L      C  + +N S E T   + L   + +LS +      + +  T V++N + +  ++  R++   R  V     L R ++ G+EET C FD     AT I    +  I++ W LS   ++ S  +R  VFYD+S+P+ WA++T          +P + + YE G   V V+
Sbjct:   45 GGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNISDDGE-IKCGDDFLFSADIHHSPNEPVPDEHTMEC-------------ILDGELNLCAFLYSNGS-EVTFTEIVL---DTDLSFVLDNNYALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFD-VFSPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLVT 338          
BLAST of Gchil887.t1 vs. uniprot
Match: A0A2V3IN83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN83_9FLOR)

HSP 1 Score: 79.3 bits (194), Expect = 5.050e-13
Identity = 72/301 (23.92%), Postives = 131/301 (43.52%), Query Frame = 0
Query:    6 VSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPCFALDSIILRPAP-----SGLALQEDFVSFKCVDFRGS-----SILLKPGNFSMEEER--VKCSQAVVLEFDADSSKIPFEYPLEGSERSTLKNPAPNPLLHCSEGDCVVVRTNSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFFNASDLMPQIADRALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVISITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRG 294
            VS+  H  R  L   +A+L F+ +E + S  +        +   C  +D   LR +      S L  +E+ V   CV    +     +I + PGN+S   E+  V CS   ++           +Y L+   +  L+   PN   HC  G CV +    S ES V   S     A  +   +         T+    A   +   A   L  +++ +   +++ R+++M +E   C         T +P  LI + +++W  S +++ ++ VL++ +FY+IS+P+HW +RT ++  E + G
Sbjct:   61 VSIKSHSLRWRLIPVVAMLMFIALETLVSVHTKTHIHHVKNSHKCVQVD---LRTSEALEVESSLNKEEEAVMLNCVKMTPAEDANFNIEVYPGNYSRSGEKIFVDCSADWLM-----------KYKLDTKGKGILE---PNAEQHCRNGFCVFLY---SQESKVF-FSPPLPSARFNHTNEYTG----YWTEFIPGAVPSLNSTATYLLLLYQKGILEEIQIRRKLFMSAERGQCEMTNGSKEHTLVPYWLISITALSWFCSAILFALTRVLKSGIFYNISDPLHWTRRTYWAFNEGVDG 336          
The following BLAST results are available for this feature:
BLAST of Gchil887.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5A0_9FLOR2.670e-6337.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT05_9FLOR4.640e-4933.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C2_9FLOR3.500e-2426.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR1.480e-2226.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN83_9FLOR5.050e-1323.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..242
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..313
NoneNo IPR availableTMHMMTMhelixcoord: 243..265
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:895072..896013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil887.t1Gchil887.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 895072..896013 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil887.t1 ID=Gchil887.t1|Name=Gchil887.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=314bp
MKGHRVSVHRHQHRVGLFSGIALLTFLVIEVITSYLSDPADRRTVSQQPC
FALDSIILRPAPSGLALQEDFVSFKCVDFRGSSILLKPGNFSMEEERVKC
SQAVVLEFDADSSKIPFEYPLEGSERSTLKNPAPNPLLHCSEGDCVVVRT
NSSVESTVIRLSLNFKEANLSELRKTRAKVPILVTKVFFNASDLMPQIAD
RALEAFRRNVNTPLELNRRIYMGSEETLCPFDRNLGAATQIPLSLIVVIS
ITWLLSFLVWIVSFVLRTSVFYDISNPIHWAKRTKFSIGEEIRGDPRIYS
VYEEGQFVVYVSD*
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