Gchil8858.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8858.t1
Unique NameGchil8858.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Homology
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A2V3J5G9_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G9_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 7.710e-80
Identity = 142/228 (62.28%), Postives = 162/228 (71.05%), Query Frame = 0
Query:   93 RLTNCELLISVLECYMTLQIRHNQSLETNQSSSLVKQHHVRQEHCLALKTNQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVLSCEDSQFAVLHERLRNMGYA----PDEH--------LPPCSPVSSLDD 308
            RL++C+LLISVL+CYMTL IR N +  T Q   L  Q               EPSVFHALQ PSITP EYLRRL+RYAFCSRS FI+AFYYL KIA     +L VN+LS+HRLLLTATLLATKM+DD+LYDNAHFAKVGGLD+ ELN L   ML++L FEL VS +QFE FE+ VL  VL C DS + VLHERLRNMGYA    P +         LPPCSPVSS+DD
Sbjct:   62 RLSSCDLLISVLDCYMTLHIRANSATATPQ---LCNQPSSSXXXXXXXXPASEPSVFHALQAPSITPSEYLRRLSRYAFCSRSVFIVAFYYLHKIAQKRSLNLCVNALSVHRLLLTATLLATKMMDDVLYDNAHFAKVGGLDVAELNMLXXXMLHMLQFELVVSTDQFERFEKRVLTHVLHCHDSSYFVLHERLRNMGYAVSAEPQQKVHQQRVHSLPPCSPVSSIDD 286          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A7S1EV37_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EV37_9RHOD)

HSP 1 Score: 130 bits (327), Expect = 2.450e-32
Identity = 65/152 (42.76%), Postives = 103/152 (67.76%), Query Frame = 0
Query:  147 SVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVL-----SCEDSQFAVLHERLRNMGYAP 293
            S FH L+PP ++  +YL+R+ RY+FCSRS  ILA Y++D+++    +  ++ +L++HRL +TA LLA K  +D+LYDN HF+KVGG+ ++ELN +EL ML  L++EL VS + +  FERS+L++V+     SC + Q  +L     ++   P
Sbjct:   48 SEFHGLEPPRVSLHDYLQRIDRYSFCSRSCHILALYFVDRLSK-RSSCFRITALNVHRLYITAFLLAVKSSEDVLYDNLHFSKVGGIYLRELNLMELKMLEELNYELFVSPDSYREFERSILDEVVKSSDYSCIEPQLLLLQSGFHSVNREP 198          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A5J4Z087_PORPP (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z087_PORPP)

HSP 1 Score: 122 bits (307), Expect = 1.370e-29
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 0
Query:  147 SVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDV 271
            S FH L+ P +  ++YL R+ +YAFCSRS F++A  YLD IA +   + ++ + ++HRL LTA +LA K  +D+ YDNAHFAKVGG+ +QELN +EL+ L  L F + VS +QF A  RS++ +V
Sbjct:   63 SEFHGLEVPKVLLLDYLHRIEKYAFCSRSCFVVALVYLDWIA-MVDCTYRLTAFNVHRLFLTALVLAVKFCEDVFYDNAHFAKVGGITVQELNRMELEFLKALEFRMHVSEDQFAACARSMIEEV 186          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A7S0T842_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T842_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 4.830e-29
Identity = 72/186 (38.71%), Postives = 112/186 (60.22%), Query Frame = 0
Query:  110 LQIRHNQSLETNQSSSLVKQHHVRQEHC----LALKTNQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVLSCEDSQFAVLHERLRNMGY 291
            LQ+R  QS   ++SS+  K H           L   TN+  + F A   P+I+  +Y  R+A+YAFCS +  ++AF Y+++ A+  Q SL+++  ++HRL++TA +LA K  DD+ Y+NA++AKVGG+ +QE+N LE + L  + FEL VS E+F  FE  V+++VLS   S  A     L   G+
Sbjct:   39 LQVRLEQSRVYSESSNNTKSHXXXXXXXXXXXLPSNTNRRLTCFDASSLPAISACDYFHRVAKYAFCSPACLMMAFIYIERGASY-QPSLRLSPTNVHRLIITAVMLAAKFFDDVYYNNAYYAKVGGIPLQEINLLETEFLMAVGFELFVSEEEFIRFETDVVDEVLSDRTSLCADARRLLSQNGF 223          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A5J4YNB6_PORPP (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNB6_PORPP)

HSP 1 Score: 120 bits (301), Expect = 2.630e-28
Identity = 55/126 (43.65%), Postives = 87/126 (69.05%), Query Frame = 0
Query:  147 SVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVL 272
            ++FHA  PP I+PVEY+ R+ +YAFCS S FI A  YL++I     ASL++++ + HRL +T+ +LA K  DD+ Y+N ++++VGG+ + E+N LEL+ L  L+FEL +  E+F  FE  ++ + L
Sbjct:  116 TLFHAATPPPISPVEYMHRVFKYAFCSSSCFIAALAYLERIRR-HNASLRLSNTNFHRLWITSVMLAAKFFDDVYYENTYYSRVGGISLDEMNALELEFLRTLNFELFIQPEEFSQFENELIGETL 240          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A6J0JM60_RAPSA (Cyclin n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0JM60_RAPSA)

HSP 1 Score: 115 bits (287), Expect = 2.450e-27
Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 0
Query:  143 NQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAF 263
            +Q  SVFH L  PSIT   YL R+ +YA CSRS F++A+ YLD+  +  Q SL +NSL++HRLL+T+ +++ K +DD  Y+NA++AKVGG+  +E+N LELD L  L F+L V+   F ++
Sbjct:   38 SQRVSVFHGLSLPSITIQSYLERIFKYAHCSRSCFVVAYVYLDRFTH-RQPSLPINSLNVHRLLITSVMVSAKFLDDRYYNNAYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHSY 157          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A7J7CDM3_TRIWF (Cyclin-U4-1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CDM3_TRIWF)

HSP 1 Score: 116 bits (291), Expect = 3.330e-27
Identity = 65/143 (45.45%), Postives = 91/143 (63.64%), Query Frame = 0
Query:  147 SVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVLSCEDSQFAV-----LHE 284
            SVFH L  P I+   YL R+ +YA CS+S F++A+ YLD+ A   Q SL +NS ++HRLL+T+ L++ K +DDI YDNA++AKVGG+   E+N LELD L  L FEL V+   F+ +   +  ++L     Q AV     LHE
Sbjct:  104 SVFHGLTRPPISIQSYLERIFKYANCSQSCFVVAYVYLDRFAQ-KQPSLPINSFNVHRLLITSVLVSAKFMDDIYYDNAYYAKVGGISTTEMNLLELDFLFGLGFELNVTPNTFQTYCSFLQREMLMQSPPQLAVELEPPLHE 245          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A0D3B6R2_BRAOL (Cyclin n=4 Tax=Brassica TaxID=3705 RepID=A0A0D3B6R2_BRAOL)

HSP 1 Score: 114 bits (285), Expect = 4.810e-27
Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 0
Query:  143 NQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAF 263
            +Q  SVFH L  PSIT   YL R+ +YA CS S F++A+ YLD+  +  Q SL +NS ++HRLL+T+ + A K +DD+ Y+NA++AKVGG+  +E+N LELD L  L F+L V+   F A+
Sbjct:   38 SQSNSVFHGLSRPSITIQSYLERIYKYANCSSSCFVVAYVYLDRFTH-RQPSLPINSFNVHRLLITSVMTAAKFLDDLYYNNAYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAY 157          
BLAST of Gchil8858.t1 vs. uniprot
Match: CCU41_ARATH (Cyclin-U4-1 n=25 Tax=Brassicaceae TaxID=3700 RepID=CCU41_ARATH)

HSP 1 Score: 114 bits (285), Expect = 5.340e-27
Identity = 58/121 (47.93%), Postives = 84/121 (69.42%), Query Frame = 0
Query:  143 NQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAF 263
            +Q  SVFH L  P+IT   YL R+ +YA CS S F++A+ YLD+  +  Q SL +NS ++HRLL+T+ ++A K +DD+ Y+NA++AKVGG+  +E+N LELD L  L FEL V+   F A+
Sbjct:   38 SQRVSVFHGLSRPTITIQSYLERIFKYANCSPSCFVVAYVYLDRFTH-RQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAY 157          
BLAST of Gchil8858.t1 vs. uniprot
Match: A0A1S3VD67_VIGRR (Cyclin n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3VD67_VIGRR)

HSP 1 Score: 114 bits (284), Expect = 6.740e-27
Identity = 63/157 (40.13%), Postives = 99/157 (63.06%), Query Frame = 0
Query:  124 SSLVKQHHVRQEHCLALKTNQEPSVFHALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSLSIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLHFELCVSAEQFEAFERSVLNDVLSCEDSQFA 280
            SS++++     +H   L+   + SVFH L  P+I+   YL R+ +YA CS S FI+A+ YLD+     Q SL +NS ++HRLL+T+ ++A K +DD+ Y+NA++AKVGG+  +E+N LELD L  L F + VS   FEA+   +  +++  +   FA
Sbjct:   18 SSMLEKVAESNDHNQKLQQQHKISVFHGLTRPNISIQNYLERIFKYANCSPSCFIVAYVYLDRFTQ-RQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISKREMNVLELDFLFGLGFHMNVSPGSFEAYCVHLQREMVLMQPLSFA 173          
The following BLAST results are available for this feature:
BLAST of Gchil8858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5G9_9FLOR7.710e-8062.28Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S1EV37_9RHOD2.450e-3242.76Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z087_PORPP1.370e-2948.00Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A7S0T842_9RHOD4.830e-2938.71Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YNB6_PORPP2.630e-2843.65Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A6J0JM60_RAPSA2.450e-2747.93Cyclin n=1 Tax=Raphanus sativus TaxID=3726 RepID=A... [more]
A0A7J7CDM3_TRIWF3.330e-2745.45Cyclin-U4-1 n=1 Tax=Tripterygium wilfordii TaxID=4... [more]
A0A0D3B6R2_BRAOL4.810e-2747.93Cyclin n=4 Tax=Brassica TaxID=3705 RepID=A0A0D3B6R... [more]
CCU41_ARATH5.340e-2747.93Cyclin-U4-1 n=25 Tax=Brassicaceae TaxID=3700 RepID... [more]
A0A1S3VD67_VIGRR6.740e-2740.13Cyclin n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3VD67_V... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 117..253
e-value: 1.4E-28
score: 100.3
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 99..270
NoneNo IPR availableGENE3D1.10.472.10coord: 87..290
e-value: 3.1E-40
score: 140.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..60
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 153..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:47015..47959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8858.t1Gchil8858.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000120_pilon 47015..47959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8858.t1 ID=Gchil8858.t1|Name=Gchil8858.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MLPLNSLKQTAHLRRAAATITTHNHSLVAPTTTTTAHHDTQSTILYSHRK
HPSVYSDSSSTQAASAQSIIHSSSSFDDRLSSSLSPVHSKKSRLTNCELL
ISVLECYMTLQIRHNQSLETNQSSSLVKQHHVRQEHCLALKTNQEPSVFH
ALQPPSITPVEYLRRLARYAFCSRSAFILAFYYLDKIANLPQASLKVNSL
SIHRLLLTATLLATKMVDDILYDNAHFAKVGGLDMQELNTLELDMLNVLH
FELCVSAEQFEAFERSVLNDVLSCEDSQFAVLHERLRNMGYAPDEHLPPC
SPVSSLDDFTSSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf