Gchil8667.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8667.t1
Unique NameGchil8667.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length659
Homology
BLAST of Gchil8667.t1 vs. uniprot
Match: A0A2V3IQL3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQL3_9FLOR)

HSP 1 Score: 749 bits (1933), Expect = 2.120e-263
Identity = 395/649 (60.86%), Postives = 469/649 (72.27%), Query Frame = 0
Query:   10 SPPSPPRHAPPPAQPRGAFILSHWIPFDIWSRIAACLTSVSDLNSFLKVCRAAYYAVCTAQAPHHKSVCHLFCRRQFRIPVDMTDKVIIAHVVPPDGHSLVMFLDETQSGNGVQLAWIRDACIRRVQLGLDTVSASTVTNIRFSPDGSRIAFLITLAHGNLIPEHHDPLHRLRGWESSTEIRGQLHDVTYEPCEDCTVQTVSLVADSLGFPHDLVVHTFTHVFVPEYGFDMVWRGTKQQPELAFAAMLHSTAGAATYLVRWKSFATPSESNFVFMACIDGASIELLHDRRFAMLNFESTRCTSRIELGMDARFIFFDTISKFGVLRFDQVDDAESTKVTRADLPNDP-ITSRSYC-----------------------IPSAVKSGSGEVQRHDRVRQSAQESDKCRLRPHNAWAHHGSLNDEVARTSRMAPNGKLLCSVVCIHCGPHGKNGKRISQRHIEMRSSVSGRLLYRQVIPPTFRTALSTTKRVRIAYEKSDDVARCTIGFSEDSCLLFIWDTLFTNAEVEASKRLPHVYEAETGRLVQDFNRIASTVSYDQIQTAPDGLTLYGTRWAKARVNMDAIDVISGFVLKTEVMTENLAAPAHYSCDSVYILPDKNLVAMSRGKLDSFWETTRGSLGCRWESERRRV 634
            +PPSPPRH    +QPRGAFI SHWIPFDIW RIA+ +TS+SDL SFL VCRAA  AVC  QAP H+SV H F    F IP D+ DKV + HVVPP G SL++F+D+  S NGV LAW+R + +RR+ LGLD V ASTVTNIRFSPDG+RIAFLITLAHG LI E  DPLHRLRGWES TEI G+  D+T  PCEDCTVQ   L AD LGFPHDLV+HTFTHVFVPEYGFDMVWRGT  +PELAFAAMLHS+AGAATYLVRWK+FA+P+ESNFVFMA IDGASI+L+HD+R AML+++STRCTSRIE+G DA+ IFFDT SKFGVLRFDQVDDA S++VTRADLPN+P I  RS C                       +    + G    Q H     + + S + R R  +     GS + +VARTSRM+P+G LLCSV+C       K+G+R   R IEMRS+++GRLLYR  IP   RT L   K     +EKSD VAR TI FS DS L+ IWDT F++  V  SKRLP+VYE ETGRLVQDF  I ST++YDQ+QTAPD LT+YGTR ++ R+ MDAIDV+SG VLKTE +T +L  P  ++   V+  P++ L  MSRG LD+ WETTRG LGC W+SERR V
Sbjct:   12 APPSPPRHNRASSQPRGAFISSHWIPFDIWPRIASYITSISDLTSFLHVCRAAQKAVCLTQAPRHQSVRHNFRLCTFYIPTDLLDKVRMVHVVPPHGESLILFVDDPSSSNGVDLAWLRGSRLRRISLGLDAVPASTVTNIRFSPDGTRIAFLITLAHGALIAEGLDPLHRLRGWESQTEIFGETFDITCHPCEDCTVQIADLEADDLGFPHDLVLHTFTHVFVPEYGFDMVWRGTSDKPELAFAAMLHSSAGAATYLVRWKTFASPNESNFVFMAVIDGASIDLIHDKRHAMLSYKSTRCTSRIEIGEDAQIIFFDTTSKFGVLRFDQVDDAASSRVTRADLPNNPFINPRSSCAMGMEPQYSEQGDSSRGLHRVRTVQRTYREGCLSKQLHAGNSLTNRTSGRARARGDDM----GSPDHDVARTSRMSPDGMLLCSVICNPNARIFKSGRRSPHRLIEMRSTLTGRLLYRHHIPRPRRT-LRIPKHDSTPFEKSDYVARRTITFSNDSRLVLIWDTYFSSVVVSTSKRLPYVYEVETGRLVQDFCAIGSTIAYDQVQTAPDALTVYGTRVSRNRIVMDAIDVLSGLVLKTEPLTGDLMVPTCFAGHFVFTFPNQKLAIMSRGWLDTLWETTRGYLGCGWKSERRCV 655          
BLAST of Gchil8667.t1 vs. uniprot
Match: R7QGL7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGL7_CHOCR)

HSP 1 Score: 504 bits (1298), Expect = 1.930e-168
Identity = 278/615 (45.20%), Postives = 383/615 (62.28%), Query Frame = 0
Query:   26 GAFILSHWIPFDIWSRIAACLTSVSDLNSFLKVCRAAYYAVCTAQAPHHKSVCHLFCRRQFRIPVDMTDKVIIAHVVPPDGHSLVMFLDETQSGNGVQLAWIRDACIRRVQLGLDTVSASTVTNIRFSPDGSRIAFLITLAHGNLIPEHHDPLHRLRGWESSTEIRGQLHDVTYEPCEDCTVQTVSLVADSLGFPHDLVVHTFTHVFVPEYGFDMVWRGT---KQQPELAFAAMLHSTAGAATYLVRWKSFATPSESNFVFMACIDGASIELLHDRRFAMLNFESTRCTSRIELGMDARFIFFDTISKFGVLRFDQVDDAESTKVTRADLPNDPITS--RSYCIPSAVKSGSGEVQRHDRVRQSAQESDKCRLRPHNAWAHHGSLNDEVA-------RTSRMAPNGKLLCSVVCIHCGPHGKNGKRISQ-RHIEMRSSVSGRLLYRQVIPPTFRTALSTTKRVRIAYEKSDDVARCTIGFSEDSCLLFIWDTLFTNAEVEASKRLPHVYEAETGRLVQDFNRIASTVSYDQIQTAPDGLTLYGTRWAKARVNMDAIDVISGFVLKTEVMTENLAAPAHYSCDSVYILPDKNLVAMSRGKLDSFWETTRGSLGCRW 627
            GA     WIP D+W+R++A +  V   ++   VC AA   V  A+A   +++   F  R + +P  + D+V++ H +   G  LV+F+DET  G+GV++AW++   ++ + LGL+ V AS  TNIRF+PDG  +A L+TLAHG ++ E+ DPL RLRGW    +       + Y PCEDCTVQ V  +    G   DLV+HTF+HVFVPEYGFDMVWRG+     + ELAFAAMLHS  GAATYLVRWK+F  P  SNF+FMACIDGA  E+L D+R AML    T CTSRIEL  DAR IFFDT+SKFG+LRFDQVD+    KVTRADL N PI+   R+  +P   + G  E   H   R S   +   ++RP  ++A +G      A       R +RM+P+G LLCSV+        + G R ++ +H+EMRSS+ GRLL+R VI    +  L   K  R+  EKS D+A  T+ FS+DS LL +WD   T+   E    LP V ++ TG  +QDF  ++S V Y+ +Q + DG  +YGTR A+ R+ MDA+DV++G VLKT  +T  +  P  +S  SVY++P++ +  ++RG+L+  WE++RGS GC W
Sbjct:    7 GARACGQWIPADVWARLSAFVRDVPAQHALRLVCPAAAAGVADARAAFLQTLRKTFRLRAYSLPDSLADRVLMVHPMAGGGEGLVLFVDETDIGSGVEIAWLQSGSLKSIALGLEAVPASAATNIRFAPDGRSVAMLVTLAHGTMVEENTDPLKRLRGWPVVEDC------IEYTPCEDCTVQVVDFLYPERGRSRDLVLHTFSHVFVPEYGFDMVWRGSAGKSDRQELAFAAMLHSDDGAATYLVRWKTFRNPRTSNFIFMACIDGACKEMLWDKRNAMLRSPHTICTSRIELAKDARHIFFDTMSKFGILRFDQVDNPSVAKVTRADLDNTPISPVLRAPPLPKIAR-GRHEACCH---RDSPSGTPVPKMRP--SFATYGDHQRRAAKVLNNATRIARMSPDGSLLCSVIDTFRSNGERRGLRSTRLKHVEMRSSLCGRLLFRNVI--VRQPDLCCQKPDRLELEKSGDIAHNTLSFSDDSSLLVVWDAFLTSTVCEVYHTLPLVLDSRTGGTIQDFEELSS-VRYEGMQMSSDGQIIYGTRMAEDRIVMDAVDVLTGRVLKTVNVTGQVHRPPAFSAHSVYLMPNRYIHTVARGQLEVLWESSRGSAGCGW 606          
The following BLAST results are available for this feature:
BLAST of Gchil8667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQL3_9FLOR2.120e-26360.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGL7_CHOCR1.930e-16845.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:1104283..1106259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8667.t1Gchil8667.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 1104283..1106259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8667.t1 ID=Gchil8667.t1|Name=Gchil8667.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=659bp
MSSNDPGPSSPPSPPRHAPPPAQPRGAFILSHWIPFDIWSRIAACLTSVS
DLNSFLKVCRAAYYAVCTAQAPHHKSVCHLFCRRQFRIPVDMTDKVIIAH
VVPPDGHSLVMFLDETQSGNGVQLAWIRDACIRRVQLGLDTVSASTVTNI
RFSPDGSRIAFLITLAHGNLIPEHHDPLHRLRGWESSTEIRGQLHDVTYE
PCEDCTVQTVSLVADSLGFPHDLVVHTFTHVFVPEYGFDMVWRGTKQQPE
LAFAAMLHSTAGAATYLVRWKSFATPSESNFVFMACIDGASIELLHDRRF
AMLNFESTRCTSRIELGMDARFIFFDTISKFGVLRFDQVDDAESTKVTRA
DLPNDPITSRSYCIPSAVKSGSGEVQRHDRVRQSAQESDKCRLRPHNAWA
HHGSLNDEVARTSRMAPNGKLLCSVVCIHCGPHGKNGKRISQRHIEMRSS
VSGRLLYRQVIPPTFRTALSTTKRVRIAYEKSDDVARCTIGFSEDSCLLF
IWDTLFTNAEVEASKRLPHVYEAETGRLVQDFNRIASTVSYDQIQTAPDG
LTLYGTRWAKARVNMDAIDVISGFVLKTEVMTENLAAPAHYSCDSVYILP
DKNLVAMSRGKLDSFWETTRGSLGCRWESERRRVPFCVKCDSIVMRKQPS
ISEISELN*
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