Gchil8657.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8657.t1
Unique NameGchil8657.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length505
Homology
BLAST of Gchil8657.t1 vs. uniprot
Match: A0A2V3J3C4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C4_9FLOR)

HSP 1 Score: 553 bits (1426), Expect = 3.460e-191
Identity = 294/547 (53.75%), Postives = 372/547 (68.01%), Query Frame = 0
Query:    6 MRVAILGGNLLGCATAFYTRRVRPNARIEIFERRRQLGGNKFATVQNVVVGSAASADVASAPLFSALLNDAQVSLDAQKRRAEWALFDWKQDSIRLSRTHSRWIRKLLASNIAPALLQLVALCISLYFASAFYSRSSPFLRYAHRTGY--YVHYPSILLFANAAALGFGLIPMRLMLRFWNYLLYVFRIRMVASITYGGESLAVLSSVISQMHQHLSTIQKHNAASSCVTLGHLLSACGFGKYVKQPATRYLSHFRLHPSILDDAIYPCFSQPYADSNVTPNMNALAMLL----------------------------------------------EVVKTSSGWECFSVGDNAERESLGTFDAVILAAVIDPSRFSVSGLQEHLTESLALSAKLKETGAQKSDVNVARYTAIVKGALNASYFRMSSPNDLPTSVTVVNSVNCSEIQRIEPDTWRIVTGEEPSRTSNAIRLLFTSVESIFVYEHPKRPYSCAPLPELNDSHAPSLILGNRFLNAACVDRVANDINLDCLSAINVASFFDDEVATWKE 504
            MRVAI+GGNLLGCATAFYTR+  P+A I IFERR +LGGNK AT  + ++GSA + DV+SAPLF  LL+ A++ L     RA+WALFD K DS +LS   S  +R  + S + P LLQL +L  + +F +AF   ++PFLRYA  T     +H+P++ LFA  A   FGL+P  LMLR +N+L +VF +R++A+ITYG ES+AVLSSVI+ MH HLS I KH+AASSCVTLGHLLSACG GKYVKQ +T + S +RLHP +L D I+P     YADS    + +ALA+LL                                              +V K+S  W  F+  +++E+ SLG +DAVILAAV+DPSRFS  GL EHL ESLAL+A+L +    ++ +NVA+YTAIVKG +NA Y R SSP+ LPT  TV+NSVNC+EIQR+EPD WR+VTGE P++ SN I  LF SV+SI  Y++P+RPY CA L EL+ SHAP+ ILG RFLNAACVDRVAND NLDCLSA+N ASFF + VA WKE
Sbjct:    1 MRVAIIGGNLLGCATAFYTRKANPHAHIHIFERRSRLGGNKLATRAHALLGSACTTDVSSAPLFLHLLSQARIKLTCSPVRAQWALFDLKLDSYKLSSMPSLLLRYCIHSRVIPILLQLASLSATAFFVNAFSRGTNPFLRYARSTPTPTVLHFPTLALFAACATFAFGLVPSPLMLRLFNFLFFVFWVRLIAAITYGAESIAVLSSVINHMHNHLSAIVKHDAASSCVTLGHLLSACGLGKYVKQSSTAFFSKYRLHPELLPDTIHPALVHTYADSTAPRDASALAVLLAMLAKSPLPASQRSTPTILSSTDADSICPALATASSAHLTMNTYVTDVRKSSDRWHLFTQSNHSEKLSLGEYDAVILAAVVDPSRFSAHGLGEHLAESLALTAELSDKSTSRTTLNVAKYTAIVKGVINADYLRKSSPSALPTFTTVLNSVNCTEIQRLEPDVWRVVTGERPTKDSNVIATLFQSVQSIISYDNPQRPYGCAALEELDGSHAPTFILGTRFLNAACVDRVANDFNLDCLSAMNTASFFKEGVAIWKE 547          
BLAST of Gchil8657.t1 vs. uniprot
Match: R7QPA9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPA9_CHOCR)

HSP 1 Score: 280 bits (717), Expect = 3.820e-84
Identity = 193/591 (32.66%), Postives = 289/591 (48.90%), Query Frame = 0
Query:    6 MRVAILGGNLLGCATAFYTRRVRPNAR---------------------------------IEIFERRRQLGGNKFATVQ----NVVVGSAASADVASAPLFSALLNDAQVSLDAQKRRAEWALFDWKQDSIRLSRTHSRWIRKLLASNIAPALLQLVALCISLYFASAFYSRSS--PFLRYAHRTGYYVHYPSILLFANAAALGFGLIPMRLMLRFWNYLLYVFRIRMVASITYGGESLAVLSSVISQMHQHLSTIQKHNAASSCVTLGHLLSACGFGKYVKQPATRYLSHFRLHPSILDDAIYPCFSQPYADSNVT--PNMNALAMLL-----------------------------EVVKTSS-----GWECFSVGDNAERE---------------SLGTFDAVILAAVIDPSRFSVSGLQEHLTESLALSAKLKETGAQKSDV---NVARYTAIVKGALNASYFRMSSPNDLPTSVTVVNSVNCSEIQRIEPDTWRIVTGEEPSRTSNAIRLLFTSVESIFVYEHPKRPYSCAPLPELNDSHAPSLILGNRFLNAACVDRVANDINLDCLSAINVASFFDDEVATWK 503
            MRVA++G NLLG ++AFY R+     R                                 I +F+R  + GG K+ T+Q    +V  G+AA  DVA++P   +L+NDA +    +K   +W++FDW++D   + + HS     +  S    ALLQ+ AL  + +F   F        F+    R  +++              G G++P+  ++R ++ + +   ++++  + YGG S + L++V+  +  H+  I + +AASSCVTLGHLLSACG GKY K   T + + F +  S+LDD + P  +Q Y +S  T  P+ NALA L                              +V+K +      G +  SV  + E +               SLG FDAV LAA+IDP  F        L + LAL   L  +G    DV   NVARY +++KG +   +F  S  + + + VTV+ S NCS+++R+    +R+ + E+P   S+ +  +F     I   E   R Y  AP+  L+   APS ILG RF+NAACVDR+AND NLD LSA N ASFF D VA WK
Sbjct:    1 MRVAVIGANLLGSSSAFYIRKALEANRTGPSIAGSEEQSTTGLTSTEVGTDASDPDSTHEIVVFDRLSRPGGFKYQTLQLEDVSVPAGTAADMDVAASPALVSLMNDAGIDPPLRKSMRDWSIFDWEKDDYNIGQVHSALCTIVRESLFLSALLQIFALLSAAHFFQLFQGNGFLLSFVALKRRRRHFLWLRFFWFLVTLFFAG-GVVPIGWLMRLYDSVFFRSWVQVIGGMIYGGHSTSALATVVKHIQHHIQVILERDAASSCVTLGHLLSACGTGKYAKVSVTEFFAKFHIQQSLLDDCVSPGLAQTYGNSACTAGPHTNALAGLFNALVRSPIPTSFRAKATYFDSEQTNALCPQVLKAAGAELRLGIDVRSVQKSGEAQYELSGTDANERHKLVSLGKFDAVALAAIIDPEVFKTDATDYALDQVLALDPAL--SGLLAGDVRVLNVARYISLIKGEVKPQFFNKSRASSIASHVTVLKSPNCSDVKRVADGVYRVASWEKPEHGSSLLSTVFQGATDIVSIERRPRRYHPAPIRNLDGVGAPSFILGTRFMNAACVDRIANDPNLDILSARNTASFFRDGVANWK 588          
The following BLAST results are available for this feature:
BLAST of Gchil8657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3C4_9FLOR3.460e-19153.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPA9_CHOCR3.820e-8432.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..504
NoneNo IPR availableSUPERFAMILY51971Nucleotide-binding domaincoord: 5..184
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:931836..933488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8657.t1Gchil8657.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 931836..933488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8657.t1 ID=Gchil8657.t1|Name=Gchil8657.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=505bp
MSAPDMRVAILGGNLLGCATAFYTRRVRPNARIEIFERRRQLGGNKFATV
QNVVVGSAASADVASAPLFSALLNDAQVSLDAQKRRAEWALFDWKQDSIR
LSRTHSRWIRKLLASNIAPALLQLVALCISLYFASAFYSRSSPFLRYAHR
TGYYVHYPSILLFANAAALGFGLIPMRLMLRFWNYLLYVFRIRMVASITY
GGESLAVLSSVISQMHQHLSTIQKHNAASSCVTLGHLLSACGFGKYVKQP
ATRYLSHFRLHPSILDDAIYPCFSQPYADSNVTPNMNALAMLLEVVKTSS
GWECFSVGDNAERESLGTFDAVILAAVIDPSRFSVSGLQEHLTESLALSA
KLKETGAQKSDVNVARYTAIVKGALNASYFRMSSPNDLPTSVTVVNSVNC
SEIQRIEPDTWRIVTGEEPSRTSNAIRLLFTSVESIFVYEHPKRPYSCAP
LPELNDSHAPSLILGNRFLNAACVDRVANDINLDCLSAINVASFFDDEVA
TWKE*
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