Gchil8640.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8640.t1
Unique Name	Gchil8640.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	425

Homology

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BLAST of Gchil8640.t1 vs. uniprot
Match: A0A2V3IMW6_9FLOR (SAP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMW6_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 3.610e-22
Identity = 156/427 (36.53%), Postives = 207/427 (48.48%), Query Frame = 0

Query:    1 MAFLPHPQLPVRA--TRSPYTSIPTHVDERSALAVSRRRRVFGLLRGSSNSKIASAVRIETVCSASKRDEMRRAILLQIQQRNEVIRKSNAKRERKFKEELISLRAPKQSNLQQPTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSHGEGLDPSHELLPVPERELLSPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLKSKETATRPETTPTT-DTLKSRNGGIDELYTSPSTRPGEESQSETVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIEDKEEVDTPSKTKVQEKPSDSKAPSIGKAILDAIVEGVPSKLKPKDVPQTSDKRELIFLVDSGKVKNLTVSKLRRLLSANSLKTSGRKAELIARLTSFAKQ 424
            MAFLP P LP+R+  T +   +I T      A++V+RR  V+G+  G++++  ++ V    VC+A  R ++RR +L +++QRNE +++SN K    F++EL SLR   ++ L +P P                                               GE    +   +P P  +L + S                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +  K  +   ET  T  D  +   G + E +     +  E+S  E V                                       E+  EV   S T   E   + K+ S GKAILDAIVEGVPS    +  P   DK +LI LVD+GK+KNLTV+KLRRLL+AN LKTSGRKAELIARLTS+AKQ
Sbjct:    1 MAFLPQPILPMRSRSTNAQSITIKTTTSHPGAISVNRRS-VYGVPAGNASTSRSAPV----VCAAGNRADIRRELLKRMEQRNEALKQSNQKCATAFQQELESLR---KTALPKPQPISSKKVSVAPFKPLDPTHELPAYEEPDLLPEAERRELLAPTKPPAEPGERKKETEADIPSPVSDLYAAS-----GQVSDSKQRTRSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNGSVFDKAVSRISETVETLYDEARDTIGEVVESFAPKEKKVLEDSTPEVVS--------------------------------------ENASEV--ASGTSSTEAIDERKSRSFGKAILDAIVEGVPSPPAEEATPPV-DKSDLINLVDTGKIKNLTVTKLRRLLAANKLKTSGRKAELIARLTSYAKQ 373

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BLAST of Gchil8640.t1 vs. uniprot
Match: R7QC39_CHOCR (SAP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC39_CHOCR)

HSP 1 Score: 85.9 bits (211), Expect = 1.650e-14
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 0

Query:  348 SIGKAILDAIVEGVPSKLKPKDVPQTSDKRELIFLVDSGKVKNLTVSKLRRLLSANSLKTSGRKAELIARLTSFA 422
            +IG+ +LDAIVEGV +    +  P   DK ELI LV++GK+KNLTV+KLRRLLS N LKTSGRK+ELIARLTSFA
Sbjct:  379 NIGEKLLDAIVEGVDTPGVDETPPV--DKSELIELVNTGKIKNLTVTKLRRLLSGNGLKTSGRKSELIARLTSFA 451

The following BLAST results are available for this feature:

BLAST of Gchil8640.t1 vs. uniprot

BLAST of Gchil8640.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IMW6_9FLOR	3.610e-22	36.53	SAP domain-containing protein n=1 Tax=Gracilariops...	[more]
R7QC39_CHOCR	1.650e-14	66.67	SAP domain-containing protein n=1 Tax=Chondrus cri...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 388..422 e-value: 2.1E-6 score: 37.3
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 389..421 e-value: 3.1E-10 score: 39.6
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 388..422 score: 11.324471
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 367..424 e-value: 1.2E-8 score: 36.4
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 377..422
None	No IPR available	PIRSR	PIRSR003033-1	PIRSR003033-1	coord: 365..422 e-value: 2.9E-5 score: 20.2 coord: 81..110 e-value: 130.0 score: -1.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..283

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:863469..864879 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8640.t1	Gchil8640.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 863469..864879 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8640.t1 ID=Gchil8640.t1|Name=Gchil8640.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=425bp
MAFLPHPQLPVRATRSPYTSIPTHVDERSALAVSRRRRVFGLLRGSSNSK
IASAVRIETVCSASKRDEMRRAILLQIQQRNEVIRKSNAKRERKFKEELI
SLRAPKQSNLQQPTPEQPTPEQPTLEQPTLKQPTPEQSTPEHLAPDYPAY
EPPAPETPAVSHGEGLDPSHELLPVPERELLSPSEQLELLSQGPKYEEIL
QAPKLDELTPAPKYEELTQAPKYEEITQAPKHEELVAGLKSKETATRPET
TPTTDTLKSRNGGIDELYTSPSTRPGEESQSETVLEKAFQKMSKTVETVV
EETKDGIDDVLENLTESKTEAIIEDKEEVDTPSKTKVQEKPSDSKAPSIG
KAILDAIVEGVPSKLKPKDVPQTSDKRELIFLVDSGKVKNLTVSKLRRLL
SANSLKTSGRKAELIARLTSFAKQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003034	SAP_dom
IPR036361	SAP_dom_sf