Gchil8630.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8630.t1
Unique NameGchil8630.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length282
Homology
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A2V3IMW8_9FLOR (39S ribosomal protein L46, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMW8_9FLOR)

HSP 1 Score: 403 bits (1035), Expect = 1.890e-139
Identity = 188/261 (72.03%), Postives = 226/261 (86.59%), Query Frame = 0
Query:   17 VKSIEQHVLKKVRRGLERLPKEGPDPAANFKHGWRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPEVLGQEYYSAIKPILLGNGPTIHPSD 277
            +K ++ HV KK++RG++RLPK+GPDPAA FKHGWRLA AAVLERYPV+TPD H FE +YLL R ++ QKRARPIP   FLS+KDR+ G TEPTF+DP+AD+YVPAPRVT+AD  +D KSL RAL+ERLYFVVRR++ S NMQFPQVLA+  DVT++Q+A+ ALKSVT+PASRP FH +SYSP+CHLEHVYP +YQQ+HDVYGVKIFFYR ML+SGDV++ RNCEDY WAR CELP++LG EYY+AIKPILLGNGPTI  SD
Sbjct:   19 LKLLQDHVRKKLKRGVDRLPKDGPDPAAQFKHGWRLATAAVLERYPVITPDLHPFEDKYLLGRILEMQKRARPIPPSFFLSEKDRLGGITEPTFDDPIADRYVPAPRVTDADRTNDHKSLHRALQERLYFVVRRTEKSKNMQFPQVLATKPDVTLRQYAQHALKSVTVPASRPRFHVLSYSPSCHLEHVYPSAYQQQHDVYGVKIFFYRTMLISGDVTELRNCEDYMWARACELPQLLGHEYYTAIKPILLGNGPTIDTSD 279          
BLAST of Gchil8630.t1 vs. uniprot
Match: R7QDY3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDY3_CHOCR)

HSP 1 Score: 299 bits (765), Expect = 2.910e-98
Identity = 147/267 (55.06%), Postives = 193/267 (72.28%), Query Frame = 0
Query:   11 RSAHTSVKSIEQHVLKKVRRGLERLPKEGPDPAANFKHGWRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPEVLGQEYYSAIKPILLGNGPTIHPSD 277
            R+   + + + Q+VL+K+++G+ERLP +GPDPAA+F  GWRLA AAV+ERYPVVTP+   FE +YL  RF++ Q+RARPI   LFL++KD +EG+ EP   DP A+ Y PAPR TEAD   D +SL+RAL ERLYF+V+R +     QFPQ+LA++  V + ++AE A + VT    RP  HF+S++PACHLEHVYP+ YQQKHDVYGVK+FFYRAML+ G+V   RN  D+ WARD EL E L  E  +A+  ILLG GPT+   D
Sbjct:   25 RAISNNARIVRQNVLRKMKKGVERLPSQGPDPAASFGKGWRLACAAVVERYPVVTPECDPFESEYLTGRFLEMQRRARPISPALFLTEKDLMEGKREPDLSDPYAEMYQPAPRTTEADRTGDMRSLERALDERLYFLVKRGEKG-RFQFPQILAADEKVPLWRYAELAWRGVT-GEKRPELHFISHTPACHLEHVYPVEYQQKHDVYGVKVFFYRAMLMQGEVEGVRNAVDFVWARDGELAEYLTAEVRTAVDGILLGVGPTVRSKD 289          
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A5J4Z5A8_PORPP (39S ribosomal protein L46, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5A8_PORPP)

HSP 1 Score: 139 bits (349), Expect = 2.140e-35
Identity = 83/228 (36.40%), Postives = 129/228 (56.58%), Query Frame = 0
Query:   50 WRLAAAAVLERYPVVTPDPHKFEHQYLLDRF-------IDRQKRARPIPT---DLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPEVLGQEYYSAIKPILL 267
            W+ A+A + ER P++ P P   E  Y  ++F         R +R +P+     D F +++ R E              +VPAPR+TEAD  +D +SL R L   LYFV++R++TS   QFPQ +  + D  ++  AE ALK+V L   +   ++ +Y P  HLE+ Y   YQ+K+ V+GVKIFFY A L++G+VS+ R+  D+ W    EL E +  +YY A++ +L+
Sbjct:   80 WKFASAVIFERGPIILPQPKPIEELYEENKFQHFNRFAARRDERLQPVSEMERDSFKANQKRGE-------------LFVPAPRITEADKTNDLRSLHRKLDRTLYFVLKRTETSEFYQFPQRVTGD-DEKLRDSAEKALKAV-LGDQKVQTYYTTYRPHAHLEYSYSAEYQKKNQVHGVKIFFYPAELITGEVSKLRHGVDFLWLTAEELKEYISPQYYKAVEDVLV 292          
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A7J7IET9_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IET9_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 1.000e-27
Identity = 84/259 (32.43%), Postives = 125/259 (48.26%), Query Frame = 0
Query:   47 KHGWRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLF--LSDKDRVEGRTEPTFEDPVADK--------YVPAPRVTEADANDDRKSLDRALKERLYFVVRRS-------------------KTSPNMQFPQVLASN-SDVTMKQFAESALKSVTLPASRPV-------FHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRN--CEDYSWARDCELPEVLGQEYYSAIKPIL 266
            +H +R A A +LER P++ P+P   E  +   R +    +AR +P ++F  LS   R +   E    DP   +        Y PAPR TEAD  ++R SLDR L   L+ +V+R                    + + N++ P    S  S ++ +  AE AL S    +            HF+  +P  HL+H Y  ++Q+   + GVK+FFYRA L+SG ++  R    EDY+W    ELPE L  EYY AI P++
Sbjct:   71 QHPFRYAVATILERTPIILPEPTPEERAFRRFRLLMANAQARELPPEVFELLSQSGRPKQNAEM---DPKRSELFELDEGEYEPAPRETEADRTNNRHSLDRKLDRWLFLLVQRKLGPAGRAIWQFPQRNIEGGRRNLNVESPSPKGSTPSSLSFRAEAEKALYSFIETSKEDEDEGESFEAHFIGNAPCAHLKHTYSPAFQKAQHIAGVKVFFYRAQLISGQITGVRPPAAEDYAWVTADELPEYLPPEYYRAIAPVV 326          
BLAST of Gchil8630.t1 vs. uniprot
Match: M2Y465_GALSU (Mitochondrial ribosomal protein L46 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y465_GALSU)

HSP 1 Score: 112 bits (279), Expect = 5.630e-26
Identity = 74/217 (34.10%), Postives = 113/217 (52.07%), Query Frame = 0
Query:   50 WRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPEVLGQEYYSAIKPIL 266
            W+L +AA+LER P +     ++E  Y L R   +    R +PT  F + +       E    D     + PA   T+AD ++++K+LDR L + +YFVV+R       QFPQ  A    + + Q AE ALK+     +R   HFVS  P CH+E  +    +Q+    G KIFFYRA+++ G++       D++W    E+ +VL   YY+A+K IL
Sbjct:   36 WQLFSAAILERLPKLMKPLTEYEKDYRLYRHEAKLPFTRKMPTAWFPNGQREDPVTHEVLIGDFSRRNFTPASLETDADRSNNKKTLDRRLTDSIYFVVKRENRV--WQFPQGEAEEGKMLI-QTAEEALKNFV--GNRITLHFVSNVPVCHVEREFSPEVKQQRKWDGAKIFFYRALVVEGNLEDIPFDYDFAWLSSSEMTQVLPSIYYNAVKNIL 247          
BLAST of Gchil8630.t1 vs. uniprot
Match: M1UQV1_CYAM1 (Mitochondrial ribosomal protein L46 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UQV1_CYAM1)

HSP 1 Score: 103 bits (257), Expect = 4.550e-22
Identity = 80/276 (28.99%), Postives = 126/276 (45.65%), Query Frame = 0
Query:   50 WRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTD----LFLSDKDRVEGRTEPTFEDPVAD----KYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTSPN----MQFPQ--------VLASNSDVTMKQFAESALKSVTL---------PASRPVF----------------------------HFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRN--CEDYSWARDCELPEVLGQEYYSAIKPIL 266
            +R A A +LER P++ P+P   E  +L  + +    +AR +  +    LF    D +  +  P     V +    +YVPAPR TEAD  +DR+SL R L + L+ +V+R K  P      QFPQ        + +SN  + ++   ++A  S              S+  F                            HF+  +P  HL+H+Y  + Q+   + G+KIFFYRA L+SG ++  R     DY+W    ELPE L  +YY ++ P++
Sbjct:   64 YRYAVATILERTPIIMPEPTPEERAFLKFQLLMANAQARELSPEVMQRLFGESGDTIPDK-HPFLNSKVFELDDSEYVPAPRETEADRTNDRRSLRRKLDQWLFLIVQR-KLGPTGRSLWQFPQRFIEEERLMQSSNDPMPLRAGTDAAAASAEALGTSGGAETRCSKTFFFRGEAEKALQSLIETGGTDGDDENDFEAHFIGNAPCAHLKHIYSPALQEAQGISGIKIFFYRAQLISGCITGVRAPAAVDYAWVTAEELPEYLPPDYYRSVAPVV 337          
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A388LN46_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LN46_CHABU)

HSP 1 Score: 95.9 bits (237), Expect = 1.280e-19
Identity = 75/219 (34.25%), Postives = 108/219 (49.32%), Query Frame = 0
Query:   40 PDPAANFKHGWRLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVV------RRSKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPE 252
            P  +++     RL AA VLER PVV P+   +E  +    F +RQ++ R  P D FL     + GR +   E      + PAP +TEAD  +DR+SL+RAL +RLY +V      +     P   FP V  S  + T++Q AE AL  V    S    +FV  +P  HLE   P+S          K+FF+R+ +L G +      +DY+W    EL +
Sbjct:   65 PSESSSADQRERLLAACVLERLPVVLPELPIWESDFQTFCF-ERQQQERKEPPDEFLDAASSL-GREDDDLE------FEPAPCITEADRKNDRRSLNRALAQRLYLIVYGKSALQPDSKQPVWHFPLVEHSAGE-TIRQAAERAL--VQRLGSGMDVYFVGNAPCGHLERSEPIS----------KVFFFRSQILKGSIELQGGIKDYAWVTKAELAD 262          
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A4Y7K8G3_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7K8G3_PAPSO)

HSP 1 Score: 93.2 bits (230), Expect = 4.940e-19
Identity = 69/209 (33.01%), Postives = 108/209 (51.67%), Query Frame = 0
Query:   51 RLAAAAVLERYPVVTP--DPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTS-----PNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPE 252
            ++ AA + ER PVV P  DP  +  Q    R+  + +R  P          D V G+++   +  +  +YVPAPR+TEAD N+DRKSL RAL  RLY ++  +        P   FP+ +    + T+++ AESAL+SV    S    +FV  +P  H+  + P   +  +DV  +K FF+++ +++ +      CEDY W    EL E
Sbjct:   24 KIVAAVLFERLPVVVPKIDPVVYAFQEFSYRWGQQYRRKYP----------DDVLGKSDARGKGDIQIEYVPAPRITEADKNNDRKSLQRALDRRLYLLLYGNSYDSPAGKPVWHFPEKIYEKEE-TLRKCAESALQSVIGDLSHT--YFVGNAPFAHM--IIPPK-EDSNDVPLLKRFFFKSQVIAANKFNVGKCEDYVWVTKDELLE 216          
BLAST of Gchil8630.t1 vs. uniprot
Match: A0A4P9XW61_9FUNG (NUDIX hydrolase domain-like protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XW61_9FUNG)

HSP 1 Score: 92.4 bits (228), Expect = 1.280e-18
Identity = 71/240 (29.58%), Postives = 109/240 (45.42%), Query Frame = 0
Query:   51 RLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVP-------------APRVTEADANDDRKSLDRALKERLYFVVRRSKTSPNMQFPQ--VLASNS--DVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQK---HDVYGVKIFFYRAMLLSGDVS-QTRNCEDYSWARDCELPEVLGQEYYSAIKPILLGN 269
            R+ A+A++ R P +T +P  FEH Y   R      +A P+P D +       E   +      +++                 A RV++AD   DR+SLDRAL+  LY VV+R +     QFPQ  V A  +  D   ++ AE     + +        FV   P    ++ YP  + +K   HD  G K+FF RA + +G      +   D++W    EL EVL  +Y++A+  IL  N
Sbjct:   16 RIVASAIVSRLPQITREPTSFEHAYHQYREAQASAKAAPVPVDFYFKKGSEAERTWQQRERGELSEAAWAQLRAAGDGQPLELAGRVSKADQEGDRRSLDRALQRTLYLVVKRPRDRYQWQFPQGGVEAEEALHDAGRRELAEECGPDMDI-------WFVGRRPVGFTQYAYPTEHTKKFPEHD--GAKVFFLRAHIFAGQAKVDGKETVDFAWLTKEELSEVLEPDYFNAVADILPTN 246          
BLAST of Gchil8630.t1 vs. uniprot
Match: UPI0009014B00 (39S ribosomal protein L46, mitochondrial n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009014B00)

HSP 1 Score: 91.7 bits (226), Expect = 1.740e-18
Identity = 78/232 (33.62%), Postives = 120/232 (51.72%), Query Frame = 0
Query:   31 GLERLPKEGPDPAANFKHGWRLAAAAVLERYPVVTP--DPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKDRVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRRSKTS---PNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPACHLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCELPEVLGQE 257
            GL  L K G   +++   G ++ A+ + ER PVV P  DP  +  Q    R+  RQ+  R  P + FL   D   G+ E   +      Y PAPR+TEAD  +DRKSL RAL +RLY ++  +  S   P   FP+  A  S+ T+++ AESALKSV    S    +FV  +P  H+  V  L+   K +   +K FF+++ +++ +      C+D++W    EL E   ++
Sbjct:    6 GLALLAKRGFSTSSS---GDKIVASVLFERLPVVVPKIDPVVYAFQEFSFRW--RQQYRREYPEN-FLKKAD-TRGKGEYQID------YTPAPRITEADKTNDRKSLQRALDKRLYLLLHGTSLSSGKPVWHFPEK-AYESEETLRRCAESALKSVIGDLSHT--YFVGNAPMGHM--VTQLNENHK-ETPSLKRFFFKSQVIAANKFDIHKCDDFAWVTKDELLEYFPEQ 218          
The following BLAST results are available for this feature:
BLAST of Gchil8630.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMW8_9FLOR1.890e-13972.0339S ribosomal protein L46, mitochondrial n=1 Tax=G... [more]
R7QDY3_CHOCR2.910e-9855.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z5A8_PORPP2.140e-3536.4039S ribosomal protein L46, mitochondrial n=1 Tax=P... [more]
A0A7J7IET9_9RHOD1.000e-2732.43Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2Y465_GALSU5.630e-2634.10Mitochondrial ribosomal protein L46 n=1 Tax=Galdie... [more]
M1UQV1_CYAM14.550e-2228.99Mitochondrial ribosomal protein L46 n=1 Tax=Cyanid... [more]
A0A388LN46_CHABU1.280e-1934.25Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A4Y7K8G3_PAPSO4.940e-1933.01Uncharacterized protein n=2 Tax=Papaver somniferum... [more]
A0A4P9XW61_9FUNG1.280e-1829.58NUDIX hydrolase domain-like protein n=1 Tax=Thamno... [more]
UPI0009014B001.740e-1833.6239S ribosomal protein L46, mitochondrial n=2 Tax=I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 132..268
e-value: 6.3E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR13124:SF1239S RIBOSOMAL PROTEIN L46, MITOCHONDRIALcoord: 19..266
IPR021757Ribosomal protein L46, N-terminalPFAMPF11788MRP-L46coord: 50..76
e-value: 1.0E-4
score: 23.0
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 19..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:832932..833777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8630.t1Gchil8630.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 832932..833777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8630.t1 ID=Gchil8630.t1|Name=Gchil8630.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=282bp
MQRACCWRARRSAHTSVKSIEQHVLKKVRRGLERLPKEGPDPAANFKHGW
RLAAAAVLERYPVVTPDPHKFEHQYLLDRFIDRQKRARPIPTDLFLSDKD
RVEGRTEPTFEDPVADKYVPAPRVTEADANDDRKSLDRALKERLYFVVRR
SKTSPNMQFPQVLASNSDVTMKQFAESALKSVTLPASRPVFHFVSYSPAC
HLEHVYPLSYQQKHDVYGVKIFFYRAMLLSGDVSQTRNCEDYSWARDCEL
PEVLGQEYYSAIKPILLGNGPTIHPSDRAQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021757Ribosomal_L46_N
IPR040008MRPL46