Gchil8585.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8585.t1
Unique NameGchil8585.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length620
Homology
BLAST of Gchil8585.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 476 bits (1225), Expect = 3.020e-157
Identity = 292/643 (45.41%), Postives = 384/643 (59.72%), Query Frame = 0
Query:   24 PRSRSSIPEGRNDSGIDPDI---RTLGEHPQWF--QRLETRIDIANAAHIELLQEVTTLRLKVEDAQVRGVTDDLRTLRRDVNSLLESFGTPGVFIQEYRSLVEEHRLQAERFRARLDTLEAIIRMDGDAEASKDKPDVSEDEE--HRSAKRDRRKSKKRVHLQEDXXXXXXXXXXXXXXXXXXD---------------------------NEDGRR-----ELKPTNPLYRKLLSYRYYRLDNPSGDRTSRGTGKVKDYIKRLSITLQKREFTGTDPILVLDFLARFVQEADILGMSEAQAYLALPYFLKGMAEDQFNSVRGSSRASEGGVTCWPEAVQYLLRSYATGNAIQEAILTLRDTRQKPMETETVYSTGLNKAFHRCGNVFPAYERCSMFVDGLDPSIRALVARHREEKRKLTYLELVQYAQAEGDTLRARQNRKSRPTSALLADGGNSSLSLAGGPAPVGVNDNIHFMGSNPESMGTSGLPSTSAPTT-DEDPALYTQGRRVPAASLPFANTAARFSRPGWRDTAPRRVDSRPQ--PNPAELICYFCYLRGHKAPDCTFPLREGSRIIAQYEALAPEEKARVQSTSYEEQR-ILRAHLADRDTELV----PANGEQPVPFEAAAPNSVGSASKN 619
            PRS + +PE +  +  DP +   + +      F  + LE ++ I  ++ + L+Q++T LR + +DA VR V++D+R LR DVN+++E     G  +QE          +  R   RL+T+E  I  D     +     VSE     HR+    RRK   +V ++ED                 X                             E GR+     ELKPTN LYR+LLSYRYYRL++ S +RT RGTG++KD IKRL +TL+K +FTG DPIL+LDFLARFV EADILGMSEAQAY+ALPYFL+GMAEDQFNSVRGSSRA+EGGVTCWPEAVQYLLRSYATGNAIQ AIL LRDTRQK  E+ET YST L KAFHRCGNV+ A ERC+MFVDGLDP+IR LVARHRE++R++TYLELVQ+AQAEGD LRAR+  K R    L  +               G+ DN+H + S+  S+ T+ LPST+ P+T D DPA+Y  G  VP  ++P+++   R  RPGW+D  P R D RP        +IC+ CY  GH + +C   +++ +++I  YEAL P EK RV +++Y   R +   ++AD  ++      P  G       +A P     A KN
Sbjct:   54 PRSVNEVPEAQGPA--DPALAVAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAE-------RLNRLADRLETVEQTIIHDAVPPGAP----VSEGSRKWHRAMDCHRRK---KVKMEEDLSSSSSSESDVRSHGFSXXXXXXEPNHRSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARKGTKHRSGKVLHLEARQVPSPPLTRRTDHGMYDNMHLLQSD-SSVPTTELPSTTEPSTGDVDPAMYA-GNHVPGLTVPYSS-GTRTQRPGWKDPYPPRSDRRPHIADQLRHIICHLCYKPGHVSTNCYLLMKDMAKVIVNYEALTPAEKERVPASAYLRARSVFPRNIADFQSQDAGTQPPQGGSTAAVAGSANPQGSSEAQKN 677          
BLAST of Gchil8585.t1 vs. uniprot
Match: A0A2V3ICD1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 1.020e-19
Identity = 85/257 (33.07%), Postives = 121/257 (47.08%), Query Frame = 0
Query:   24 PRSRSSIPEGRNDSGIDPDI---RTLGEHPQWF--QRLETRIDIANAAHIELLQEVTTLRLKVEDAQVRGVTDDLRTLRRDVNSLLESFGTPGVFIQEYRSLVEEHRLQAERFRARLDTLEAIIRMDGDAEASKDKPDVSED--EEHRSAKRDRRKSKK---------------RVH---------LQEDXXXXXXXXXXXXXXXXXXDNEDGRR-----ELKPTNPLYRKLLSYRYYRLDNPSGDRTSRGTGKVKD 244
            PRS + +PE +  +  DP +   + +      F  + LE ++ I  ++ + L+Q++T LR + +DA VR V++D+R LR DVN+++E     G  +QE          +  R  ARL+T+E  I  D     +     VSE   + HR+  R RRK  K               R H                                 E GR+     ELKPTN LYRKLLSYRYYRL++ S +RTSRGTG+VKD
Sbjct:   54 PRSVNEVPEAQGPA--DPAMAAAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAE-------RLNRLAARLETVEQTIIHDAVPPGAP----VSEGSRKSHRATDRHRRKKVKMEEGLSSSSSSESDVRSHGSXXXXXXXXXNHRSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSRGTGRVKD 297          
The following BLAST results are available for this feature:
BLAST of Gchil8585.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMI9_9FLOR3.020e-15745.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD1_9FLOR1.020e-1933.07Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:447370..449408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8585.t1Gchil8585.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 447370..449408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8585.t1 ID=Gchil8585.t1|Name=Gchil8585.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=620bp
MSTPTRGSRTGSNRQAESVPPAPPRSRSSIPEGRNDSGIDPDIRTLGEHP
QWFQRLETRIDIANAAHIELLQEVTTLRLKVEDAQVRGVTDDLRTLRRDV
NSLLESFGTPGVFIQEYRSLVEEHRLQAERFRARLDTLEAIIRMDGDAEA
SKDKPDVSEDEEHRSAKRDRRKSKKRVHLQEDSSDSDPNRSSSSSSSESS
DNEDGRRELKPTNPLYRKLLSYRYYRLDNPSGDRTSRGTGKVKDYIKRLS
ITLQKREFTGTDPILVLDFLARFVQEADILGMSEAQAYLALPYFLKGMAE
DQFNSVRGSSRASEGGVTCWPEAVQYLLRSYATGNAIQEAILTLRDTRQK
PMETETVYSTGLNKAFHRCGNVFPAYERCSMFVDGLDPSIRALVARHREE
KRKLTYLELVQYAQAEGDTLRARQNRKSRPTSALLADGGNSSLSLAGGPA
PVGVNDNIHFMGSNPESMGTSGLPSTSAPTTDEDPALYTQGRRVPAASLP
FANTAARFSRPGWRDTAPRRVDSRPQPNPAELICYFCYLRGHKAPDCTFP
LREGSRIIAQYEALAPEEKARVQSTSYEEQRILRAHLADRDTELVPANGE
QPVPFEAAAPNSVGSASKN*
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