Gchil8564.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8564.t1
Unique NameGchil8564.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length330
Homology
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BLAST of Gchil8564.t1 vs. uniprot
Match: A0A2V3IXN2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN2_9FLOR)

HSP 1 Score: 362 bits (929), Expect = 4.890e-121
Identity = 177/330 (53.64%), Postives = 241/330 (73.03%), Query Frame = 0 
Query:    1 MQPSNVGSIEIFADGTCASIGKGSACGYGLVCDEPHARIAEPVPDSHQSKDRSYLYALFAALQFAGGVRSRDVTIYLADQETVHFFNNLLHKWMARDFRRYKGNRLPHPQMWKTIYLTSAHFSDRGVDLNVEFM-KRKSEKMREAQSLAMRGTRMHVVCPLCKRMHGRQFSSHDCEPLCNYDRCNNKRFKSAAEYQDHLDMWHLRDCPSPECEEGLGIYSDKELRHHLHEVHGKVCGCDFCGRLFGCHVKLQKHVMKCPQGERCRDCGLRFKTRREANIHREKVTHGGFDDGDEEYESEGTXXXXXXXXXXXXXXXXXXXILTFATSRYR 329
            ++P N+  + I+AD  C+   KG+ CGYG+ C+EPH RI EP+P   Q ++++ L A+ AA++FA G+R+R++T+YL  +  VH+FN++LH+W+A+DFR Y+  R+PH  +W+ I+  +   SDRGV + + +  +R+ EKMREA +LA+ GTRMHVVC LC+  HGRQF SHDC P+CN+D C  K+F     Y+ HLD+WH RDCPS +CEE +G+YSD+ELR HL EVHG   GC+FCGRLF C  + ++H+MKCP+ ERCRDCGLRF TRREANIHRE +   G +  D+EY SE +XXXXXXXXXXXX       +LT AT+RYR
Sbjct:   64 IKPPNMDQVIIYADAVCSQ--KGNVCGYGIYCEEPHTRIGEPLPGIVQRREKAQLRAMHAAMEFAHGIRAREITLYLPSKPLVHYFNHMLHRWVAKDFR-YRKTRVPHHALWRQIHQLAVEMSDRGVAMELIYASRREDEKMREAFNLALLGTRMHVVCALCQTPHGRQFRSHDCHPICNFDHCRKKKFSDVMSYRQHLDLWHRRDCPSLDCEEDMGMYSDRELRRHLREVHGAAAGCEFCGRLFSCPNRCRRHIMKCPEAERCRDCGLRFFTRREANIHRE-MDQKGEEYEDDEYGSETSXXXXXXXXXXXXSFSDE--MLTLATARYR 387
The following BLAST results are available for this feature:
BLAST of Gchil8564.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXN2_9FLOR4.890e-12153.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..157
e-value: 1.7E-15
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..313
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 263..285
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:292454..293443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8564.t1Gchil8564.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 292454..293443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8564.t1 ID=Gchil8564.t1|Name=Gchil8564.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=330bp
MQPSNVGSIEIFADGTCASIGKGSACGYGLVCDEPHARIAEPVPDSHQSK
DRSYLYALFAALQFAGGVRSRDVTIYLADQETVHFFNNLLHKWMARDFRR
YKGNRLPHPQMWKTIYLTSAHFSDRGVDLNVEFMKRKSEKMREAQSLAMR
GTRMHVVCPLCKRMHGRQFSSHDCEPLCNYDRCNNKRFKSAAEYQDHLDM
WHLRDCPSPECEEGLGIYSDKELRHHLHEVHGKVCGCDFCGRLFGCHVKL
QKHVMKCPQGERCRDCGLRFKTRREANIHREKVTHGGFDDGDEEYESEGT
TSSSSSSSTTTSSFSSDDDILTFATSRYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013087Znf_C2H2_type
IPR012337RNaseH-like_sf