Gchil8546.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 382 bits (980), Expect = 3.560e-128 Identity = 195/352 (55.40%), Postives = 251/352 (71.31%), Query Frame = 0
Query: 23 CPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRTNDTQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVSIVTVGVGDAVNGEYLRALATAPDFFVDSSFDALPSDVVRVAESSCDVVQVTPDP-VPPTVAXXXXXXXXXXXPTACQQAYDRCPFAFARIASVPLFAIDTPPDAPFTPAIVSRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATFSAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENVAAMRSDGQCVVFRT 373
C +N+VCF LD+SGSI +EY +Q+FVI+V+R ++SRTN T YSAY F+SSA VIQA+T LE FVP + + +S G T++Y+GL+ACF EV AGNRV+VLITDG D G PLA LAP VK+A V+IVT+GVG V+ +YLR+LAT P FF+ S+F +LP+DVVRVAESSCDVV+V+P P + PT P C++AYD C FAF SVP FA+D PD PFTP IVSR+ + +G+LNTN IV E I DDG VT +TS A Q FS +QFKP + + S + HE+F ADQL++ R+RCVR+F S QLL+VTPP +V+ N A R+D +C+VFRT
Sbjct: 37 CSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVPDITPT-----------PIPDPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEPAIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTRADNKCMVFRT 377
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 277 bits (709), Expect = 2.010e-85 Identity = 180/494 (36.44%), Postives = 237/494 (47.98%), Query Frame = 0
Query: 22 TCPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRTNDTQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVSIVTVGVGDAVNGEYLRALATAPDFFVDSSFDALPSDVVRVAESSCDVVQVTPDP-------VPPTVAXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------PT--ACQQAYDRCPFAFARIASVPLFAIDTPPDAPFTPAIVSRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATFSAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENVAAMRSDGQCVVFRT 373
TCP+++VCFA+DQSGSI Y Q FVI VAR++ SR+ T +SAY FS+S IQ +T +LE FVP V + G T++Y+GL+ CF ++ GN+V++L+TDG+D FPLAS LAP +K A ++IVTVG+G V+ YL LA+ PDFF+ F LPS+VV +++ +CD V +P+P + P V XXXXXXXX PT AC+QAY C FAF VP F + PD PFTP IVSR +G+LNTNGI+PE I DG+V +TS A F+ +QFKP +P+ S VG++TF +QL RNRCVRLFF+ QLL TPPF V+ N+ A R+D +CVVFRT
Sbjct: 32 TCPIDSVCFAMDQSGSIF-LNYGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQLMFSTLPSEVVSLSQMTCDAVDASPEPSETPEETMEPFVTETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFXXXXXXXXXXXXXXLVSESPEPSMTXXXXXXXXXXXXXXXXXXXXXXXXXVIESPIXXXXXXXXXXXVPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRT 524
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 197 bits (502), Expect = 1.320e-56 Identity = 127/355 (35.77%), Postives = 192/355 (54.08%), Query Frame = 0
Query: 23 CPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRT-NDTQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFP--LASELAPDVKSAAVSIVTVGVGDAVNGEYLRALATAPDFFVDSSFDALPSDVVRVAESSC-DVVQVTPDPVPPTVAXXXXXXXXXXXPTACQQAYDRCPFAFARIASVPLFAIDTPPDAPFTPAIVSRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATFSAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENVAAMRSDGQCVVFRT 373
C ++ VC+ LDQS S+ ++Y ++ FVI +ARQ+ ++ +D SA AFS+ A VIQ T L FV V G + GT + L C + G++ +VLITDG G A +A ++K IVTVGVG ++ +LR +A+ PD FV +SFD L +++V C D+++ T C +A+D C F F + F+I PD FTP IVS+DA RLG+LN+N IVPE I D+G V +T+ + Q F+ + FKP+ + N S +GH+TFH +Q + ++RC+R++F+ Q + ++ RS+ +CVVFRT
Sbjct: 28 CRIDNVCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLN-KFVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDGGFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIAS-PDLFVGTSFDNLDEVIMQVVSDICVDIIE-----------------------TDCSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNG-VFPITNFGS-QRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNN---KLINRNDVPRSENKCVVFRT 352
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR) HSP 1 Score: 196 bits (497), Expect = 9.020e-56 Identity = 129/356 (36.24%), Postives = 186/356 (52.25%), Query Frame = 0
Query: 23 CPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRT-NDTQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGE-DTGFPLAS-ELAPDVKSAAVSIVTVGVGDAVNGEYLRALATAPDFFVDSSFDALPSDVVRVAESSCDVVQVTPDPVPPTVAXXXXXXXXXXXPTACQQAYDRCPFAFARIASV--PLFAIDTPPDAPFTPAIVSRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATFSAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENVAAMRSDGQCVVFRT 373
C + VC+ LDQSGSI+D EYA +QRFV +A + S + D SA AFS S IQ AT L F V R T + GL C R + G+R +VL+TDGE D+ L + A D+ +A + IV VG+G++VN + LR L P+F++D+ FD L S + VA + C+++ T C++AYD+C F F+ + +F+I PD FTP +V + LG LNTN +VPE I +G + +Q F+ + FKP+ + S VGH+TF +QL + ++CVR++F+ Q V P VV S+ +CVVFRT
Sbjct: 29 CQIKHVCYILDQSGSINDNEYALEQRFVNKIADIIDSTSITDPFNSAVAFSRSVRTIQPATNNLH-TFKDAVSKERIFRSTTRISFGLRQCQRILEGKQGSRTMVLLTDGEPDSSDRLQTINAAEDITNAGIGIVAVGIGNSVNADLLRQLVPEPEFYIDTRFDDLDSKIQVVANAICNIIPEK---------------------TECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFI--EGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQ--EVPPNGQVVNRNNVPTSENKCVVFRT 358
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 163 bits (413), Expect = 1.430e-41 Identity = 87/193 (45.08%), Postives = 114/193 (59.07%), Query Frame = 0
Query: 182 FDALPSDVVRVAESSCDVVQVTPDPVPPTVAXXXXXXXXXXXPTACQQAYDRCPFAFARIASVPLFAIDTPPDAPFTPAIVSRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATFSAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENVAAMRSDGQCVVFRTM 374
F P+ V + SC + TP PV PT CQQAYD C F F VP+F++D P + F+P I SR+ + LG+LN+N + E+ DG +TSL A+Q FS +QFKPF + N S +GHETF ADQ ++R RCVR+FFS QLL +TPPF+VV NV A R D +CVVF+T+
Sbjct: 419 FYIYPTPFVEYLQRSC--LGGTPGPVLPTPTPEPVVDK-------CQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKTV 602
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A7S1XH88_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH88_9RHOD) HSP 1 Score: 101 bits (251), Expect = 1.990e-20 Identity = 108/354 (30.51%), Postives = 156/354 (44.07%), Query Frame = 0
Query: 17 AAARATCPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRTND----TQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVS-IVTVGVG-DAVNGEYLRALATAPDFFVDSS-FDALPSDVVRVAESSCDVVQVTPDPVPPTVAXXXXXXXXXXXPTACQQAYDRCPFA-FARIASVPLFAIDTPPDAPFTPAIV--SRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATF-SAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENV 359
AA CP+N++CFA+D+SGSI ++ + V VA + S + T Y A FSSSA V+ T A F V +S GGTS L C + P AG RV+VL+TDG+ + A+ A +KS + +VT+GVG + LR LA+ P+FFV S+ F L + ++ ++ C PP + CP + F R P I F +V SR+A R+G ++ T AQ FS S FK F + S VG+ET +Q + CVRL F+ Q L+ + +V++NV
Sbjct: 17 AALAQQCPINSICFAIDESGSISGTQFIAENTAVKNVADSIESISISLGISTTYGAVGFSSSANVVSPLTNL--ATFKGNVDSNPKSGGGTSYGPALQQCRNLIGPQAGVRVIVLVTDGQPSDPAAATSEANIIKSLPNTFLVTIGVGLTSTATTLLRDLASGPEFFVGSTDFSTLTTQTGKILQAIC----------PPPI----------------------CPKSNFCRFRLTPQ-GIIVRKGKSFIVGVVGGSREASVRVG------------GSFVKISQWTPQGLAQRFSPSFFKTFSTVFPSMRSGVGYETPQRNQADFLDMSCVRLPFAAYQKLDSSG--NVIDNV 321
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A2V3IZ36_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ36_9FLOR) HSP 1 Score: 89.4 bits (220), Expect = 1.130e-17 Identity = 43/111 (38.74%), Postives = 70/111 (63.06%), Query Frame = 0
Query: 89 FVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVSIVTVGVGDAVNGEYLRALATAP--DFFVDSSFDALPSDVVRVAESSC 197
F VL GGT++ +GL AC+ +VR G+R ++L+TDG+ G P+A++ +KS +SIVT+G+G VN +YL+ +A+ P DF++ + F+ L V VA ++C
Sbjct: 2 FQAKVLAPVNPFGGTNIQAGLTACYEQVRNGKGSRSIILLTDGQSFGAPIANQ----IKSEGISIVTIGIGKNVNADYLKDIASDPAEDFYISAEFEKLGQKVAEVAATTC 108
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A7S1XGG3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGG3_9RHOD) HSP 1 Score: 92.4 bits (228), Expect = 3.360e-17 Identity = 98/348 (28.16%), Postives = 158/348 (45.40%), Query Frame = 0
Query: 23 CPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRTN----DTQYSAYAFSSSALVIQAATPRLEADFVPTVLGTARSRGGTSVYS-GLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVS-IVTVGVGDAVNGE-YLRALATAPDFFVDSSFDALPSDVVRVAESSCDVVQ-VTPDPVPPTVAXXXXXXXXXXXPTACQQAYDRCPFAFARIASVPLFAIDTPPDAPFTPAIV--SRDARQRLGILNTNGIVPELIADDGAVTALTSLSAAQPFSISQFKPFPVPNATF-SAVGHETFHADQLAMVRNRCVRLFFSQLQLLNVTPPFDVVENV 359
C VN++CFA+D+SGS+ A++ ++ V+ VA ++ S ++ A AF + + T L A F TV G + GG + Y+ L AC + G RV+VL+TDG + A+ A +KS + +VTVGV A +G+ L+ LA+ P++FVD++ V + + + D+V + P PV P F R + P I F +V SR+A R+G + +P ++ + AQ FS S FK + + S VG+ET +Q + CVRL F+ Q+L+ +V+ N+
Sbjct: 44 CAVNSICFAIDESGSVSQADFDKEKSAVVDVATRIQSIDTALGISPRFGAIAFDGNVQPVSPLTTSLSA-FTTTVNGFSSRFGGDTRYAPALQACQSLLSGQTGVRVIVLLTDGAPSDATAATTAANAIKSTPNTFLVTVGVNLAASGKTLLQGLASGPEYFVDAT------SFVDLQQKTGDIVAAMCPPPVCPKTN-------------------------FCRFSLTP-GGIIVRKGGSFIVGVVGGSREASVRVG----SSYIP--------ISQWSPPGLAQHFSSSFFKTYSTVYPSMRSGVGYETAQQNQGNFLDMACVRLPFAAYQILDTNG--NVISNI 344
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A7S1THZ2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THZ2_9RHOD) HSP 1 Score: 83.6 bits (205), Expect = 4.630e-15 Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 0
Query: 23 CPVNAVCFALDQSGSIDDAEYATQQRFVIAVARQLASRTND----TQYSAYAFSSSALVIQ--AATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTAGNRVVVLITDGEDTGFPLASELAPDVKSAAVSIVTVGVGDAVNGE-YLRALATAPDFFVDS 180
C VN +CFA+D+SGSID E+ T+ V +A ++ S ++ T+Y AY FS +I A P L A + ++ G T + L +C + +G RVVVL+TDG T P A +K+ + +VTVGVG E L++L++ P F+V++
Sbjct: 53 CAVNNICFAIDESGSIDATEFQTESNAVGTIATRIDSISSSVGITTKYGAYGFSDRVKLISPLAQLPSLLA----AITANTQTPGATYTGAALTSCRTLLSSASGVRVVVLVTDGVPTDDP--GPAAAAIKANNIKLVTVGVGVTATAEALLKSLSSGPGFYVNA 211
BLAST of Gchil8546.t1 vs. uniprot
Match: A0A8B6G773_MYTGA (VWFA domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6G773_MYTGA) HSP 1 Score: 62.4 bits (150), Expect = 4.260e-7 Identity = 55/187 (29.41%), Postives = 90/187 (48.13%), Query Frame = 0
Query: 28 VCFALDQSGSIDDAEYATQQRFVIAVARQLAS-RTNDTQYSAYAFSSS--------------ALVIQAATPRLEADFVPTVLGTARSRGGTSVYSGLDACFREVRPTA-GNRVVVLITDGEDTGFPLASELAPDVKSAAVSIVTVGVGDAVNGEYLRALATA-PDFFVDSSFDALPSDVVRVAESSC 197
+ F +D SGSI+DAE+ + F+ +V + + N Q+ A +FSS A + AA + + T +G A ++++ +D RP A NR ++ITDG+ G + A +K+A V I+ VGVGD V+ L+A+A+ + F+ FD PS + + S C
Sbjct: 31 IVFLIDDSGSINDAEFLQMKIFIKSVVQLFPNVGPNGAQFGAVSFSSEDDQTTEFDLNDHGDATSVLAAIDSVVNNGTGTHIGAALEYLENNLFN-MDVDNGAGRPCAVDNRFAIVITDGKTVGGTVPK--AQSLKNANVKILAVGVGDGVDTSLLQAIASGNQNVFLVEDFDTFPSILDGLISSIC 214 The following BLAST results are available for this feature:
BLAST of Gchil8546.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil8546.t1 ID=Gchil8546.t1|Name=Gchil8546.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=375bpback to top |