Gchil8495.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8495.t1
Unique NameGchil8495.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length199
Homology
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A2V3J031_9FLOR (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J031_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 4.060e-96
Identity = 143/172 (83.14%), Postives = 150/172 (87.21%), Query Frame = 0
Query:   29 PERFDDDIPAPAMPAAXXXXXXXXXXXXXXXXXASRPKSPVVNGTFE-KGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMAAPK-KKCCIS 198
            PER+D+D+PAPAMP A                 + RPKSPVV GTFE KGDSDD+EVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGA+EDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGM+APK KKCCIS
Sbjct:   18 PERYDEDVPAPAMPTAGA---------------SVRPKSPVVYGTFEEKGDSDDDEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGASEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMSAPKPKKCCIS 174          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A1X6NYM0_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYM0_PORUM)

HSP 1 Score: 202 bits (514), Expect = 9.060e-63
Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0
Query:   64 RPKSPVVNGTFEKGDSDDE-EVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPK 170
            +PKSPVV+GT+E  +     EVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVG +E+TMNN+RVIRGPPK
Sbjct:   68 QPKSPVVHGTYEAAEEXXXXEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGDDEETMNNVRVIRGPPK 175          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A1X6NYD2_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYD2_PORUM)

HSP 1 Score: 199 bits (506), Expect = 1.760e-62
Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 0
Query:   64 RPKSPVVNGTFEKGDSDDE-EVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPK 170
            +PKS VV+GT+E  +     EVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVG +E+TMNN+RVIRGPPK
Sbjct:    2 QPKSAVVHGTYEAAEEXXXXEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGDDEETMNNVRVIRGPPK 109          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A7S0ZJP0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJP0_9RHOD)

HSP 1 Score: 194 bits (493), Expect = 4.910e-59
Identity = 88/108 (81.48%), Postives = 100/108 (92.59%), Query Frame = 0
Query:   62 ASRPKSPVVNGTFEKGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPP 169
            A  P  PV++GT+++ D ++EEVMVKTEFVWADGAE+DVKLSG+WNGWMPVQMYHEGGGMWSVVTPVP GTHEFKFVVDGEW+HSTRHPTVG +E+TMNNIRVIRGPP
Sbjct:  116 AGGPGVPVMHGTYDRPD-EEEEVMVKTEFVWADGAEYDVKLSGSWNGWMPVQMYHEGGGMWSVVTPVPTGTHEFKFVVDGEWRHSTRHPTVGDDEETMNNIRVIRGPP 222          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A1X6NKY1_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKY1_PORUM)

HSP 1 Score: 187 bits (475), Expect = 8.190e-58
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 0
Query:   75 EKGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPK 170
            E  D  +EEVMVKTEFVWADGA HDV+LSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEW+HSTRHPTVG +E TMNNIRVIRGPPK
Sbjct:    5 EYADPGEEEVMVKTEFVWADGANHDVRLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWRHSTRHPTVGDDEMTMNNIRVIRGPPK 100          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A5J4Z3V9_PORPP (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3V9_PORPP)

HSP 1 Score: 190 bits (482), Expect = 1.190e-57
Identity = 85/101 (84.16%), Postives = 97/101 (96.04%), Query Frame = 0
Query:   68 PVVNGTFEKGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGP 168
            PV++GT+E+ D ++EEVMVKTEFVWADGAE+DVKLSG+WNGWMPVQMYHEGGGMWSVVTPVP GTHEFKF+VDGEW+HSTRHPTVG +E+TMNNIRVIRGP
Sbjct:  101 PVMHGTYERPD-EEEEVMVKTEFVWADGAENDVKLSGSWNGWMPVQMYHEGGGMWSVVTPVPTGTHEFKFIVDGEWRHSTRHPTVGDDEETMNNIRVIRGP 200          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A2V3IVS0_9FLOR (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVS0_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 3.390e-56
Identity = 91/138 (65.94%), Postives = 110/138 (79.71%), Query Frame = 0
Query:   63 SRPKSPVVNGTFEKGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMAAPK---KKCCI 197
            ++  +P V+ T+EK   ++EEVMVKTEFVWADGAE+DV+LSG+WNGWM +QMYHEGGGMWSVVTPVPAG HEFKFVVDGEW+HSTRHPTVG +E TMNN+R+IRGPP+NK+   R  +  N+ A    P    K CCI
Sbjct:  148 AKGNAPFVHNTYEKN-QEEEEVMVKTEFVWADGAENDVQLSGSWNGWMTIQMYHEGGGMWSVVTPVPAGIHEFKFVVDGEWRHSTRHPTVGDDEATMNNVRMIRGPPRNKK---REDDGANRPADDTPPDAVPKGCCI 281          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A7S0BNB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNB0_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 2.960e-55
Identity = 89/135 (65.93%), Postives = 104/135 (77.04%), Query Frame = 0
Query:   64 RPKSPVVNGTFE-KGDSDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMAA-PKKKCC 196
            RP  P+V G    +    + EV+VKTEFVWADGAE D KL+G+WNGWMP+QMYHEGGGMWSVVTPVPAGTHEFKF+VDGEWKHSTRHPTVG +E+ MNNIRVI+GPP      A + +Q   QA   A P+K+CC
Sbjct:   95 RPHIPMVQGEHTVENPLGEGEVLVKTEFVWADGAEKDAKLAGSWNGWMPIQMYHEGGGMWSVVTPVPAGTHEFKFIVDGEWKHSTRHPTVGEDEENMNNIRVIKGPPP-----AYVEQQSAAQAEQGARPRKRCC 224          
BLAST of Gchil8495.t1 vs. uniprot
Match: M2Y269_GALSU (AMPK1_CBM domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y269_GALSU)

HSP 1 Score: 149 bits (377), Expect = 2.350e-42
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 0
Query:   79 SDDEEVMVKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPP 169
            +D E+  V+TEFV+ADGA+ DV LSG WN W P+QMYHEGGG+WSVVT VP GTHEFKF+VDGEW+HSTRHPTVG +E++ NN+RV++GPP
Sbjct:   66 TDLEKEGVRTEFVYADGAQEDVLLSGDWNNWTPIQMYHEGGGIWSVVTLVPPGTHEFKFIVDGEWRHSTRHPTVGIDEESKNNVRVVKGPP 156          
BLAST of Gchil8495.t1 vs. uniprot
Match: A0A2V3IYZ1_9FLOR (Phosphoglucan phosphatase LSF1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYZ1_9FLOR)

HSP 1 Score: 139 bits (349), Expect = 1.060e-38
Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0
Query:   86 VKTEFVWADGAEHDVKLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHPTVGANEDTMNNIRVIRGPP 169
            VKTEFV+ADGA+ DV+LSG WN W  +QM+HEGGGMWSVVTPVP G HEFKF+VDGEWKHS RHPT+G ++ ++NN+RV+   P
Sbjct:   13 VKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQP 96          
The following BLAST results are available for this feature:
BLAST of Gchil8495.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J031_9FLOR4.060e-9683.14SNF1-related protein kinase regulatory subunit bet... [more]
A0A1X6NYM0_PORUM9.060e-6386.11AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A1X6NYD2_PORUM1.760e-6285.19AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A7S0ZJP0_9RHOD4.910e-5981.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NKY1_PORUM8.190e-5888.54AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A5J4Z3V9_PORPP1.190e-5784.16SNF1-related protein kinase regulatory subunit bet... [more]
A0A2V3IVS0_9FLOR3.390e-5665.94SNF1-related protein kinase regulatory subunit bet... [more]
A0A7S0BNB0_9RHOD2.960e-5565.93Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y269_GALSU2.350e-4270.33AMPK1_CBM domain-containing protein n=1 Tax=Galdie... [more]
A0A2V3IYZ1_9FLOR1.060e-3869.05Phosphoglucan phosphatase LSF1, chloroplastic n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 87..166
e-value: 2.2E-17
score: 63.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 77..167
e-value: 3.7E-20
score: 73.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..35
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 48..162
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 87..165
e-value: 1.31899E-21
score: 82.2616
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 87..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000116_piloncontigtig00000116_pilon:163917..165049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8495.t1Gchil8495.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000116_pilon 163917..165049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8495.t1 ID=Gchil8495.t1|Name=Gchil8495.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=199bp
MHSDPAPLRAPTPPPEPPLQMAPEPPVPPERFDDDIPAPAMPAAASASPP
ATAAAAAAATAASRPKSPVVNGTFEKGDSDDEEVMVKTEFVWADGAEHDV
KLSGAWNGWMPVQMYHEGGGMWSVVTPVPAGTHEFKFVVDGEWKHSTRHP
TVGANEDTMNNIRVIRGPPKNKQNTARLSEQRNKQAGMAAPKKKCCIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032640AMPK1_CBM
IPR013783Ig-like_fold
IPR014756Ig_E-set