Gchil8333.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8333.t1
Unique NameGchil8333.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length360
Homology
BLAST of Gchil8333.t1 vs. uniprot
Match: A0A2V3ISS5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISS5_9FLOR)

HSP 1 Score: 275 bits (703), Expect = 1.630e-81
Identity = 151/357 (42.30%), Postives = 217/357 (60.78%), Query Frame = 0
Query:    4 LLAGSKPIAEFPVGKTTVGFTVTNNHHDSNTDYAAVISEDPLEYVVYCYYDEMSSSASTSLPGELSQGERPLFASNVSNIYYASAGEFQDSQKSKLFQTRSNFLVTGGKKTKVFITHIGAVRLLFDDLLFLDSDEPTKGPPHLRIKSYPV-FNFQTVQVLYSRPSPSDVKLQHPAQGQKLKCNMSHILPVLTVVDLRSSQLGGRGTAAKYGVGLFNGVKIGFGNKQIEILVNLSTGDEVFVSMPACSKTDVVNITAPSTVGTSNGLAIQYSSSALPPILFLESCVRDSSNPIELRLINGIMYGPDQRYYHSAIDSPVYEFSVGHDMKAIDLCPLPSHGKRLSILGLAFNPADTDLRI 359
            L +G KP+  FPVG T VG TVT++  DS++DYA VI  D      YCYY       + +L  + +Q +RP+FA+ V+NI++ SA +F    + K F+ R  F + GGK  K  + HIG +RLL +  L L+SD  ++        SY V      VQ+ Y+RP+ +D +LQ  A G+ ++ + + +LPVLT ++ RSSQ    G A   G+GL NG+++ FGN++  I    ST  E+ V++P  S+  V++I A + VG SN L  +Y+SSA PPI F ES V D    + + L+ GI YGPD +YY SAI+S V+ F+  ++MKA D C  PS GK  SILGLAFNPADT+ ++
Sbjct:  118 LASGPKPVVNFPVGTTVVGLTVTDSIDDSHSDYATVIVSDTNADGAYCYY----YPETATLSDDFTQPDRPVFAAKVANIHFDSASDFPSLYREKPFKMRCTFRIKGGKSVKFAVDHIGPLRLLVEKQLVLESDATSESSTSA---SYDVPSGTNNVQLFYTRPTSADARLQLTAGGKHMQTDKAKVLPVLTSIEPRSSQRSAGGAATITGIGLVNGIEVRFGNEKAAIDPERSTDTEIIVTVPNASEDGVISIIATNKVGQSNALKFEYTSSANPPIRFTESRVTDGDERLVMSLLTGIKYGPDHKYYLSAINSVVHSFAADYNMKARDFCSSPSLGKHRSILGLAFNPADTEFKL 467          
BLAST of Gchil8333.t1 vs. uniprot
Match: R7Q8W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8W8_CHOCR)

HSP 1 Score: 225 bits (573), Expect = 7.100e-63
Identity = 134/350 (38.29%), Postives = 192/350 (54.86%), Query Frame = 0
Query:   14 FPVGKTTVGFTVTNNHHDSNTDYAAVISEDPLEYVVYCYYDEMSSSASTSLPGELSQGERPLFASNVSNIYYASAGEFQDSQKSKLFQTRSNFLVTGGKKTKVFITHIGAVRLLFDDLLFLDSD----EPTKGPPHLRIKSYPVFNFQTVQVLYSRPSPSDVKLQHPAQGQKLKCNMSHILPVLTVVDLRSSQLGGRGTAAKYGVGLFNGVKIGFGNKQIEILVNLSTGDEVFVSMPACSKTDVVNITAPSTVGTSNGLAIQYSSSALPPILFLESCVRDSSNPIELRLINGIMYGPDQRYYHSAIDSPVYEFSVGHDMKAIDLCPLPSHGKRLSILGLAFNPADTDLRI 359
            F VG T VG TV ++  DSNTDYA VI + P+    YCYY + + S   S+  ++++G RP FA+  + + +A    F + Q+   FQ R  FLVTGG + +  + H G VRLL D  L L SD    E + G   L    +      TV +LYSR +    KLQ    G  ++ N++ +LPVL  +D   S   G G A   G+GLFN V I FG+ ++E+    +   EV V +P     ++V++ A +  G SN +   Y +    PI F      ++ N  +++LI GI YGPD R+Y SAI+S VY F+    M+  DLC  PS G+  +ILGLAFNPADT+ ++
Sbjct:  143 FRVGTTIVGLTVRDDFRDSNTDYATVIVKKPVVDGAYCYYYDAAESGF-SIDDDINEGIRPTFAAVAAKVDFADPAAFPEEQRDVQFQARCVFLVTGGGRKEFEVEHFGPVRLLIDGELVLQSDSKDLETSAGGIDLPEGEH------TVHLLYSRVNSEGAKLQLKKGGDTIQHNIAKVLPVLRGLDPGDSTPDGGGKAKISGIGLFNKVTIQFGSDKLEVDEVTANETEVTVEVPEVEGEEIVDVVAENQAGKSNAIPFTYKNDGKTPIKFDVRRATENGNTFQIKLITGIKYGPDHRFYASAINSAVYSFAANSRMEVSDLCLSPSLGRHRAILGLAFNPADTEFKL 485          
BLAST of Gchil8333.t1 vs. uniprot
Match: A0A2V3ISS4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISS4_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 9.610e-31
Identity = 100/366 (27.32%), Postives = 167/366 (45.63%), Query Frame = 0
Query:    4 LLAGSKPIAEFPVGKTTVGFTVTNNHHDSNTDYAAVISEDPLEYVVYCYYDEMSSSASTSLPGELSQGERPLFASNVSNIYYASAGEFQDSQKSKLFQTRSNFLVT---GGKKTKVFITHIGAVRLLFD-----DLLF--LDSDEPTKGPPHLRIKSYPVFNFQTVQVLY--SRPSPSDVKLQHPAQGQKLKCNMSHILPVLTVVDLRSSQLGGRGTAAKYGVGLFNGVKIGFGNKQIEILVNLSTGDEVFVSMPACSKTDVVNITAPSTVGTSNGLAIQYSSSALPPILFLESCVRDSSNPIELRLINGIMYGPDQRYYHSAIDSPVYEFSVGHDMKAIDLCPLPSHGKRLSILGLAFNPADTDL 357
            L   S P   FPVG TT+   V ++  + + D   V          YCYY   SS+   S+   +  G +P+F   VS I ++S G+     +S+  Q R  + +        + + + H G +R+L +     D+L    D+D  T       +++      Q +Q+LY      P  + L        L  +++  LP++  +   +S L   G     G G ++   + F +K +      ST + + V +P   K   V++T  +  G SN L   Y+  AL PI F +  V+   +  ++ LI  I +GPD R Y +++DS V+  ++  DM   DLC   S G   +++GLAFNPA+TD+
Sbjct:  217 LAESSTPSLSFPVGVTTIILLVEDDAGNKHEDKTTVTVYPSTSQGAYCYYYPSSSNTVFSIEDNVVNGIKPIFGQRVSRIDFSSVGDIPARLRSQSLQIRCAYTLQVPDDPVASLLSVRHRGPMRVLLEIPNAHDVLMEQFDTDMRTTS-----VRTVIPAGTQLLQILYIWDGKRPPLLNLLRTPYAPILH-DLATQLPLIHTIAPDNSTLEAGGLLKVQGTGFWSDPYVYFADKPVAPDWQRSTNELLVVQVPPAEKPGTVDVTIGNRYGGSNALPFSYAQDALSPIRFKQGVVKKDDDNFKISLITNIKFGPDHRMYLASLDSFVHSMAISKDMTVSDLCTSNSIGINRTVIGLAFNPAETDV 576          
The following BLAST results are available for this feature:
BLAST of Gchil8333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ISS5_9FLOR1.630e-8142.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8W8_CHOCR7.100e-6338.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ISS4_9FLOR9.610e-3127.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:2082372..2083582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8333.t1Gchil8333.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 2082372..2083582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8333.t1 ID=Gchil8333.t1|Name=Gchil8333.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=360bp
MRGLLAGSKPIAEFPVGKTTVGFTVTNNHHDSNTDYAAVISEDPLEYVVY
CYYDEMSSSASTSLPGELSQGERPLFASNVSNIYYASAGEFQDSQKSKLF
QTRSNFLVTGGKKTKVFITHIGAVRLLFDDLLFLDSDEPTKGPPHLRIKS
YPVFNFQTVQVLYSRPSPSDVKLQHPAQGQKLKCNMSHILPVLTVVDLRS
SQLGGRGTAAKYGVGLFNGVKIGFGNKQIEILVNLSTGDEVFVSMPACSK
TDVVNITAPSTVGTSNGLAIQYSSSALPPILFLESCVRDSSNPIELRLIN
GIMYGPDQRYYHSAIDSPVYEFSVGHDMKAIDLCPLPSHGKRLSILGLAF
NPADTDLRI*
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