Gchil8325.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8325.t1
Unique NameGchil8325.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length188
Homology
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BLAST of Gchil8325.t1 vs. uniprot
Match: A0A2V3J551_9FLOR (Sister chromatid cohesion protein PDS5-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J551_9FLOR)

HSP 1 Score: 209 bits (531), Expect = 4.460e-59
Identity = 112/187 (59.89%), Postives = 139/187 (74.33%), Query Frame = 0 
Query:    1 MMTYTLIRPDRGSKLSKSRCRECIHSNKSDSDAIRRLGKDLAAKLDSFTGEIEATVAPVAFLSQLAKYAPTSFKSCVLECFDFSRALLSGTMNGVIHSAQEADDESETLTADLQEMKKTLSENHIFGPETGFLAAEMLDRRSLCTAELVQRAVKLLVYTLAFQGDAESIAVIDILVRICYDTQGNVF 187
            M T  LIRPDRG+ LSK  CR  IH N+   + + +LGKDL +KLDSFTG+IEA +APVA L+QLAK+AP SF+ C LECFDFSRALLSGTMN VI SA E        T +L +MK TL  +HIFG  TG LAA++ D+R+L TAE+VQRA+KL VY+LAFQ + E++AVIDIL+RI  +  G+VF
Sbjct:  943 MTTDVLIRPDRGALLSKWGCRAFIHVNRKPPEDLLKLGKDLTSKLDSFTGDIEAIIAPVAALTQLAKHAPKSFRPCALECFDFSRALLSGTMNAVIQSANETVFGDAKQTEELTKMKDTLLSSHIFGVNTGPLAADLQDKRALYTAEIVQRAIKLFVYSLAFQDEEETLAVIDILLRITDEKHGDVF 1129
The following BLAST results are available for this feature:
BLAST of Gchil8325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J551_9FLOR4.460e-5959.89Sister chromatid cohesion protein PDS5-like n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1935718..1936281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8325.t1Gchil8325.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1935718..1936281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8325.t1 ID=Gchil8325.t1|Name=Gchil8325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=188bp
MMTYTLIRPDRGSKLSKSRCRECIHSNKSDSDAIRRLGKDLAAKLDSFTG
EIEATVAPVAFLSQLAKYAPTSFKSCVLECFDFSRALLSGTMNGVIHSAQ
EADDESETLTADLQEMKKTLSENHIFGPETGFLAAEMLDRRSLCTAELVQ
RAVKLLVYTLAFQGDAESIAVIDILVRICYDTQGNVF*
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