Gchil8323.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8323.t1
Unique NameGchil8323.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length150
Homology
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BLAST of Gchil8323.t1 vs. uniprot
Match: A0A542W2V5_ZYMMB (Putative AlkP superfamily pyrophosphatase or phosphodiesterase n=1 Tax=Zymomonas mobilis TaxID=542 RepID=A0A542W2V5_ZYMMB)

HSP 1 Score: 55.8 bits (133), Expect = 2.850e-6
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:    3 HLRGPNSLEMNDEFVAVDNAIKTLLSKLSDAELEANLVIVSDYGIKEISKDRRVEITHLMEEGTVQDIS 71
            HL GP+S E+N+  V VD AI  L+  L    ++ANLVIVSD+G+   S DR + +  +++ G  + I+
Sbjct:  221 HLYGPDSKEVNENLVKVDQAIGQLVQGLKQRGVKANLVIVSDHGMAATSPDRVIALNKIVDSGAYRVIT 289
The following BLAST results are available for this feature:
BLAST of Gchil8323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A542W2V5_ZYMMB2.850e-640.58Putative AlkP superfamily pyrophosphatase or phosp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1360.180coord: 48..77
e-value: 2.1E-10
score: 42.0
IPR017850Alkaline-phosphatase-like, core domain superfamilyGENE3D3.40.720.10Alkaline Phosphatase, subunit Acoord: 2..47
e-value: 2.1E-10
score: 42.0
IPR017850Alkaline-phosphatase-like, core domain superfamilySUPERFAMILY53649Alkaline phosphatase-likecoord: 2..65
IPR002591Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferasePFAMPF01663Phosphodiestcoord: 2..72
e-value: 1.0E-9
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1883123..1883572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8323.t1Gchil8323.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1883123..1883572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8323.t1 ID=Gchil8323.t1|Name=Gchil8323.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=150bp
MSHLRGPNSLEMNDEFVAVDNAIKTLLSKLSDAELEANLVIVSDYGIKEI
SKDRRVEITHLMEEGTVQDISSSYLQKNSKLSSSDVYSPFETLVYVRDGA
SRGCSPVAHCLRLPPFITTLVGGAQTLHLYQSACQRNLKTNTKFAVRGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017850Alkaline_phosphatase_core_sf
IPR002591Phosphodiest/P_Trfase