Gchil8283.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8283.t1
Unique Name	Gchil8283.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	441

Homology

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BLAST of Gchil8283.t1 vs. uniprot
Match: A0A2V3IQQ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ0_9FLOR)

HSP 1 Score: 444 bits (1142), Expect = 4.050e-151
Identity = 224/431 (51.97%), Postives = 278/431 (64.50%), Query Frame = 0

Query:   14 LLPITVAQRCNLVYCTRFGQRAECVYQSDLFPCALWHSLETRVNPGLCDSDCPLQCDPADRRPIASDGKVYCTECALRYASCDSRFVVYGPINFGSPSDLPFAPMGVGVTPPPTPSPSSLPLVELDSTMPIPSIVPLPSPANLSIGPSEMGQSMVASTLMPSEALEGSPIPIQSPMADDSVESPMPSSPEDYFTGSPEE---MALSCEGELNIFERVECCMKLDIGCIQAGQDCSTSGSLFPPVPCAQGLECIISDPGFPAADRPNRGTCSANTKAMGNYESEEPEEPSESPIIARPSGELSA-GAFCSTQGGLFPAPSCKSGLFCDVFDSGLPAADVPNRGVCRPVGSTPLTVALETPSPNVPIECQGDLDNLTLRTCCLDSGVRCLRRGQLCSSAGSRLPPIPCEAGLFCRIFDPGFPAVDIPNRGVCL 440
            LL +  AQ CNL +C+ +GQR EC + + + PCA+WH+L T  NP LCD+ CP  C PAD RPI SDG++YCT CALRYASC S+F VYGP+NFG+PSDLP AP+ + ++    PS S+ PL E   T P+  + P                               S +P      DD  ESPMP+ PE+    SPE+   + L+CEG LNIF+R++CC + DI C+Q GQ CST+GSL PPVPCA+GL C++ DPGFPAADRP+RG C + T                   I  PS  L A G FCS+ G  FP+P C  GLFCD+F +G PAADVPNRGVCRPVG TP+ +  ETP PN+P  C G+LD+L LR CCL+SGVRCL+RGQ+CS+ GSR+PP+PC  GL CRIF  GFPA DIPNRGVCL
Sbjct:   13 LLSLAYAQTCNLPFCSYYGQRRECSFGTQVIPCAMWHTLATAQNPSLCDATCPTACVPADMRPIGSDGEIYCTPCALRYASCMSKFTVYGPVNFGTPSDLPMAPLDLAISSTEKPSVSASPLAE---TQPV--VAPRXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXSELPF-----DDIDESPMPTMPEESPILSPEQSPLLPLTCEGTLNIFQRIDCCNQFDIACVQEGQLCSTTGSLAPPVPCAKGLTCVVFDPGFPAADRPDRGICRSGT------------------AITTPSPTLLAEGEFCSSAGSNFPSPPCGPGLFCDIFSNGFPAADVPNRGVCRPVGRTPIALVEETPVPNMPPTCVGELDSLALRNCCLESGVRCLQRGQICSTEGSRIPPVPCALGLTCRIFSTGFPAADIPNRGVCL 414

[Close]

BLAST of Gchil8283.t1 vs. uniprot
Match: A0A7S1RA37_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RA37_ALECA)

HSP 1 Score: 58.5 bits (140), Expect = 4.270e-7
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0

Query:  397 LRRGQLCSSAGSR-LPPIPCEAGLFCRIFDPGFPAVDIPNRGVC 439
            L  G  C+ +G+R  PP+PC AGLFC I DPG P VD+PNRG C
Sbjct:   47 LPEGADCTLSGTRGFPPVPCAAGLFCDITDPGAPDVDLPNRGKC 90

The following BLAST results are available for this feature:

BLAST of Gchil8283.t1 vs. uniprot

BLAST of Gchil8283.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IQQ0_9FLOR	4.050e-151	51.97	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A7S1RA37_ALECA	4.270e-7	59.09	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..305
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..440

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:1099746..1101068 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8283.t1	Gchil8283.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 1099746..1101068 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8283.t1 ID=Gchil8283.t1|Name=Gchil8283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=441bp
MRLGLFSAVLTSVLLPITVAQRCNLVYCTRFGQRAECVYQSDLFPCALWH
SLETRVNPGLCDSDCPLQCDPADRRPIASDGKVYCTECALRYASCDSRFV
VYGPINFGSPSDLPFAPMGVGVTPPPTPSPSSLPLVELDSTMPIPSIVPL
PSPANLSIGPSEMGQSMVASTLMPSEALEGSPIPIQSPMADDSVESPMPS
SPEDYFTGSPEEMALSCEGELNIFERVECCMKLDIGCIQAGQDCSTSGSL
FPPVPCAQGLECIISDPGFPAADRPNRGTCSANTKAMGNYESEEPEEPSE
SPIIARPSGELSAGAFCSTQGGLFPAPSCKSGLFCDVFDSGLPAADVPNR
GVCRPVGSTPLTVALETPSPNVPIECQGDLDNLTLRTCCLDSGVRCLRRG
QLCSSAGSRLPPIPCEAGLFCRIFDPGFPAVDIPNRGVCL*