Gchil8278.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8278.t1
Unique NameGchil8278.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length112
Homology
BLAST of Gchil8278.t1 vs. uniprot
Match: A0A2V3IM79_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM79_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 5.850e-28
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:   13 PVDWDRLESIPLVRREAPPESGEDYWMDATSAQSEATTDE-RRDASQIDQQLKDKLREEVVRPYAQNWILWISLGVMALVLAVWAVGGVDTLPIISVPDL 111
            P++WD+LES+PLVR +A PESGEDYW+D T   S+A   + R     I+  LK KL+ EVV PY+ NWIL   + V  LVLAVW  GG+DT+PII+VPDL
Sbjct:   40 PLEWDKLESVPLVRSDASPESGEDYWVDPTVTLSDADPGKVRAKKKSIEPALKRKLKSEVVSPYSDNWILRAVVVVALLVLAVWKFGGLDTVPIITVPDL 139          
BLAST of Gchil8278.t1 vs. uniprot
Match: A0A7S1TJD1_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJD1_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 6.010e-12
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   14 VDWDRLESIPLVRREAPPESGEDYWMDATSAQSEATTDE----------RRDASQIDQQLKDKLREEVVRPYAQNWILWISLGVMALVLAVWAVGGVDTLPIISVPDL 111
            +DWD +ES+PLV+R+A PESGEDYW+   + +  A +DE          R     +D+ +K KL +E V+PY  NWI  + + V+ALV     +   +  P I++PDL
Sbjct:  168 LDWDNMESVPLVKRQADPESGEDYWI---APEKGAGSDELVVQTKRKKKRAPRKPVDENVKVKLMKETVQPYKNNWIGVVVVIVLALVFLYNVLP--NEAPRIAIPDL 270          
BLAST of Gchil8278.t1 vs. uniprot
Match: A0A5J4YZZ9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZZ9_PORPP)

HSP 1 Score: 59.7 bits (143), Expect = 2.930e-8
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0
Query:   14 VDWDRLESIPLVRREAPPESGEDYWMDATSAQSEATTDERRDASQIDQQLKDKLREEVVRPYAQNWILWISLGVMALV 91
            +DWD L+S PLVRR   P +GEDY+++    ++     +RR    +D  +++KL+ E + PY  NWI  I + V+ L+
Sbjct:  137 LDWDALDSQPLVRRPVDPATGEDYYIEIDMEKTREPRKKRRPRP-VDANMREKLKRETISPYKNNWIGVIVVVVLVLI 213          
BLAST of Gchil8278.t1 vs. uniprot
Match: B8CA86_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA86_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 1.000e-7
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   15 DWDRLESIPLVRREAPPESGEDYWMDATSAQSEATTDERRDASQIDQQL-----KDKLREEVVRPYAQNWILWISLGVMALVLAVWAVGGVDTLPIISVPDL 111
            D+D +E+ P+ RR+A  E+G DYWMD    + E    +RR A +  + +     K+KLREE+V PY QNWI   S+ ++ L   V     V  +P+I +PDL
Sbjct:   97 DFDDVETRPIRRRDAV-EAGLDYWMDDGDLERER---QRRIAVKNRKAMEGSISKEKLREEMVAPYKQNWIGLFSVLIVVLSTIVTKFPEVMQIPVIPIPDL 194          
BLAST of Gchil8278.t1 vs. uniprot
Match: A0A1Z5JI49_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI49_FISSO)

HSP 1 Score: 53.9 bits (128), Expect = 1.410e-6
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   16 WDRLESIPLVRREAPPESGEDYWMDATSAQSEATTDERRDAS-QIDQQLKD-KLREEVVRPYAQNWILWISLGVMALVLAVWAVGGVDTLPIISVPDL 111
            W++ ES PL+   A  E G+DYW+D  + + E   +  R A+ Q  +Q+ D KL  E++ PY QNWI +IS+ ++ +   +     +   PII +PDL
Sbjct:   72 WEQSESRPLISSNAK-EKGQDYWVDEEALKREQEREAARIAARQSGKQVPDEKLWGEILSPYRQNWIGFISVFIITIAFIIQNFPELVENPIIQLPDL 168          
The following BLAST results are available for this feature:
BLAST of Gchil8278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IM79_9FLOR5.850e-2856.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TJD1_9RHOD6.010e-1238.89Hypothetical protein n=2 Tax=Erythrolobus australi... [more]
A0A5J4YZZ9_PORPP2.930e-837.18Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
B8CA86_THAPS1.000e-739.22Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5JI49_FISSO1.410e-635.71Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..111
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:996164..996499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8278.t1Gchil8278.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 996164..996499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8278.t1 ID=Gchil8278.t1|Name=Gchil8278.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=112bp
MRRRRRRRDDDDPVDWDRLESIPLVRREAPPESGEDYWMDATSAQSEATT
DERRDASQIDQQLKDKLREEVVRPYAQNWILWISLGVMALVLAVWAVGGV
DTLPIISVPDL*
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