Gchil8264.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8264.t1
Unique NameGchil8264.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Homology
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A2V3INH7_9FLOR (60S ribosomal export protein NMD3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH7_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 7.930e-36
Identity = 75/109 (68.81%), Postives = 84/109 (77.06%), Query Frame = 0
Query:    1 MELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVP-RNKSDAGHEGD--DEDYPEIPVEELLEGLNINDGPDE 106
            MELDD+ VET  RKSNLDPIARMAAEQEEFLQDLEQDQ+LR NINIYRD TK     S+MDVD G   P   +N+     +GD  DEDYPE+P+EELLEGLNI DGPD+
Sbjct:  423 MELDDAVVETAYRKSNLDPIARMAAEQEEFLQDLEQDQDLRTNINIYRDPTKFKPIPSQMDVDQGNPVPAATQNRQVVAEDGDEDDEDYPEVPIEELLEGLNIEDGPDD 531          
BLAST of Gchil8264.t1 vs. uniprot
Match: R7QIK8_CHOCR (60S ribosomal export protein NMD3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIK8_CHOCR)

HSP 1 Score: 97.1 bits (240), Expect = 3.480e-21
Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 MELDDSYVETGNRKS-NLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKA--SEMDVDLGTAAPVPRNK----SDAGHEGDDEDYPEIPVEELLEGLNINDGP 104
            MELD+S V+TG+ K   +DPIA+MAAEQEEF+QDLEQD++LR+ INIY+D  K  Q A  ++MDVD G A P P  +    ++ G E   E+YPE+P+EELLEGL + D P
Sbjct:  418 MELDESMVDTGSHKRVPMDPIAKMAAEQEEFMQDLEQDKDLRSTINIYKD-PKRIQPAGGTDMDVDEG-AQPKPVKQVVAAAEDGEEXXXEEYPEVPIEELLEGLVLEDEP 526          
BLAST of Gchil8264.t1 vs. uniprot
Match: UPI001E1DFF5E (LOW QUALITY PROTEIN: 60S ribosomal export protein NMD3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFF5E)

HSP 1 Score: 82.8 bits (203), Expect = 3.690e-16
Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 0
Query:    1 MELDDSYVETG--NRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRD-HTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDETNPN 110
            MELDD+       N++  +DP AR AA+ EEFLQ+LEQD+ELRA IN+Y+D   +   ++S   VD  +   V  +    G E D+++YPE+P+EELL+GL ++D PD  +PN
Sbjct:  423 MELDDAVAAPASINKRGIMDPAAREAADHEEFLQELEQDKELRATINLYKDPEYRQKVESSGRIVDDASYGRVAGHSIAPGTEEDEDEYPEVPIEELLDGLVLDD-PDGGDPN 534          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A1X6NKH2_PORUM (60S ribosomal export protein NMD3 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKH2_PORUM)

HSP 1 Score: 69.3 bits (168), Expect = 1.990e-11
Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 0
Query:    4 DDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVD--LGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPD 105
            DD+ V  G   +  DP  R A E+E FLQDLEQD ELRA++N+YR       + ++   +    T A VP        E DD++YPE+P+EELL+ L+++ G D
Sbjct:  433 DDARVARGGAGAR-DPATRDAEEREGFLQDLEQDAELRAHVNLYRADGATGGEGADGGAEETAMTDADVPAGAGGDADEEDDDEYPEVPIEELLDALDLSKGRD 535          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A2T9XZZ9_9FUNG (60S ribosomal export protein NMD3 n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9XZZ9_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 6.060e-10
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 0
Query:   28 EEFLQDLEQDQELRANINIYR--DHTKPSQKASEMD-VDLGTAAPVPRNKSDAGHE---GDD-EDYPEIPVEELLEGLNINDGPD 105
            E FL++LE+D ELR NIN+Y+  DH K +  +S  + +DL  +     N++D   E   GDD ED P++P+EELLE LN+NDGPD
Sbjct:  436 EHFLRELEEDPELRQNINLYKNPDHFKNNMSSSARNGMDLDGSNTNSGNQADYDSEDLDGDDYEDLPQVPIEELLESLNLNDGPD 520          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A1R1XKY6_9FUNG (60S ribosomal export protein NMD3 (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKY6_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 2.010e-9
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0
Query:   30 FLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNIND 102
            FL+DLE+D ELR NIN+Y+    P ++A  ++ D G         SD   E DDED PE+P+EELL+GLN+N+
Sbjct:  142 FLRDLEEDPELRQNINLYKSDN-PHRQADSIETDGGYIV------SDGESELDDEDLPEVPLEELLDGLNLNE 207          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A1R1X3M2_9FUNG (60S ribosomal export protein NMD3 n=3 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X3M2_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 5.270e-9
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0
Query:   30 FLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNIND 102
            FL+DLE+D ELR NIN+Y+    P ++A  ++ D G         SD   E DDED PE+P+EELL+GLN+N+
Sbjct:  413 FLRDLEEDPELRQNINLYKSDN-PHRQADSIEADGGYIV------SDGESELDDEDLPEVPLEELLDGLNLNE 478          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A1Y2GLG1_9FUNG (60S ribosomal export protein NMD3 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLG1_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 4.630e-8
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0
Query:   22 RMAAEQEEFLQDLEQDQELRANINIYR-DHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPD 105
            R+  + E FL+DLE+D ELRA IN+YR D  KP Q  S MD           N+SD     +DED+PE+ ++ELL+ LN++DGPD
Sbjct:  402 RIEHDYEMFLRDLEEDPELRATINLYRADKPKPVQD-SNMD-----------NESDF----EDEDFPEVQLDELLDNLNLDDGPD 470          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A7S3EE79_9RHOD (60S ribosomal export protein NMD3 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE79_9RHOD)

HSP 1 Score: 59.3 bits (142), Expect = 6.330e-8
Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    5 DSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDE 106
            D  V+ GN +  LD        +E+FL++LEQD +LR  +NIY+D   P+ + +  D +                    ++YP+IP++EL++GLNI DGPDE
Sbjct:  417 DEQVDRGNDREELD--------REQFLRELEQDPDLRLGVNIYKD---PAAEDAMTDAETNP-----------------DEYPDIPLDELIDGLNIEDGPDE 490          
BLAST of Gchil8264.t1 vs. uniprot
Match: A0A7S0G2W6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2W6_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 3.430e-7
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    5 DSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDE 106
            D + + G  +  LD        +E+FL++LEQD ELR  +NIY+D       A ++  D  T               + ++YP+IP++EL+EGLNI +GPDE
Sbjct:  133 DEHFDRGKDREELD--------REQFLRELEQDPELRLGVNIYKDPA-----AEDVMTDAET---------------NPDEYPDIPLDELIEGLNIEEGPDE 206          
The following BLAST results are available for this feature:
BLAST of Gchil8264.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3INH7_9FLOR7.930e-3668.8160S ribosomal export protein NMD3 n=1 Tax=Gracilar... [more]
R7QIK8_CHOCR3.480e-2154.9560S ribosomal export protein NMD3 n=1 Tax=Chondrus... [more]
UPI001E1DFF5E3.690e-1645.13LOW QUALITY PROTEIN: 60S ribosomal export protein ... [more]
A0A1X6NKH2_PORUM1.990e-1141.3560S ribosomal export protein NMD3 n=1 Tax=Porphyra... [more]
A0A2T9XZZ9_9FUNG6.060e-1048.2460S ribosomal export protein NMD3 n=1 Tax=Smittium... [more]
A0A1R1XKY6_9FUNG2.010e-947.9560S ribosomal export protein NMD3 (Fragment) n=1 T... [more]
A0A1R1X3M2_9FUNG5.270e-947.9560S ribosomal export protein NMD3 n=3 Tax=Smittium... [more]
A0A1Y2GLG1_9FUNG4.630e-847.0660S ribosomal export protein NMD3 n=1 Tax=Lobospor... [more]
A0A7S3EE79_9RHOD6.330e-835.2960S ribosomal export protein NMD3 n=3 Tax=Rhodosor... [more]
A0A7S0G2W6_9RHOD3.430e-735.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:967550..967894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8264.t1Gchil8264.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 967550..967894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8264.t1 ID=Gchil8264.t1|Name=Gchil8264.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDH
TKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNI
NDGPDETNPNSTLS*
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