Gchil8260.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8260.t1
Unique Name	Gchil8260.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	152

Homology

[Close]

BLAST of Gchil8260.t1 vs. uniprot
Match: A0A2V3IPW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW6_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 2.370e-48
Identity = 89/113 (78.76%), Postives = 94/113 (83.19%), Query Frame = 0

Query:   39 RQLTARVSHLLDSYLESTLGADVQKSPPVTPAQTEPHASDTQLPFASLRAPAAVDHFKLFKDSQPGVIGRRHRDKRRRLPHSDSSSDEEDAQHMQRLRSVVVSAPLPPPRTHV 151
            RQLTARV+ LLDSYL+STLGA+   S P       P +    LPFASLRAPAAVDHF+LFKDSQPGVIGRRHRDKRRRLP SDSSSDEEDAQ MQRLRSVVVSAPLPPPRTHV
Sbjct:   80 RQLTARVADLLDSYLQSTLGAEPGDSSPXXXXXXAPPS----LPFASLRAPAAVDHFRLFKDSQPGVIGRRHRDKRRRLPDSDSSSDEEDAQRMQRLRSVVVSAPLPPPRTHV 188

The following BLAST results are available for this feature:

BLAST of Gchil8260.t1 vs. uniprot

BLAST of Gchil8260.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IPW6_9FLOR	2.370e-48	78.76	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:923047..923502 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8260.t1	Gchil8260.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 923047..923502 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8260.t1 ID=Gchil8260.t1|Name=Gchil8260.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=152bp
MAARPLKRGRSRTTRRKPPRAPSHSPSPSPHAPPPLQTRQLTARVSHLLD
SYLESTLGADVQKSPPVTPAQTEPHASDTQLPFASLRAPAAVDHFKLFKD
SQPGVIGRRHRDKRRRLPHSDSSSDEEDAQHMQRLRSVVVSAPLPPPRTH
V*