Gchil8242.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8242.t1
Unique Name	Gchil8242.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	521

Homology

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BLAST of Gchil8242.t1 vs. uniprot
Match: R7Q0T5_CHOCR (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0T5_CHOCR)

HSP 1 Score: 194 bits (494), Expect = 2.380e-50
Identity = 93/114 (81.58%), Postives = 108/114 (94.74%), Query Frame = 0

Query:    1 MNRRRQDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDR 114
            MNRRR+D++NTTRIQKELIL+AIDSVNS S TGGYIVYSTCSVLVEENEAV+DYALR RDVKVVE+G+S G+PGFT+MR+HRFHP+L  ++RI+PHIHNLDGFFVCKLKK+SDR
Sbjct:  486 MNRRRKDVENTTRIQKELILAAIDSVNSKSKTGGYIVYSTCSVLVEENEAVVDYALRKRDVKVVEAGISFGVPGFTKMRKHRFHPSLTNSRRIYPHIHNLDGFFVCKLKKMSDR 599

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A7S1UQN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQN0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.960e-41
Identity = 71/118 (60.17%), Postives = 93/118 (78.81%), Query Frame = 0

Query:    7 DLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRKGTGGVNVDE 124
            D+     +QKEL+LSAIDS+N  S TGGY+VYSTCSV V ENE V++YAL  RD+K+V++GL  G PGFTR +  RFHP++ LT+R +PH+HN+DGFFVCK++KLSDRK   GV ++E
Sbjct:    7 DVHKCAHLQKELLLSAIDSLNYKSKTGGYMVYSTCSVSVAENEEVVNYALSKRDIKIVDAGLDFGKPGFTRYQTKRFHPSVALTRRFYPHVHNMDGFFVCKIQKLSDRKPEDGVVIEE 124

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A3P6U0Q2_LITSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Litomosoides sigmodontis TaxID=42156 RepID=A0A3P6U0Q2_LITSI)

HSP 1 Score: 159 bits (402), Expect = 6.400e-40
Identity = 73/112 (65.18%), Postives = 95/112 (84.82%), Query Frame = 0

Query:    6 QDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRKGT 117
            QD+     +Q+ELIL+A+DS+N++S TGGY+VYSTCSVLVEENEAV+DYALR RD K+V  GLS+G+ GFT+ R++RFHP+L+LT+R +PHIHN+DGFFV K KKLS+ K T
Sbjct:  196 QDVQRCHTLQRELILAALDSINANSKTGGYLVYSTCSVLVEENEAVVDYALRKRDCKLVPMGLSIGVEGFTKFREYRFHPSLSLTRRYYPHIHNIDGFFVAKFKKLSNSKAT 307

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A6G0U639_APHGL (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0U639_APHGL)

HSP 1 Score: 153 bits (386), Expect = 3.590e-39
Identity = 72/113 (63.72%), Postives = 91/113 (80.53%), Query Frame = 0

Query:    1 MNRRRQDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSD 113
            M++   DL     +Q+EL+L+AIDS+N  S+TGGY+VYSTCSVL EENE VIDYAL+ RDVK+V++GLS G  GFT +RQHRFHPT+ LT+R +PH HN+DGFFV KLKK S+
Sbjct:  104 MSKDETDLQRCFTLQRELLLAAIDSLNFKSSTGGYLVYSTCSVLAEENECVIDYALKKRDVKLVDTGLSFGTEGFTNLRQHRFHPTMKLTRRFYPHTHNMDGFFVAKLKKFSN 216

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A2U1L321_ARTAN (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L321_ARTAN)

HSP 1 Score: 147 bits (370), Expect = 3.990e-38
Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    7 DLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRK 115
            D+ N++R+QKEL+L+AID V+++S TGGY+VYSTCS+LV ENE  IDYAL+ RDVK+V  GL  G PGF R R+ RFHP+L  T+R +PH+HN+DGFFV KLKK+S+ K
Sbjct:   52 DVHNSSRLQKELLLTAIDMVDANSKTGGYVVYSTCSMLVIENEDAIDYALKKRDVKLVPCGLDFGRPGFVRFRERRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNSK 160

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A0J9XS18_BRUMA (BMA-NOL-1 (Fragment) n=2 Tax=Onchocercidae TaxID=6296 RepID=A0A0J9XS18_BRUMA)

HSP 1 Score: 155 bits (392), Expect = 4.400e-38
Identity = 72/117 (61.54%), Postives = 94/117 (80.34%), Query Frame = 0

Query:    6 QDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRKGTGGVNV 122
            QD+     +Q+ELIL+A+DS+N++S TGGY+VYSTCSVLVEENEAV+DYALR RD K+V  GL VG+ GFT+ R++RFHP+L LT+R +PH+HN+DGFFV K KKLS+ K     N+
Sbjct:  340 QDVQRCHTLQRELILAALDSINANSKTGGYLVYSTCSVLVEENEAVVDYALRKRDCKLVPMGLDVGVQGFTKFREYRFHPSLCLTRRYYPHVHNIDGFFVAKFKKLSNSKSAVCYNI 456

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A7S3FNX7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNX7_9CHLO)

HSP 1 Score: 154 bits (388), Expect = 5.210e-38
Identity = 72/112 (64.29%), Postives = 92/112 (82.14%), Query Frame = 0

Query:    2 NRRRQDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSD 113
            +R  +D+  T +IQKEL+LSAID V++DS TGGY+VYSTCS+LVEENE V+DYALR R+VKVV +GL  G   FT+ RQHR HP+++  KR +PH+HN+DGFFVCKLKKLS+
Sbjct:  247 SRSAEDIWKTVKIQKELLLSAIDMVDADSKTGGYVVYSTCSILVEENELVVDYALRRRNVKVVSTGLDFGQDAFTKFRQHRVHPSISKAKRYYPHVHNIDGFFVCKLKKLSN 358

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A2A2L5Z1_9BILA (SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2L5Z1_9BILA)

HSP 1 Score: 148 bits (374), Expect = 1.060e-37
Identity = 67/115 (58.26%), Postives = 93/115 (80.87%), Query Frame = 0

Query:    1 MNRRRQDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRK 115
            M++  QD+     +Q+ELIL+A+D++++ S TGGY+VYSTCSVLVEENEAV+ YAL  RD K+V +GL +GIPG+T+ R +RFHP+L LT+R +PH+HN+DGFFV K+KKL + K
Sbjct:   88 MSKDSQDIQRRHTLQRELILTALDALDAKSPTGGYLVYSTCSVLVEENEAVVQYALSKRDCKLVPTGLEIGIPGYTKFRDYRFHPSLELTRRYYPHVHNIDGFFVAKIKKLKNAK 202

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A1I7V5U5_LOALO (Nucleolar protein n=2 Tax=Loa loa TaxID=7209 RepID=A0A1I7V5U5_LOALO)

HSP 1 Score: 157 bits (398), Expect = 1.460e-37
Identity = 76/140 (54.29%), Postives = 106/140 (75.71%), Query Frame = 0

Query:    6 QDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRKGTGGVNVDEPQMKDTGESMTQDGKMKQKNS 145
            QD+     +Q+ELIL+A+DS+N++S TGGY+VYSTCSVLVEENEAV+DYALR RD K+V  GL +G+ GFT+ R++RFHP+L+LT+R +PH+HN+DGFFV K KKLS+ K      + + ++KD    +T   K++  NS
Sbjct:  559 QDVQRCHTLQRELILAALDSINANSKTGGYLVYSTCSVLVEENEAVVDYALRKRDCKLVAMGLDIGVQGFTKFREYRFHPSLSLTRRYYPHVHNIDGFFVAKFKKLSNSKSAKNAGLSD-ELKDK-NPITSKNKIQNGNS 696

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BLAST of Gchil8242.t1 vs. uniprot
Match: A0A0R3QK69_9BILA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Brugia timori TaxID=42155 RepID=A0A0R3QK69_9BILA)

HSP 1 Score: 155 bits (393), Expect = 1.750e-37
Identity = 73/117 (62.39%), Postives = 94/117 (80.34%), Query Frame = 0

Query:    6 QDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEAVIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNLDGFFVCKLKKLSDRKGTGGVNV 122
            QD+     +Q+ELIL+A+DS+N++S TGGY+VYSTCSVLVEENEAV+DYALR RD K+V  GL VG+ GFT+ R++RFHP+L LT+R +PH+HN+DGFFV K KKLS+ K     NV
Sbjct:  480 QDVQRCHTLQRELILAALDSINANSKTGGYLVYSTCSVLVEENEAVVDYALRKRDCKLVPMGLDVGVQGFTKFREYRFHPSLCLTRRYYPHVHNIDGFFVAKFKKLSNSKSAVCYNV 596

The following BLAST results are available for this feature:

BLAST of Gchil8242.t1 vs. uniprot

BLAST of Gchil8242.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7Q0T5_CHOCR	2.380e-50	81.58	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A7S1UQN0_9STRA	4.960e-41	60.17	Hypothetical protein (Fragment) n=1 Tax=Grammatoph...	[more]
A0A3P6U0Q2_LITSI	6.400e-40	65.18	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A6G0U639_APHGL	3.590e-39	63.72	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A2U1L321_ARTAN	3.990e-38	62.39	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A0J9XS18_BRUMA	4.400e-38	61.54	BMA-NOL-1 (Fragment) n=2 Tax=Onchocercidae TaxID=6...	[more]
A0A7S3FNX7_9CHLO	5.210e-38	64.29	Hypothetical protein n=1 Tax=Chloropicon roscoffen...	[more]
A0A2A2L5Z1_9BILA	1.060e-37	58.26	SAM_MT_RSMB_NOP domain-containing protein n=2 Tax=...	[more]
A0A1I7V5U5_LOALO	1.460e-37	54.29	Nucleolar protein n=2 Tax=Loa loa TaxID=7209 RepID...	[more]
A0A0R3QK69_9BILA	1.750e-37	62.39	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023267	RNA (C5-cytosine) methyltransferase	PRINTS	PR02008	RCMTFAMILY	coord: 33..49 score: 59.81 coord: 93..110 score: 40.65
IPR023267	RNA (C5-cytosine) methyltransferase	PANTHER	PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	coord: 2..118
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PFAM	PF01189	Methyltr_RsmB-F	coord: 2..109 e-value: 1.4E-19 score: 70.5
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 1..111 score: 23.941685
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 1..227 e-value: 8.1E-26 score: 92.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..237
None	No IPR available	PANTHER	PTHR22807:SF30	28S RRNA (CYTOSINE(4447)-C(5))-METHYLTRANSFERASE-RELATED	coord: 2..118
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 9..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:850428..852918 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8242.t1	Gchil8242.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 850428..852918 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8242.t1 ID=Gchil8242.t1|Name=Gchil8242.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=521bp
MNRRRQDLDNTTRIQKELILSAIDSVNSDSATGGYIVYSTCSVLVEENEA
VIDYALRNRDVKVVESGLSVGIPGFTRMRQHRFHPTLNLTKRIHPHIHNL
DGFFVCKLKKLSDRKGTGGVNVDEPQMKDTGESMTQDGKMKQKNSAKAHN
DGLKKSNGISRSSGVQGKSVSALKPKGHSPDSHQKSRRKRLRTRQTTPSK
NENSKEIGKKVASSTNGSKNQGNQDQDSKSSSAGTAPDTATAVGGAAVPA
CGDVINGSSCCSGALGGRAVTNDVVAVFGMDDGIPSEASVGTNNGSGVTL
IPVTTPPPVEVFVAAEPTVLAPSEAPPPPPVPPFLSPPPPPEPPPPFAPK
PPPPPLPGAPEPKPNPLAADWVWFERPLDISPMAEPPPQDPVVHPDPTAD
DPPETPTPPPDPPRAVPEPPPDPAPPFAPKPPPPPEPGEPEPNPNPFVPE
AEGFAVCEVAVGETGAVATGDASEDGYGFLYSVGKMITRQMETGFNFARS
ENDIHGSGNHFFVVDELGRN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023267	RCMT
IPR001678	MeTrfase_RsmB/NOP2
IPR029063	SAM-dependent_MTases