Gchil8239.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8239.t1
Unique NameGchil8239.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length221
Homology
The following BLAST results are available for this feature:
BLAST of Gchil8239.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..220
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 174..201
e-value: 4.4E-7
score: 31.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 146..173
e-value: 4.6E-5
score: 25.3
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 177..200
e-value: 0.085
score: 22.0
coord: 148..171
e-value: 0.22
score: 20.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 150..171
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 179..200
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 148..176
score: 11.385298
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 177..205
score: 10.242228
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 146..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:840133..841667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8239.t1Gchil8239.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 840133..841667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8239.t1 ID=Gchil8239.t1|Name=Gchil8239.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=221bp
MQILFGSLKEHVRRPVLVHPSFISMANIGLGANSNGLNGSMVPSFQHLLN
HIENRTEQPVSLKPSSWDVKIEETADHVFGSPVSNISPSCSSTTSVRADS
FEPISGQDSNVCSSRQDFWTIVLGPSQSLPPEKPESKIQPSGSLQKPHAC
SSCPLRFKKRCNLQSHVRSVHEKLRPFSCGVCLRRFGRKSNCAKHMRLVH
RLRDSEVRVLPAKVALDIKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf