Gchil8231.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8231.t1
Unique NameGchil8231.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length182
Homology
The following BLAST results are available for this feature:
BLAST of Gchil8231.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001807Chloride channel, voltage gatedPFAMPF00654Voltage_CLCcoord: 1..127
e-value: 1.8E-8
score: 34.0
NoneNo IPR availableGENE3D1.10.3080.10Clc chloride channelcoord: 1..76
e-value: 5.2E-8
score: 34.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 130..147
IPR014743Chloride channel, coreSUPERFAMILY81340Clc chloride channelcoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:785096..785780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8231.t1Gchil8231.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 785096..785780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8231.t1 ID=Gchil8231.t1|Name=Gchil8231.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=182bp
MASACAVGLASSFGTPIGGVLYALETRASRFQSVRQRRRHLLAFAVSLKR
WFTEPDFVQQAMTPPDFMTRHILVSHQHFLRRYSSNIAVLECGYYFRTGI
QALSLILMSLTAMVFAGNNSTVEIYARNTAALSPFAIFSICISEVILRDA
ELDYKSFILRGEEDELISGLQPQLIATDRYP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001807Cl-channel_volt-gated
IPR014743Cl-channel_core