Gchil8213.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8213.t1
Unique NameGchil8213.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length561
Homology
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A2V3IPZ3_9FLOR (DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPZ3_9FLOR)

HSP 1 Score: 657 bits (1696), Expect = 4.570e-232
Identity = 331/418 (79.19%), Postives = 367/418 (87.80%), Query Frame = 0
Query:   69 ETSIPASTTALFTQSTFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRAREEE 486
            ET IPA TT LFT STF ALGL E I +HL +  I  PTGIQSRG+PPILGGA VILGAATGSGKTFAYLLPV+QQLKQAEQ R E D PLRVA+RPRALV++PTRELAEQ+E VAR+LSHVVKFRV+G LA GPGS RKL++RLN PVD++V TTGRLLQLL+E +IDVRFVKHV+IDEVDTL DKGF+TEL KILWWC+GA S+I N PQF+AAGATHPRAAE IY QV PNAKRINVDLH+APRGLEQRFV VG NTKVQEL+SFLN T+  R       RMMVFCNT+DSCRFVDHFL E+G+ TSCIHGD+PL RREKEYESFRNG+KP+LICTDMAARGLDNL+VDHVVLFDFPNSAVDYLHRAGRTARAGA+GRVTSFV KKD+RLARAIQRAG+HG DALESAR +RE+E
Sbjct:   15 ETHIPAPTTPLFTGSTFGALGLEEGILDHLGSFNIKTPTGIQSRGVPPILGGADVILGAATGSGKTFAYLLPVVQQLKQAEQFRGEEDAPLRVARRPRALVLVPTRELAEQVEQVARALSHVVKFRVIGALAGGPGSMRKLKERLNYPVDVLVATTGRLLQLLEERLIDVRFVKHVVIDEVDTLCDKGFDTELNKILWWCKGANSNIVNHPQFIAAGATHPRAAEQIYSQVFPNAKRINVDLHRAPRGLEQRFVYVGANTKVQELISFLNATE--RDGALTGGRMMVFCNTMDSCRFVDHFLVESGYNTSCIHGDVPLERREKEYESFRNGQKPLLICTDMAARGLDNLKVDHVVLFDFPNSAVDYLHRAGRTARAGATGRVTSFVLKKDMRLARAIQRAGLHGYDALESARVSREQE 430          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A7S2ZSA0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSA0_9RHOD)

HSP 1 Score: 384 bits (987), Expect = 1.430e-124
Identity = 210/441 (47.62%), Postives = 299/441 (67.80%), Query Frame = 0
Query:   43 RNRAPTQCLSSSAVAVDVESDVKNRFETSIPASTTALFTQSTFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRAR 483
            +NRA    L+  ++AV  E   +N          T  F+++ F +LGLS ++   LE + I  PT +Q++ IP I GGA V++GAATGSGKT +YLLPV+Q++K  EQ+++ +    RV +RPRA++++PTRELAEQ+  V++SLSH  KFR V  L  G  S +K ++ L+SPVDL++ T GRL+Q ++   +D   ++++I+DEVDTLF+ GF  +L+ I+      K + +   QF+AAGATHP +A  +Y +++P+AK INVDLHKAP GL QRF+   P  K +EL + L   D +     +  R+++F NT +SCRF+DHFL+E  ++TSCIHG++P  RR  E++ F + +  +L+ TD+AARGLDNL VDHV+LFDFP S VDY+HRAGRTARAGA GRV+SFV KKD  LA AI++A     DAL  A + R
Sbjct:   35 KNRA----LARPSMAVFAEKSTEN--------GETGFFSKAGFQSLGLSNELAAALEDVGICRPTNVQTKSIPAISGGADVVVGAATGSGKTLSYLLPVLQKMKDQEQLQDFN----RVPRRPRAILLVPTRELAEQVLRVSKSLSHNFKFRAVA-LVGGNSSLKKQKEALSSPVDLVIATAGRLMQHVNAFNVDFLDLQYIILDEVDTLFEGGFANDLESIVKQVRKRKGE-DCSLQFIAAGATHPTSARQLYTKLMPSAKYINVDLHKAPPGLTQRFIHTTPGEKTRELTALLG--DAENDGTLRGGRIIIFTNTTESCRFLDHFLNEKDYSTSCIHGEMPRDRRGIEFQKFADRKTQLLVGTDVAARGLDNLAVDHVILFDFPASPVDYIHRAGRTARAGAKGRVSSFVTKKDRTLAEAIEQANKDETDALAQAHQKR 455          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A5J4YKV9_PORPP (DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV9_PORPP)

HSP 1 Score: 374 bits (960), Expect = 2.530e-119
Identity = 216/485 (44.54%), Postives = 305/485 (62.89%), Query Frame = 0
Query:   40 VLVRNRAPTQ---CLSSSAVAVDVESDVKNRFETSIPAST-----TALFTQ--STFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMR------------------NEHDPPLRVA-----KRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCE-----GAKS-DINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRAREE 485
            + VR R   Q   C   + +A ++ + V+     S+PA+       A F+   + F ALG+ + + + L    ++ P+ IQ+RGI P L GASVI+GAATGSGKT AYLLP+IQ++K +E ++                     +P  R       +RPRA+++LPTREL +Q+  VA+ LSH  K RVV  L    G   +      +PVD++VTT+GRLLQ L+++ ID+   + +++DEVDT+FD+GF  EL+++          G ++ +++   QF+A GATHP+AAE++Y+   PNAKRINVDLH+ P+GL QRF++V PN K  EL+SFL  +  K     +  RM++F N+I+SCRFVDHFLSE G +TSC+HG IP   R   ++ F++G   +L+CTD+AARGLDNL VDHVV+FDFP +AVDY+HRAGRTARAG +G VTS V KKD RLA+ ++       DALE     R E
Sbjct:   41 IAVRRREAVQTRMCTEGATIAEEIPAAVEE-LRGSLPAAPHEAVDEAFFSAHLNGFGALGIGQPLCDALAQGGVSRPSVIQARGIVPALAGASVIIGAATGSGKTLAYLLPIIQRIKNSEALQVLPNDGMDAEDDLDSFMDGSAEPATRARAQRAPRRPRAIIMLPTRELGQQVFEVAKQLSHFEKCRVVSLLGGASGLKAQTDALARAPVDIVVTTSGRLLQHLEKNTIDLVETEVIVLDEVDTMFDEGFGPELERVFGRLRRRLRSGTQAKEMSTDVQFIAVGATHPKAAEELYQVHFPNAKRINVDLHRTPKGLTQRFINVKPNEKTAELLSFLGNSASKAA--LRGGRMIMFTNSIESCRFVDHFLSEHGFSTSCMHGKIPAETRAANFQQFKSGVTQILVCTDIAARGLDNLAVDHVVMFDFPTTAVDYIHRAGRTARAGRAGLVTSLVTKKDERLAKVLELNSRVREDALEKELEKRNE 522          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A7J7IMK6_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMK6_9RHOD)

HSP 1 Score: 368 bits (944), Expect = 1.770e-117
Identity = 215/433 (49.65%), Postives = 283/433 (65.36%), Query Frame = 0
Query:   67 RFETSIPASTTALFTQSTFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQM---------------RNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRL-NSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLF-DK-GFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVG-PNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLD-NLRVDHVVLFDFPNSAVDYLHRAGRTARA-GASGRVTSFVGKKDLRLARAIQRAG-IHGIDALE 477
            R  +S P+S + L  Q++FA+LGL  ++   L    I +PT IQ R IP +LGGAS I+G+ATGSGKT AYLLP++Q+LK  EQ+               R EH  PLR    PRAL++ PTRELA+Q+  V + LSH +K R     A+G G  RK+R +L + P+D++VTT+GRLLQLLDE +I +R V  V++DEVDTL  DK GF  ++++IL           N  QFVA GATHP AA D+Y    P AK + VDLH+ P  L QRF+ VG  N +  E+++ L E  +K+       R+MVFCNT+DSCRF+DHFL E G  T+  HGDIP  +RE EYE+F  GE+ +L+CTD+AARGLD N ++DHV+LFDFP +AVDYLHRAGRTAR    +G VTS V KKD+ LA  ++ A  I G D ++
Sbjct:   97 RARSSAPSSASFLL-QASFASLGLFPELVAALSADGIESPTSIQIRAIPALLGGASAIVGSATGSGKTLAYLLPIMQRLKIEEQLAMQEVETGHAAEMIRRGEH--PLRKPGAPRALILTPTRELADQVLRVCKQLSHYIKIRA----ASGLGIRRKVRAQLEDQPIDVLVTTSGRLLQLLDEGLIRMRAVHTVVLDEVDTLLLDKSGFGADIRQIL-------RRTRNVQQFVAVGATHPTAARDLYADFFPKAKLLTVDLHQTPANLRQRFIQVGGSNGRTDEILALLKEEAHKKTRSLSGGRVMVFCNTVDSCRFLDHFLQEHGFTTANYHGDIPKEKREFEYEAFARGERQILVCTDIAARGLDYNHKIDHVILFDFPRTAVDYLHRAGRTARGPSGAGTVTSLVTKKDMPLATLVEEATRIEGADIVQ 515          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A7S0ZAY7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAY7_9RHOD)

HSP 1 Score: 361 bits (927), Expect = 4.100e-114
Identity = 210/462 (45.45%), Postives = 286/462 (61.90%), Query Frame = 0
Query:   85 FAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAE-----QMRNEHDPP-------LRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLN-SPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKP--------------QFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRAREEEQERKIREKE-------AAVQNEMPPSAGETRVD 512
            FA+LG+ E +   L+   +  P+ IQ+R + PIL G S ++GA+TGSGKT  YLLPVIQ LK  E     QM+ + D         +R ++RPR +++ PTRELA+Q+  VA++LSH  K RVV +L  G  S +K  + L  SPVD++++TTGRLLQ ++   ID+   K V+IDEVDT+FD+GF  EL +I+   +  +                     QFVA GATHP  AE++Y    PNAKRIN DLH  PRG+ QRFV+V P  K  EL++ L  T     +G    RM++F NTIDSCRFVDHFL E G  TSCIHG +P   R   ++ F+  +  +L+CTD+AARGLDNL VDHVV+FDFP +AVDYLHRAGRTARAG  G VTS V ++D  LA  ++++     DAL S +   E+ +ER +++K+       AA++ +  P+ G    D
Sbjct:  124 FASLGIGEKLCEALKEQGLIQPSVIQARALVPILSGVSTVVGASTGSGKTLTYLLPVIQALKNEEMTQQMQMKEDSDYSDPSGSWKVRASRRPRVVILAPTRELAQQVFLVAKTLSHYEKCRVV-SLVGGDKSLKKQEEALQRSPVDIVISTTGRLLQHIEAANIDLCECKTVVIDEVDTMFDEGFGPELGRIIQRIKRRQESFQKAKGLSVKEDGETGESIQFVAVGATHPTQAEELYAAAFPNAKRINSDLHVVPRGMLQRFVNVSPQEKTSELLALLGNTPKSSLDGG---RMIIFANTIDSCRFVDHFLQEHGFTTSCIHGGVPAETRASNFKKFQEHKTQLLVCTDVAARGLDNLAVDHVVMFDFPTTAVDYLHRAGRTARAGRKGIVTSLVSRRDASLANVMEKSARMRSDALVSEK---EKRKERHLKQKKDETANRRAAIELKGAPTPGRKNPD 578          
BLAST of Gchil8213.t1 vs. uniprot
Match: M1V5J1_CYAM1 (Similar to ATP-dependent RNA helicase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V5J1_CYAM1)

HSP 1 Score: 344 bits (883), Expect = 2.630e-108
Identity = 202/431 (46.87%), Postives = 271/431 (62.88%), Query Frame = 0
Query:   67 RFETSIPASTTALFTQSTFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQ-------------MRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNS-PVDLMVTTTGRLLQLLDEHMIDVR--FVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSV-GPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLD-NLRVDHVVLFDFPNSAVDYLHRAGRTARA-GASGRVTSFVGKKDLRLARAIQRAG-IHGIDALE 477
            R E S P + T     S+FA+LG+  ++   L+ + I  PT IQ+R +P ILGGASVI+G+ATGSGKT AYLLP++Q+LK  EQ             M      PLR    PRALVI PTRELAEQ+ GV + LSH +K R     A+G G  R +R +L   PVD+++TT+GRLLQLLDE +I +R                + GF  ++++I+           N  QF+A GATHP AA+ +Y++  P AK I VDLH+ P  L QRF+ V G N K  E+++ L E  +K+       R+MVFCNT+DSCRF+D+FL E G  T+  HGDIP  RRE+E+++F  GE+ +L+CTD+AARGLD + ++D V+LFDFP +A+DYLHRAGRTAR    +G VTS V KKDL LA  I+ A  I G+D ++
Sbjct:   69 RSERSAPLNLT-----SSFASLGVFPELVTALDAVGIQTPTAIQTRAVPAILGGASVIIGSATGSGKTLAYLLPIVQRLKSEEQQVVSEMQTEEAAEMMRRGRHPLRRPGAPRALVITPTRELAEQVLGVCKHLSHYIKIRA----ASGLGVRRIVRAQLEEQPVDILITTSGRLLQLLDEQLIRLRSXXXXXXXXXXXXXXXEGGFHDDIRQIM-------GKARNTQQFIAVGATHPTAAQKLYREFCPGAKPITVDLHQTPSNLRQRFIRVSGANGKTDEILALLKEETHKKTRLLSGGRVMVFCNTVDSCRFLDYFLQEHGFTTANYHGDIPKDRREEEFQAFVRGERQILVCTDIAARGLDYDHKIDQVILFDFPRTAIDYLHRAGRTARGPSGTGTVTSLVTKKDLPLASFIEDATRIVGVDLVQ 483          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A7S4BL51_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BL51_CHRCT)

HSP 1 Score: 315 bits (807), Expect = 4.900e-97
Identity = 190/413 (46.00%), Postives = 257/413 (62.23%), Query Frame = 0
Query:   84 TFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVV---GTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCE---------GAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVD-LHKAPRGLEQRFVSV-GPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRA 482
            TF  LG+  +I + LETL + +P  +Q + IP + GGA V+LGA TGSGKT  YL+PV+Q+LK  E        P    +RPRA+V++PTRELA Q+  V RS+   V+  V    G +  GP   RK+ D+   PVDL+V T GRLLQLL +  + +  V+ V+IDEVDT+F+ GF  EL +IL              A   +  + Q +A GATHP+AA  +Y++ L  AK++ V  +H  PR L+QRF++  GP+ KV EL + L + D + G+ S   R+++FCN+ +S RFVDH L E G+AT+  HG +P   R   ++ FR GE  +L+ TD+AARGLDNL V HVV FDFP +A DYLHR GRTARAG SG V S V K D  L RAI+ A   G D +++A RA
Sbjct:   81 TFPELGIRSEICDALETLGVNSPNPLQVQAIPALSGGADVVLGAQTGSGKTLTYLIPVMQRLKADEDFSGVRSKP----RRPRAIVLVPTRELALQVHEVGRSICRQVRLSVSVIHGGVPEGP--QRKIFDK---PVDLLVATPGRLLQLLQKGAVYLGDVRQVVIDEVDTMFEAGFGDELDRILRITTRDLSADPRAAAAETLEERVQHIAVGATHPKAAMALYQKRLGGAKQVMVSGMHSVPRTLQQRFITCKGPDAKVTELRTLLGDPD-ESGSPSL-GRVVLFCNSQNSARFVDHTLVEHGYATANYHGAVPANMRADNFKRFREGEAAVLVTTDVAARGLDNLDVAHVVQFDFPKNAADYLHRCGRTARAGKSGTVYSLVTKHDTELVRAIRGAHSAGEDIVQAAERA 482          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A8J5XPX1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPX1_DIALT)

HSP 1 Score: 307 bits (787), Expect = 1.500e-94
Identity = 180/402 (44.78%), Postives = 240/402 (59.70%), Query Frame = 0
Query:   85 FAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGP-GSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNT--KVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRAGIHGIDALESARRAR 483
            F  LG+  DI   L    I+ P  +Q++ +P + GG  +ILGA TGSGKT  YL+P++Q+LK  E    E  P +    RPRALVI+PTREL EQ++GVA+S+ H VK R  G     P G   KL    N+P+DL+V T GRLL   D   +        ++DEVDT+F+ GF  +L+K+L   +  +     + Q +A GATHP AA+ +Y    P A+ + VD+H  P  L QRFV V   +  K ++L+  L       G G    R +VFCN+ DS RFVDH+L+E  +ATS  HG I    R   +++F+ G   +L+C+D+AARGLD L + HVV FDF  SAVDYLHRAGRTARAG  GRVTS V K D  LAR +QRAG   + +  + R AR
Sbjct:   17 FEELGVRADICEALRAQGISAPNKLQAQALPALRGGGDLILGAQTGSGKTLTYLVPLLQRLKDEEDCAPE--PLVPRPSRPRALVIVPTRELGEQVKGVAKSICHYVKLRSTGISGGVPLGKQAKL---FNTPLDLLVATPGRLLAHADAGHVGFSATSIFVVDEVDTIFEAGFADDLRKLLRLVDSHRH--GERVQHIAVGATHPSAAKRLYADAFPAARELMVDVHTVPTQLTQRFVPVSSQSMDKCEKLIEVLGPPRDDGGLGGV--RTLVFCNSKDSARFVDHYLTERRYATSNYHGGILPEARAANFKAFKEGRSEILVCSDLAARGLDGLDIAHVVQFDFARSAVDYLHRAGRTARAGKRGRVTSLVSKYDAALAREVQRAGEMDVTSQPAKRAAR 409          
BLAST of Gchil8213.t1 vs. uniprot
Match: M2W1A2_GALSU (ATP-dependent RNA helicase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1A2_GALSU)

HSP 1 Score: 291 bits (745), Expect = 9.780e-90
Identity = 168/383 (43.86%), Postives = 238/383 (62.14%), Query Frame = 0
Query:   85 FAALGLSEDIQNHL-ETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVLPNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQ 466
            F +LG+SE     L +   I  PT IQ + IP I GGA+VI+GA TGSGK+ AYL+P+I++LK  E++++     +R  K+PRALV +PTREL EQ+  V ++LSH +KFR V  L  G  S  + +  L   VD++V +  RL++      I    ++ +++DEVD L    F  +L  +L            K QF+A GATHP+    IY++ LPNAK +N  LH  P   +  FV++  +   QEL+S L + + K  N    +R++VFCNT+ SCRFV+H+LSE G+ T   HG+IP  +R+  +  F   +  +LICTD+ ARGLDN+ V+ V+ F+FP   VDY+HRAGRT RAG SG+V SF+ KKDL LARAI+
Sbjct:   17 FLSLGVSETTCKALVDAFDIHIPTAIQRKAIPAISGGANVIVGAETGSGKSLAYLIPIIERLKLQEELQSF----IRKPKKPRALVFVPTRELGEQLLRVLKALSHHIKFRAVSLLG-GRLSFVQQKKSLEENVDIVVCSPSRLVKHAVSGNIYFGDIRFIVLDEVDALLGDDFVRDLDVLL----AKLPKKEEKIQFIAVGATHPKQVFPIYEKYLPNAKLVNDKLHLLPVNTKHVFVNIQGDDATQELISLLQQEEEKE-NPRTSNRIIVFCNTVASCRFVEHYLSERGYHTINYHGEIPPKKRKALFSEFLTQKHVILICTDVGARGLDNVSVNLVLNFEFPTCVVDYIHRAGRTGRAGNSGKVVSFIRKKDLSLARAIE 389          
BLAST of Gchil8213.t1 vs. uniprot
Match: A0A1S4CYD5_TOBAC (DEAD-box ATP-dependent RNA helicase 39-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CYD5_TOBAC)

HSP 1 Score: 293 bits (749), Expect = 1.010e-87
Identity = 181/460 (39.35%), Postives = 271/460 (58.91%), Query Frame = 0
Query:   83 STFAALGLSEDIQNHLETLQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQMRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLATGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVDTLFDKGFETELKKILWWCEGAKSDINNKP-QFVAAGATHPRAAEDIYKQVLPNAKRINVD-LHKAPRGLEQRFVSV-GPNTKVQELVSFLNETDYKRGNGSKDSRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRN--GEKPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRVTSFVGKKDLRLARAIQRA----------GIHGIDALESARRAREEEQERKIREKEAAVQNEMPPSAGET-----RVDRRSKPGASAG 522
            S+F  LGLSE++   L  L I  PT IQS GIP ++ G SV+LG+ TGSGKT AY+LP++Q L+Q E++   H  P    +RPRA+V+ PTREL EQ+  VA+S+SH  +FR   T+ +G G  R   D L  P+D++V T GR+LQ ++E  +    ++++++DE DT+FD+GF  +++K L   +   S   ++  Q V   AT  +A + +  +     + +    LHK        F+ + G   K++ L+  L E    +GN     R+MVFCNT++S R VDHFLSE   +T   HG++P  +R +    F++  G+ P L+CTD+AARGLD L VDHVV+FDFP +++DYLHR GRTAR GA G+VTS V KKDL LA  I+ A           + G+    +  R  E++ +R+   K +  + +   S G++     + D ++ PGA +G
Sbjct:  123 SSFEELGLSEEVMGALGELGIEVPTEIQSIGIPAVIEGKSVVLGSHTGSGKTLAYMLPIVQLLRQEEELHGMHMKP----RRPRAVVLCPTRELCEQVFRVAKSISHHARFR--STMVSGGGRLRPQEDSLGGPIDMIVGTPGRVLQHIEEGNVVYGDIRYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKPGDEGFQTVLVTATMTKAVQKLVDEEFQGIQHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVL-EPSLAKGN-----RVMVFCNTLNSSRAVDHFLSENQFSTVNYHGEVPAEQRVENLAKFKSDEGDCPTLVCTDLAARGLD-LDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLAARIEEAMMKNESLEALSVDGVKRDIARSRITEQKDKREKLVKASNSRGKAKASTGKSSSVGRKTDSKTSPGAKSG 569          
The following BLAST results are available for this feature:
BLAST of Gchil8213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPZ3_9FLOR4.570e-23279.19DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Gra... [more]
A0A7S2ZSA0_9RHOD1.430e-12447.62Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YKV9_PORPP2.530e-11944.54DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Por... [more]
A0A7J7IMK6_9RHOD1.770e-11749.65Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0ZAY7_9RHOD4.100e-11445.45Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1V5J1_CYAM12.630e-10846.87Similar to ATP-dependent RNA helicase n=1 Tax=Cyan... [more]
A0A7S4BL51_CHRCT4.900e-9746.00Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A8J5XPX1_DIALT1.500e-9444.78Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
M2W1A2_GALSU9.780e-9043.86ATP-dependent RNA helicase n=1 Tax=Galdieria sulph... [more]
A0A1S4CYD5_TOBAC1.010e-8739.35DEAD-box ATP-dependent RNA helicase 39-like n=5 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 476..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..560
NoneNo IPR availablePANTHERPTHR47960DEAD-BOX ATP-DEPENDENT RNA HELICASE 50coord: 72..497
NoneNo IPR availablePANTHERPTHR47960:SF19DEAD-BOX ATP-DEPENDENT RNA HELICASE 39coord: 72..497
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 317..454
e-value: 7.11722E-48
score: 161.136
NoneNo IPR availableCDDcd00268DEADccoord: 94..306
e-value: 2.01054E-60
score: 196.509
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 102..320
e-value: 4.2E-36
score: 135.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 114..306
score: 25.234175
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 364..445
e-value: 9.3E-24
score: 94.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 348..445
e-value: 2.9E-24
score: 85.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 329..492
score: 18.729919
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 307..479
e-value: 5.4E-44
score: 151.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 57..306
e-value: 1.8E-58
score: 199.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 164..465
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 107..294
e-value: 6.2E-35
score: 120.5
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 83..111
score: 9.489576

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:696913..698595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8213.t1Gchil8213.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 696913..698595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8213.t1 ID=Gchil8213.t1|Name=Gchil8213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=561bp
MSPPHLPLFVSAWCSTTHHNPQRSSAYFGKKCSQGPTTPVLVRNRAPTQC
LSSSAVAVDVESDVKNRFETSIPASTTALFTQSTFAALGLSEDIQNHLET
LQITNPTGIQSRGIPPILGGASVILGAATGSGKTFAYLLPVIQQLKQAEQ
MRNEHDPPLRVAKRPRALVILPTRELAEQIEGVARSLSHVVKFRVVGTLA
TGPGSTRKLRDRLNSPVDLMVTTTGRLLQLLDEHMIDVRFVKHVIIDEVD
TLFDKGFETELKKILWWCEGAKSDINNKPQFVAAGATHPRAAEDIYKQVL
PNAKRINVDLHKAPRGLEQRFVSVGPNTKVQELVSFLNETDYKRGNGSKD
SRMMVFCNTIDSCRFVDHFLSEAGHATSCIHGDIPLARREKEYESFRNGE
KPMLICTDMAARGLDNLRVDHVVLFDFPNSAVDYLHRAGRTARAGASGRV
TSFVGKKDLRLARAIQRAGIHGIDALESARRAREEEQERKIREKEAAVQN
EMPPSAGETRVDRRSKPGASAGLKRSRFGGGGGGNGAGNGGGGGRGVRRR
RSVGGRQRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif