Gchil8208.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8208.t1
Unique NameGchil8208.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length199
Homology
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A2V3IPW9_9FLOR (Dihydrofolate reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW9_9FLOR)

HSP 1 Score: 270 bits (689), Expect = 1.210e-88
Identity = 125/193 (64.77%), Postives = 148/193 (76.68%), Query Frame = 0
Query:    3 IISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKR 195
            IIS VVAY RVNRVIG R++LPWP L  DM RF++LT  HAIIMGR+TF SD +N  PLPHRR IVLS +  W+PP GVLHA DW EALLLA SGFGAAGY +G+  V  P   RH+FV+GG+SVYKLAL  GCQWVFATEI+G M GD+FFP+LP  +W RV P DCP+HWAS     E G ++SFVTY+++
Sbjct:   59 IISLVVAYTRVNRVIGIRDALPWPRLQADMRRFAKLTYYHAIIMGRKTFESDPINSSPLPHRRNIVLSRNPVWIPPQGVLHAFDWDEALLLADSGFGAAGYHDGSRMVRTPLCNRHIFVLGGQSVYKLALDRGCQWVFATEIDGQMPGDSFFPELPSSEWDRVPPSDCPRHWASEHQFREKGYTFSFVTYKRK 251          
BLAST of Gchil8208.t1 vs. uniprot
Match: UPI0004062917 (dihydrofolate reductase n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI0004062917)

HSP 1 Score: 101 bits (251), Expect = 9.170e-24
Identity = 71/191 (37.17%), Postives = 100/191 (52.36%), Query Frame = 0
Query:    4 ISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRK 194
            I+ VVA+ + NRVIG    LPW HL  DM RF  LT+ HA++MGR+T+ S     +PLP+RR +VLS    +V P                    GA  + + A  +A        FV+GG + Y+ AL    + V+ATEI+ H++GDTFFP+L    W  V   +         P  E+G S+SF+TY +
Sbjct:    2 IACVVAHSK-NRVIGRDGDLPW-HLPADMRRFRELTSGHAVVMGRKTYESLPDRFRPLPNRRNLVLSRDPGFVAP--------------------GAEVFPDLASALA--ACDGDCFVIGGGTTYEQALAVADR-VYATEIDAHVEGDTFFPELGG--WRAVEVSE---------PEAENGHSFSFITYER 156          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A0F7K8Y8_9PROT (Dihydrofolate reductase n=4 Tax=Nitrosomonas TaxID=914 RepID=A0A0F7K8Y8_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 9.860e-23
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 0
Query:    6 AVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWY 163
            +++     NRVIG  N+LPW HLS D+ RF  LT    +IMGR+T+   E  G+PLP R  I+++    +   PG +      EAL                 T  +P   + +F++GG  +Y+  L   CQ ++ TEI+ + +GDTFFP+  Q +WY
Sbjct:    7 SILVAMATNRVIGRNNALPW-HLSADLKRFKALTMGQILIMGRKTY---ESIGRPLPGRINIIVTRQPAF-SVPGTVVTGSIEEAL-----------------TACLPYPDKEIFIIGGAELYQQTLAY-CQHIYLTEIQQNFEGDTFFPEFDQDEWY 141          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A1I3DNK8_9SPHI (Dihydrofolate reductase n=1 Tax=Parapedobacter indicus TaxID=1477437 RepID=A0A1I3DNK8_9SPHI)

HSP 1 Score: 97.8 bits (242), Expect = 2.830e-22
Identity = 67/193 (34.72%), Postives = 95/193 (49.22%), Query Frame = 0
Query:    4 ISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTW-VPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKR 195
            +SA+VA    N  IG  N L W HL ND+  F R T+ HA+IMGR+T+   E  G PLP+RR +V++    + +    V+H+ +      LAH                  T  + VF+VGG  +Y+LAL    + V+ T +  +  GDT+FP L +H W  V  D   KH     P   H   Y+F  Y +R
Sbjct:    6 VSAIVAAAE-NNAIGKDNKLLW-HLPNDLRYFKRTTSGHAVIMGRKTY---ESVGMPLPNRRNLVVTRQEDYTLEDAQVVHSLE----AALAHC-----------------TNEKEVFIVGGAEIYRLALPLTDR-VYLTRVHANFPGDTYFPDLDEHDWVLVSED---KH----DPDERHAYGYTFEVYERR 164          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A1F6TNX7_9PROT (Dihydrofolate reductase n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_65_34 TaxID=1817760 RepID=A0A1F6TNX7_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 2.740e-21
Identity = 65/169 (38.46%), Postives = 85/169 (50.30%), Query Frame = 0
Query:    6 AVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWY-----RVHPDD 169
            +++A    NRVIGN N+LPW  L ND+ RF RLTT HA+IMGR+ +   E  G+PLP RR IV++    +  P G   A    EAL        AAG                +FV+GG  VY  AL    + ++ T + G + GD  FPQL   +W      R  PDD
Sbjct:    3 SIIAALAENRVIGNGNALPW-RLPNDLRRFRRLTTGHAVIMGRKNY---ESIGKPLPERRNIVITRQPDYAAP-GCRMAHSLEEAL-------AAAG------------DDPEIFVIGGAEVYAQALPRARR-LYLTLVHGAVAGDVLFPQLDWSEWTELDRERHEPDD 146          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A1F6TCB8_9PROT (Dihydrofolate reductase n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_64_11 TaxID=1817758 RepID=A0A1F6TCB8_9PROT)

HSP 1 Score: 94.4 bits (233), Expect = 5.850e-21
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 0
Query:    6 AVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQW 162
            +++A    NRVIG  N+LPW  L ND+  F RLTT HAII+GR+ +   E  G+PLP RR +V++  + +   PG L A    EAL +A                        VFV+GG  +Y+  L    + ++ T +   +QGDTFFP+  +++W
Sbjct:    3 SIIAALAENRVIGINNTLPW-RLPNDLKHFRRLTTGHAIILGRKNY---ESIGKPLPERRNVVITRQSGY-EAPGCLVAHSLDEALKMAGDD-------------------AEVFVIGGAEIYQQTLARADR-LYLTLVHAEVQGDTFFPEFDRNEW 134          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A7C9TP62_9BURK (Dihydrofolate reductase n=1 Tax=Ideonella livida TaxID=2707176 RepID=A0A7C9TP62_9BURK)

HSP 1 Score: 92.8 bits (229), Expect = 3.010e-20
Identity = 68/193 (35.23%), Postives = 92/193 (47.67%), Query Frame = 0
Query:    7 VVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGV-LHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKRLPI 198
            +VA    N VIG  N LPW HL  D+  F RLTT HA++MGR+T+ S     +PLP RR +VL+    W        HA D   AL  A +G                     +FV+GG  +Y+ AL      +  TEI   M GD +FP  P+  +  V  +  P      T  H+ G+ ++FVTYR+R  I
Sbjct:   12 LVAAVAQNGVIGLDNRLPW-HLPEDLAHFKRLTTGHAVLMGRKTWDSLPPRFRPLPGRRNLVLTRQPDWQADGAEPCHALDQALALGAAEAG--------------------PLFVIGGAELYRAALP-AADTLVLTEIGQPMAGDAYFPAWPREAFDEV--ERLPG-----TSAHDPGLHFAFVTYRRRARI 175          
BLAST of Gchil8208.t1 vs. uniprot
Match: C6XT74_PEDHD (Dihydrofolate reductase n=2 Tax=Pedobacter TaxID=84567 RepID=C6XT74_PEDHD)

HSP 1 Score: 90.1 bits (222), Expect = 2.110e-19
Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 0
Query:    4 ISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKR 195
            +S VVA    N  IG  N L W HL  D+  F +LT+ H IIMGR+TF  D + G+PLP+RR IV++ S +   P                    GA    N    +A+ TA + VF+VGG  +Y+ A+ +    ++ T +    +GD +FP++ + +W  V  D+ P       P  ++ ++Y+F T  ++
Sbjct:    3 VSIVVAIAE-NNAIGKNNELLW-HLPTDLKHFKQLTSGHTIIMGRKTF--DSI-GKPLPNRRNIVITRSNSLEIP--------------------GAEVVNNIDQALALCTAEKEVFIVGGAEIYRQAM-DKTDKIYLTTVHAGFEGDAYFPEIDRKKWEEV--DNEPHQ-----PDEKNNLAYTFSTLLRK 161          
BLAST of Gchil8208.t1 vs. uniprot
Match: UPI001C0DE62F (dihydrofolate reductase n=1 Tax=Achromobacter sp. GG226 TaxID=2779529 RepID=UPI001C0DE62F)

HSP 1 Score: 89.7 bits (221), Expect = 2.820e-19
Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    4 ISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTY 192
            +S +VAY R NRVIG  N+LPW  L +D+  F R T    I+MGR+T+   E  G+PLP R  +V+S    +    G    +   +AL   H                       +FV+GGE+++ LAL    + + ATEI   ++GDT+FP LP+  W              P P  E+GI++ FVTY
Sbjct:    4 LSLIVAYAR-NRVIGRDNTLPW-RLPSDLAHFKRTTLGKPIVMGRKTW---ESLGRPLPGRHNVVISRDPGYAAQ-GATVVTSLPDALAACHDA-------------------EEIFVIGGEAIFALALPLADRLI-ATEIHEDVEGDTWFPPLPEG-WREAA--------REPQPA-ENGITFDFVTY 156          
BLAST of Gchil8208.t1 vs. uniprot
Match: A0A1V5F884_9BACT (Dihydrofolate reductase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V5F884_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 3.350e-19
Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 0
Query:    6 AVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQTFLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGAAGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQGDTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKR 195
            +++A    N  IGN N LPW HL  D+  F +LTT HA+IMG+ TF  + L   PLP+R+ IVL++  +     G   A+   EAL L                         VF++GG S++K  + +    ++ T I G  Q D +FP++   +W  +  +D P    +P P       Y+F  Y+++
Sbjct:    5 SIIAAVADNYAIGNLNKLPW-HLPADLKYFKKLTTGHAVIMGKHTF--ENLPNGPLPNRKNIVLTSVLSDGICEGYFEANSIEEALELCEK-------------------EDEVFIIGGVSIFKQTI-DLADKMYITWIHGDFQADAYFPKINFEEWEEISREDHPADEKNPYP-------YTFSVYQRK 164          
The following BLAST results are available for this feature:
BLAST of Gchil8208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPW9_9FLOR1.210e-8864.77Dihydrofolate reductase n=1 Tax=Gracilariopsis cho... [more]
UPI00040629179.170e-2437.17dihydrofolate reductase n=1 Tax=Solirubrobacter so... [more]
A0A0F7K8Y8_9PROT9.860e-2334.81Dihydrofolate reductase n=4 Tax=Nitrosomonas TaxID... [more]
A0A1I3DNK8_9SPHI2.830e-2234.72Dihydrofolate reductase n=1 Tax=Parapedobacter ind... [more]
A0A1F6TNX7_9PROT2.740e-2138.46Dihydrofolate reductase n=1 Tax=Candidatus Muprote... [more]
A0A1F6TCB8_9PROT5.850e-2135.67Dihydrofolate reductase n=1 Tax=Candidatus Muprote... [more]
A0A7C9TP62_9BURK3.010e-2035.23Dihydrofolate reductase n=1 Tax=Ideonella livida T... [more]
C6XT74_PEDHD2.110e-1931.77Dihydrofolate reductase n=2 Tax=Pedobacter TaxID=8... [more]
UPI001C0DE62F2.820e-1934.39dihydrofolate reductase n=1 Tax=Achromobacter sp. ... [more]
A0A1V5F884_9BACT3.350e-1930.53Dihydrofolate reductase n=2 Tax=Bacteroidetes TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00070DHFRcoord: 44..55
score: 45.13
coord: 16..26
score: 51.36
coord: 31..39
score: 37.52
coord: 118..132
score: 40.52
NoneNo IPR availablePANTHERPTHR48069:SF3DIHYDROFOLATE REDUCTASEcoord: 4..195
IPR001796Dihydrofolate reductase domainPFAMPF00186DHFR_1coord: 4..172
e-value: 2.0E-31
score: 108.9
IPR001796Dihydrofolate reductase domainPROSITEPS51330DHFR_2coord: 3..194
score: 35.201508
IPR001796Dihydrofolate reductase domainCDDcd00209DHFRcoord: 4..193
e-value: 1.2291E-48
score: 153.833
IPR024072Dihydrofolate reductase-like domain superfamilyGENE3D3.40.430.10Dihydrofolate Reductase, subunit Acoord: 2..195
e-value: 3.5E-41
score: 143.1
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 4..195
IPR012259Dihydrofolate reductasePANTHERPTHR48069DIHYDROFOLATE REDUCTASEcoord: 4..195
IPR017925Dihydrofolate reductase conserved sitePROSITEPS00075DHFR_1coord: 16..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:689694..690290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8208.t1Gchil8208.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 689694..690290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8208.t1 ID=Gchil8208.t1|Name=Gchil8208.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=199bp
MSIISAVVAYCRVNRVIGNRNSLPWPHLSNDMHRFSRLTTNHAIIMGRQT
FLSDELNGQPLPHRRTIVLSTSTTWVPPPGVLHASDWHEALLLAHSGFGA
AGYTNGAHTVAIPTAPRHVFVVGGESVYKLALRNGCQWVFATEIEGHMQG
DTFFPQLPQHQWYRVHPDDCPKHWASPTPVHEHGISYSFVTYRKRLPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001796DHFR_dom
IPR024072DHFR-like_dom_sf
IPR012259DHFR
IPR017925DHFR_CS