Gchil8199.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8199.t1
Unique NameGchil8199.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length189
Homology
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BLAST of Gchil8199.t1 vs. uniprot
Match: A0A2V3IY42_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY42_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 5.720e-29
Identity = 73/138 (52.90%), Postives = 94/138 (68.12%), Query Frame = 0 
Query:   52 RRAFLRV--LASIPLWVAVRKSRAAGTVSEALVELKAAEGALDRLEVLADLSEYDALRQMLRSAPLNRIRAACSTLYRSMPDEKRRRQAEDAYKKLIRSVEDTDSKALRVSRGEIEADVGQLVQGVQKLFYDFSALVE 187
            RR FL    LA +      +++ A  TV+EAL+EL+A   AL+ +  LA  ++YD LR  LR+APLNRIRAA S LYR + D ++R +AE AYK++I++VE  D  ALRVSRGEIE DV +LVQ VQKL  DF AL E
Sbjct:   45 RRRFLTTASLACLYATAGPQRAEALTTVTEALLELRAVREALETIVDLARDTKYDVLRLQLRAAPLNRIRAAGSVLYRGISDSEKRNRAEKAYKEVIQAVERADVTALRVSRGEIEEDVERLVQDVQKLVGDFIALFE 182
The following BLAST results are available for this feature:
BLAST of Gchil8199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IY42_9FLOR5.720e-2952.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableCOILSCoilCoilcoord: 135..155
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 68..182
e-value: 1.6E-6
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:670853..671419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8199.t1Gchil8199.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 670853..671419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8199.t1 ID=Gchil8199.t1|Name=Gchil8199.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=189bp
MTSQKSKSKRAGDTQAFARATAVKVGCVGRSEGASSSARTCARYTTASAS
NRRAFLRVLASIPLWVAVRKSRAAGTVSEALVELKAAEGALDRLEVLADL
SEYDALRQMLRSAPLNRIRAACSTLYRSMPDEKRRRQAEDAYKKLIRSVE
DTDSKALRVSRGEIEADVGQLVQGVQKLFYDFSALVEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf