Gchil8197.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8197.t1
Unique Name	Gchil8197.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	149

Homology

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BLAST of Gchil8197.t1 vs. uniprot
Match: A0A2V3IXZ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXZ0_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 4.610e-52
Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = 0

Query:    2 SETERHQKYIFTGIFSTPERVRARFNAFYQARRIADLSANGKASKADFERYAAQFPEEGAKIKKLHDYTMFTGIGTGLGFVGSTVQMMRMTKTVPLILTGVFVSTVSAHLVADDIGSWILGTYKFDCGRASEKFHEWIYTTKNEE 146
            SE    ++    G +STPERVRARFN  YQ  +  +  +  K S  D ++YAAQFP+E  KI+ + +   FTG+GT LGFV STVQMMR TKTVPL++TGVFVSTV+AH+V+DDI SW+ GTYKFD G A+E+F +W+Y TK E+
Sbjct:    4 SEASPGKRLNLFGYYSTPERVRARFNTVYQIGKCLEYDSKAKISHDDLDKYAAQFPKEAEKIQSMRNVINFTGVGTALGFVASTVQMMRWTKTVPLVMTGVFVSTVAAHVVSDDIASWVYGTYKFDVGAANERFRKWVYMTKKEQ 148

The following BLAST results are available for this feature:

BLAST of Gchil8197.t1 vs. uniprot

BLAST of Gchil8197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXZ0_9FLOR	4.610e-52	55.86	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 94..113
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..93
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 114..148
None	No IPR available	TMHMM	TMhelix		coord: 94..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:668676..669413 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8197.t1	Gchil8197.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 668676..669413 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8197.t1 ID=Gchil8197.t1|Name=Gchil8197.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=149bp
MSETERHQKYIFTGIFSTPERVRARFNAFYQARRIADLSANGKASKADFE
RYAAQFPEEGAKIKKLHDYTMFTGIGTGLGFVGSTVQMMRMTKTVPLILT
GVFVSTVSAHLVADDIGSWILGTYKFDCGRASEKFHEWIYTTKNEESD*