Gchil8195.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8195.t1
Unique NameGchil8195.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length425
Homology
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BLAST of Gchil8195.t1 vs. uniprot
Match: A0A2V3IXZ4_9FLOR (Polycomb protein suz12-B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXZ4_9FLOR)

HSP 1 Score: 369 bits (948), Expect = 6.980e-122
Identity = 204/411 (49.64%), Postives = 270/411 (65.69%), Query Frame = 0 
Query:   21 EAFHKARSLYLDVARLHRHSRIFLPRTLRKTSEQRQK-------LSALPGVEYVSIEPFVTWSQHVPEMRCLWCGDRFYRFSCAAELLLHLRTSHGRFEYDLINSSESKTIRSRHDKEVFLLIHLKLQREGELPLVSPCGLSHPYDMEFMYYKSPGFHNPVRKPARTNPSPSLNGILLNEPHRRPRRSTHEQEES-QDKIKEGGKKKRRGAEIKDKDYRPAKCAKRSVENKKKKKVGKPAFKTLSTAVKEKRLYNSVVQRELLVEEYENGADSDAESESQEEVKWRLRVVDDEIEEYVDTIAVEKLFMNLWNQFVKMEHPVKSDKEIAPACLSFVQKYRKTLIRYNLEVTFLRHLAEFSRMGLLDADGVFDICRVLRNRDMSGPSDGSDEPKFLYGERLLKEGPEGKRIRY 423
            EAFH +R LY  +AR HRH  IFLPRTLR+T +  Q+          +P V Y S E  V W++ V E+RCLWC D FYRFS A EL+ HLRT H +F Y+++ S  +         +  L++ + L R G+   +S       YD E+ Y     F N VR+  RT  +P     LL +  R  R ++     + +D I    KKK       D DYRP +  KR  E KK++K G PAF+++S AV+  RLY+SV+Q+ L ++ Y+ GADSDAES+ Q+E+KWR  +V+DEIEE+ DTIAVEKLFM LWNQF KME+P+++D+++APACL FVQ YRKTL RY+L+VTFLRHL EF+RMG+LDAD VF+I +VLRN+DMSG SDG DEP+FLY ERL  +G +GKR+RY
Sbjct:   22 EAFHASRRLYSALARKHRHEPIFLPRTLRRTFKHPQRDTPYHCFRDEVPDVTYKSSETGVHWNEVVRELRCLWCRDLFYRFSGADELVHHLRTFHSKFHYEVLVSLPNTG-------QASLILSMALSRGGKTDSLSAHETLSDYDKEYEYVDVSAFLNAVRRRTRTKTAPPHRSFLLCDSPRPSRAASRAASRATRDSINLDVKKKAIDKTA-DADYRPTRVTKRLSEGKKRRKAGNPAFRSISAAVQNDRLYHSVLQQPLNLQRYDEGADSDAESDDQDELKWRSEIVEDEIEEFTDTIAVEKLFMCLWNQFAKMENPIRADRDVAPACLRFVQLYRKTLKRYSLQVTFLRHLKEFTRMGVLDADSVFEIMQVLRNQDMSGASDGRDEPRFLYAERLRLDGSDGKRVRY 424
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BLAST of Gchil8195.t1 vs. uniprot
Match: R7QQL2_CHOCR (VEFS-Box domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQL2_CHOCR)

HSP 1 Score: 165 bits (418), Expect = 3.180e-44
Identity = 78/167 (46.71%), Postives = 120/167 (71.86%), Query Frame = 0 
Query:  251 PAFKTLSTAVKEKRLYNSVVQRELLVEEYENGADSDAESESQEEVKWRLRVVDDEIEEYVDTIAVEKLFMNLWNQFVKMEHPVKSDKEIAPACLSFVQKYRKTLIRYNLEVTFLRHLAEFSRMGLLDADGVFDICRVLRNRDMSGPSDGSDEPKFLYGERLLKEGPE 417
            PA+K  + AVKEKRL++S++Q  + +EE++  A+ D++ + +EE +WRL + DDE+EE+ DT+ VEKL MNLWNQF+ M++   +D  +APAC +F +KYR+ + ++NLEVTFLRHL E  R+GLLD+D + D   +LRNRD   P    +  +FL+ ER++++  E
Sbjct:  131 PAYKNAAHAVKEKRLWHSILQHPVSLEEFQ--AEDDSDEDREEEYEWRLHLADDEVEEFEDTLPVEKLLMNLWNQFLVMDYHAYADHRVAPACNAFAKKYRRIIQKFNLEVTFLRHLTELGRIGLLDSDAICDTGMILRNRDTE-PVKEEEGARFLFAERIIRQADE 294
The following BLAST results are available for this feature:
BLAST of Gchil8195.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXZ4_9FLOR6.980e-12249.64Polycomb protein suz12-B n=1 Tax=Gracilariopsis ch... [more]
R7QQL2_CHOCR3.180e-4446.71VEFS-Box domain-containing protein n=1 Tax=Chondru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019135Polycomb protein, VEFS-BoxPFAMPF09733VEFS-Boxcoord: 260..381
e-value: 3.6E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:665758..667098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8195.t1Gchil8195.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 665758..667098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8195.t1 ID=Gchil8195.t1|Name=Gchil8195.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=425bp
MPQISVVASKELHAEHKNAIEAFHKARSLYLDVARLHRHSRIFLPRTLRK
TSEQRQKLSALPGVEYVSIEPFVTWSQHVPEMRCLWCGDRFYRFSCAAEL
LLHLRTSHGRFEYDLINSSESKTIRSRHDKEVFLLIHLKLQREGELPLVS
PCGLSHPYDMEFMYYKSPGFHNPVRKPARTNPSPSLNGILLNEPHRRPRR
STHEQEESQDKIKEGGKKKRRGAEIKDKDYRPAKCAKRSVENKKKKKVGK
PAFKTLSTAVKEKRLYNSVVQRELLVEEYENGADSDAESESQEEVKWRLR
VVDDEIEEYVDTIAVEKLFMNLWNQFVKMEHPVKSDKEIAPACLSFVQKY
RKTLIRYNLEVTFLRHLAEFSRMGLLDADGVFDICRVLRNRDMSGPSDGS
DEPKFLYGERLLKEGPEGKRIRYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019135Polycomb_protein_VEFS-Box