Gchil8188.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8188.t1
Unique NameGchil8188.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length377
Homology
BLAST of Gchil8188.t1 vs. uniprot
Match: A0A2V3IVL7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVL7_9FLOR)

HSP 1 Score: 328 bits (840), Expect = 2.080e-106
Identity = 210/425 (49.41%), Postives = 268/425 (63.06%), Query Frame = 0
Query:    1 MPTGRHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDAQIHQEFDTIKNDLSVTQRQLGQAHSKCDSLQHQNEAYAKKIAQLSTKLAAV-------------TATNLEPS------------------PSTALPASLSA----------VKSREKAYHNQQALVQRLKLDNNELRTTYDNLWKRYQNLH--ATNNHTDNNIEHLSVRLQNAGREACNVSTHVEQRLQITADNINNFRQSVTLRPIVAQKLKQS---IIDEYEQDSDTETELNVIGCAAAADELIATLAAQKVAHERLRNTVLELTKELEQGVEKRQQDANKVQLKFESVEHKLKVAQNAVKEKDLEISDLKKQNTKVLAEYEAISVAHSYSNAELSRIRANNRAKTKERQLVDRHDRND---RPHALTNASENRLNHRKIHFR 376
            MP   HFSTKSIKLLADDI+SNFA  +VD+FL TLA ID+QIHQ+F+  K+DL+ +Q  L  A++KCD+LQ  N  Y  +++ L ++L +V             +    +PS                  PS AL  +  A          + +RE+A+ NQQALV RLKLDN +L+TTY+NL  RYQ     A+N    +NI  LS ++Q+AG+ AC V++ VEQRLQITA N+  FRQSV      A    QS   I DEY+ +SD E + +   C AAAD+LI+TLAAQKVAHERLRNTV++LT ELE   + ++ D        + +  KL    + + EKD +I+DLKKQ  KVLAEY+AISVAHSYSNAELSRIRANNRAKTK+RQ  DRH       RPH L N +ENRL+HRKIHFR
Sbjct:    1 MPPHTHFSTKSIKLLADDIHSNFAAASVDHFLTTLANIDSQIHQQFNVFKSDLAASQAALQAANAKCDALQLDNVRYKAQLSALQSELCSVQPSKQPHQPPEPCSCATADPSAPAPPKNRLHTGLAADHLPSCALRIAALANCTPHRLVQLLIARERAFTNQQALVHRLKLDNADLKTTYNNLLTRYQQKQHSASNALPAHNIHRLSQQIQHAGQTACQVASEVEQRLQITARNLTTFRQSVAPSAPSAPPPTQSTHRIKDEYDNESDAEHDSHATACVAAADQLISTLAAQKVAHERLRNTVVQLTSELESVAQNKKNDT-------QLLSEKLSTTHSKLAEKDSQIADLKKQLNKVLAEYQAISVAHSYSNAELSRIRANNRAKTKDRQFNDRHXXXXXXXRPHGLINGAENRLHHRKIHFR 418          
BLAST of Gchil8188.t1 vs. uniprot
Match: R7QD43_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD43_CHOCR)

HSP 1 Score: 136 bits (343), Expect = 2.940e-32
Identity = 121/328 (36.89%), Postives = 165/328 (50.30%), Query Frame = 0
Query:  113 SREKAYHNQQALVQRLKLDNNELRTTYDNLWKRYQNLHATNN--------HTDNNIEHLSVRLQNAGREACNVSTHVEQRLQITADNINNFR-------QSVTLRPIVA--------------------QKLKQS----IIDEYEQDSDTETELNVIGCA-----AAADELIATLAAQKVAHERLRNTVLELTKELEQGVEKRQQDANKVQLKFESVEHKLKVAQNAVKEKDLEISDLKKQNTK--------------VLAEYEAISVAHSYSNAELSRIRANNRAKTKERQLVDRHDR--NDRP----HALTNASENRLNHRKIHFR 376
            +RE AY  Q  LV+RLK DN EL  TY+ L  RYQ      +          D +I+H+S R+Q AG  AC V++H+E+RL ++A +  + +       + V +R   A                     K KQ+    ++DEYE DS   TEL+ +        AA  EL+ TLA Q+ AH+ LR TVLELTKELE+   ++ ++  K +       H+++VAQ  V     E+   KK                  VLAEYEA+S+AHSYSNAELS+IRA  R           HDR  NDRP    HA+ +  EN L+HR+ HFR
Sbjct:  189 AREGAYRAQSVLVERLKRDNKELMDTYEKLLARYQAKEQARSARGTKQRMSMDEHIKHISFRVQQAGEAACVVASHIERRLSVSARDAKSVQSISGHSGKGVDVRCTGAGNHQSDRRFADISATTTSSQDKRKQAESFTVVDEYENDS-LSTELDCVRRENDRFDAAGKELLRTLAIQQQAHDCLRGTVLELTKELERIEPQKIEEMRKCR-------HEVEVAQKRVAVFGGELKKAKKXXXXXXXXXXXXXXXXXXVLAEYEAVSIAHSYSNAELSKIRAKTR-----------HDRQTNDRPPLRGHAVNHGVENLLHHRRNHFR 497          
The following BLAST results are available for this feature:
BLAST of Gchil8188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVL7_9FLOR2.080e-10649.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QD43_CHOCR2.940e-3236.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availableCOILSCoilCoilcoord: 243..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:641166..642398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8188.t1Gchil8188.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 641166..642398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8188.t1 ID=Gchil8188.t1|Name=Gchil8188.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=377bp
MPTGRHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDAQIHQEFDTIK
NDLSVTQRQLGQAHSKCDSLQHQNEAYAKKIAQLSTKLAAVTATNLEPSP
STALPASLSAVKSREKAYHNQQALVQRLKLDNNELRTTYDNLWKRYQNLH
ATNNHTDNNIEHLSVRLQNAGREACNVSTHVEQRLQITADNINNFRQSVT
LRPIVAQKLKQSIIDEYEQDSDTETELNVIGCAAAADELIATLAAQKVAH
ERLRNTVLELTKELEQGVEKRQQDANKVQLKFESVEHKLKVAQNAVKEKD
LEISDLKKQNTKVLAEYEAISVAHSYSNAELSRIRANNRAKTKERQLVDR
HDRNDRPHALTNASENRLNHRKIHFR*
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