Gchil8178.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8178.t1
Unique NameGchil8178.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length191
Homology
BLAST of Gchil8178.t1 vs. uniprot
Match: A0A2V3IST2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IST2_9FLOR)

HSP 1 Score: 176 bits (446), Expect = 9.080e-53
Identity = 109/165 (66.06%), Postives = 127/165 (76.97%), Query Frame = 0
Query:   26 TQASHEDPHPPHATGHAPWQRDGASHAPPTDPESKAKAEKWSRHKNDDKHSREQXXXXXXXXXXXXXXXXXRLRIERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENGNQRIKEYYRGARFWFFIYTLAFVTWFIVFQVKANTFSNINIVKFSGTSPSGI 190
            T A H D   P A G+APW+R G SH PPTDP ++ KA KW + +N    +RE+ XXXXXXXXXXXXXXXX L  ++LE+NARRMYI GFF LPLVWLVALIY+R+EHKDENGN RIK+YYR ARFWF IYT+ FVTWFIVFQV A+   +INI  F G SPSG+
Sbjct:   35 TTALHADA--PVARGNAPWERSGTSHLPPTDPIAQKKAAKWLK-QNGKPENREERXXXXXXXXXXXXXXXXXLLAQQLESNARRMYIVGFFGLPLVWLVALIYYRQEHKDENGNPRIKQYYRNARFWFIIYTIVFVTWFIVFQVLADELQSINIKFFEGDSPSGL 196          
BLAST of Gchil8178.t1 vs. uniprot
Match: A0A8J4V5U1_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V5U1_9MYCE)

HSP 1 Score: 57.0 bits (136), Expect = 1.640e-7
Identity = 28/77 (36.36%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   97 RLRIERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENGNQRIKEYYRGARFWFFIYTLAFVTWFIVFQVKANT 173
            RL  E++ + A++++I GFF LP VWL+ +++F    K    N++IK Y + +   FF+YT  F+ W  +F V  N+
Sbjct:    8 RLDEEKMLSVAKKLWIVGFFFLPWVWLINVLFFLPYRK--TINEKIKWYLKFSLIGFFVYTSIFMAWMGIFLVNRNS 82          
BLAST of Gchil8178.t1 vs. uniprot
Match: A0A151ZFF0_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFF0_9MYCE)

HSP 1 Score: 55.8 bits (133), Expect = 4.480e-7
Identity = 26/72 (36.11%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  101 ERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENGNQRIKEYYRGARFWFFIYTLAFVTWFIVFQVKAN 172
            ++L+  A++++IAGFF LP VWL+ +++F    K+ N +   K Y + +   FF+YT  F+TW  ++ V  N
Sbjct:   12 QKLKGIAKKLWIAGFFLLPWVWLINVLFFIPYRKEINNDT--KWYLKFSLVGFFVYTGIFMTWMGIYLVNRN 81          
BLAST of Gchil8178.t1 vs. uniprot
Match: A0A6G1S7S2_9ACAR (Gamma-secretase subunit PEN-2 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S7S2_9ACAR)

HSP 1 Score: 53.1 bits (126), Expect = 5.030e-6
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  100 IERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENG---NQRIKEYYRGARFWFFIYTLAFVTWFIVFQ 168
            +E+L N  +R +I GFFALPL+WLV +I+F ++          Q+I+ Y  G+   FF+Y +  + W I FQ
Sbjct:    9 VEKL-NLCKRYFIGGFFALPLLWLVNVIWFSQQAFMRTWFKEQQQIRFYVSGSIVGFFVYMIPIIAWAIYFQ 79          
BLAST of Gchil8178.t1 vs. uniprot
Match: F4QDG4_CAVFA (Gamma-secretase subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QDG4_CAVFA)

HSP 1 Score: 52.8 bits (125), Expect = 6.560e-6
Identity = 27/88 (30.68%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   97 RLRIERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENGNQRIKEYYRGARFWFFIYTLAFVTWFIVFQVKANTFS----NINIV 180
            +L  +++ N A++++I GFF LP VWL+ +++F    K  + +  +  Y + +   FF+Y+  F+TW  ++ V  N +     NI+IV
Sbjct:    8 KLNDDKMRNIAKKLWIIGFFFLPWVWLINILFFFPHRKQLSTD--VFWYLKYSLIGFFVYSTIFMTWMGIYLVNRNNWGASGDNISIV 93          
The following BLAST results are available for this feature:
BLAST of Gchil8178.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IST2_9FLOR9.080e-5366.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A8J4V5U1_9MYCE1.640e-736.36Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A151ZFF0_9MYCE4.480e-736.11Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A6G1S7S2_9ACAR5.030e-638.89Gamma-secretase subunit PEN-2 n=1 Tax=Aceria tosic... [more]
F4QDG4_CAVFA6.560e-630.68Gamma-secretase subunit n=1 Tax=Cavenderia fascicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 110..129
NoneNo IPR availableTMHMMTMhelixcoord: 150..167
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPFAMPF10251PEN-2coord: 104..177
e-value: 5.6E-14
score: 52.3
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPANTHERPTHR16318GAMMA-SECRETASE SUBUNIT PEN-2coord: 74..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:478868..479516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8178.t1Gchil8178.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 478868..479516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8178.t1 ID=Gchil8178.t1|Name=Gchil8178.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=191bp
MPPPRPEDTVDLSLEPPVHPEHPSMTQASHEDPHPPHATGHAPWQRDGAS
HAPPTDPESKAKAEKWSRHKNDDKHSREQRRKERAAERQRRKEEEERLRI
ERLENNARRMYIAGFFALPLVWLVALIYFREEHKDENGNQRIKEYYRGAR
FWFFIYTLAFVTWFIVFQVKANTFSNINIVKFSGTSPSGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019379Gamma_Secretase_Asp_P_PEN2