Gchil8160.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8160.t1
Unique NameGchil8160.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length273
Homology
BLAST of Gchil8160.t1 vs. uniprot
Match: A0A2V3ISR0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR0_9FLOR)

HSP 1 Score: 212 bits (539), Expect = 2.290e-64
Identity = 110/228 (48.25%), Postives = 154/228 (67.54%), Query Frame = 0
Query:   36 RRSTTNLLPSLRILLRPNPGIGLDAYMPFNKQMKLFMSLESYFSGASVVRFGVEPLRFPFLRLQCSPELRLSVRLPLLHVSEFNQLYMGSQLTLFQNGQSPKIDTTGFGEFWQGIKKFVQPIGGVQRRASLGELLLNKNQRRVLRDVLDQTRLRRDMKKSDRQRKHEQFLKDFDGENKLESANDGDVVRDLAEKLKHRYHQRMQLNREMDPPSLSE-SEFGQVGGTEG 262
            RRST  +LP+LR+L RP PG+GLDA +PF K ++ +MSLESYFSG S VRFG+EP +FPF+R QC+PE+RLSVRLPLL +SEFN+ Y GSQLT+  NGQ PK++  GF  F+ G+K F++PI  +QR +S+G LLLN  QR  LR  L++ + +RD + +      ++ LK      +++      +++DL EKL+  +  R  LNRE   P L E S   ++G T+G
Sbjct:   20 RRSTNFMLPTLRVLFRPQPGLGLDARLPFTKHVRWYMSLESYFSGTSAVRFGIEPTKFPFIRFQCAPEVRLSVRLPLLRISEFNRAYFGSQLTIVSNGQVPKLNLNGFAAFYDGLKTFLKPICELQRHSSIGGLLLNDRQREALRKALEKAKTKRDAQANQLIPGRDELLKTHKDNPEIDHEEKARMIKDLREKLQGSWKDR-SLNRETIQPDLDEFSRHQEMGPTKG 246          
BLAST of Gchil8160.t1 vs. uniprot
Match: R7QBT9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBT9_CHOCR)

HSP 1 Score: 135 bits (339), Expect = 1.210e-34
Identity = 72/192 (37.50%), Postives = 111/192 (57.81%), Query Frame = 0
Query:   48 ILLRPNPGIGLDAYMPFNKQMKLFMSLESYFSGASVVRFGVEPLRFPFLRLQCSPELRLSVRLPLLHVSEFNQLYMGSQLTLFQNGQSPKIDTTGFGEFWQGIKKFVQPIGGVQRRASLGELLLNKNQRRVLRDVLDQTRLRRDMKKSDRQRKHEQFLKDFDGEN--KLESANDGDVVRDLAEKLKHRYHQR 237
            +L+RP PG+GLDA +P  K ++  M+LE+Y  G S + FG+E  RFPFL++Q  P  RL++R+P+L V+EF  ++ G  LTL+  G  PK    G+  FW  IK F  P+  +Q R +L   + +  QR+ L++ LD   LRR  +  ++ R   + L  F+     KL+  N  D +  L EK++ +Y  R
Sbjct:    1 MLVRPEPGLGLDARLPMGKHLRCSMALEAYCQGGSAIYFGLESSRFPFLQIQLVPRARLTLRIPVLGVTEFKSIFAGGSLTLYNQGSRPKPAWGGWKPFWHSIKPFAMPVIELQHRNTLLGSVFDSEQRKALKEALDDVTLRRKERMQEKVRNRRETLGRFEPLEMPKLDPRNRVDAIDRLREKMREQYGDR 192          
The following BLAST results are available for this feature:
BLAST of Gchil8160.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISR0_9FLOR2.290e-6448.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBT9_CHOCR1.210e-3437.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:384035..384853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8160.t1Gchil8160.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 384035..384853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8160.t1 ID=Gchil8160.t1|Name=Gchil8160.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=273bp
MSGKYTLTRLQNNGQQHGQDPAGANKQRNQESHSRRRSTTNLLPSLRILL
RPNPGIGLDAYMPFNKQMKLFMSLESYFSGASVVRFGVEPLRFPFLRLQC
SPELRLSVRLPLLHVSEFNQLYMGSQLTLFQNGQSPKIDTTGFGEFWQGI
KKFVQPIGGVQRRASLGELLLNKNQRRVLRDVLDQTRLRRDMKKSDRQRK
HEQFLKDFDGENKLESANDGDVVRDLAEKLKHRYHQRMQLNREMDPPSLS
ESEFGQVGGTEGGSGNNVKDNG*
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