Gchil8134.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8134.t1
Unique NameGchil8134.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length163
Homology
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BLAST of Gchil8134.t1 vs. uniprot
Match: A0A2V3IM46_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM46_9FLOR)

HSP 1 Score: 227 bits (578), Expect = 2.890e-74
Identity = 106/127 (83.46%), Postives = 115/127 (90.55%), Query Frame = 0 
Query:   38 MPSSIKTGYGSDTTPVFKAEAVENREVGDPNYEYTVMRVKVTFRGCAPSNEYILVKSPKSA--CGVEFVPGVAYAVTAKLCRSSTPLPGLPASMETYTATSCSYNKPWNSCPYNDKVFLYYSPVEGC 162
            MPS+I++GY SDTTPVFKAEA+ENR  GDPNYEYTVMRVKVTFRGC P+NEY++VKSPKSA  CGV F PG  YAVTAKLCRSSTP PGLPASMETYTATSCSYNK W+SCPYNDKVFLYYSPV+GC
Sbjct:    1 MPSNIRSGYDSDTTPVFKAEAIENRATGDPNYEYTVMRVKVTFRGCPPANEYVVVKSPKSAASCGVAFEPGNMYAVTAKLCRSSTPPPGLPASMETYTATSCSYNKRWDSCPYNDKVFLYYSPVQGC 127
The following BLAST results are available for this feature:
BLAST of Gchil8134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IM46_9FLOR2.890e-7483.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldGENE3D2.40.50.120coord: 34..162
e-value: 3.2E-8
score: 35.5
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 34..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:109058..109546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8134.t1Gchil8134.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 109058..109546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8134.t1 ID=Gchil8134.t1|Name=Gchil8134.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=163bp
MRFSIFATVLVAAFTIICVHSENVAVQAVSPSKCSCQMPSSIKTGYGSDT
TPVFKAEAVENREVGDPNYEYTVMRVKVTFRGCAPSNEYILVKSPKSACG
VEFVPGVAYAVTAKLCRSSTPLPGLPASMETYTATSCSYNKPWNSCPYND
KVFLYYSPVEGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold