Gchil8132.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8132.t1
Unique NameGchil8132.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length487
Homology
The following BLAST results are available for this feature:
BLAST of Gchil8132.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 158..454
e-value: 5.6E-12
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 270..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:99078..100538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8132.t1Gchil8132.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 99078..100538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8132.t1 ID=Gchil8132.t1|Name=Gchil8132.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=487bp
MPPRLNMDRIDKPLGGPQRPLLKAAMTDPQLQEPENKILPTPHSAKEAGN
RRDSTENPSFSKKELVSQTAKLVVSSLTRILPIREPPKTSSKLWECILVE
LKSNNFELAQKLLWTLYKHPSTSKTAFVNRRRALSILAGLVTVDEWSRKT
PLCSRNSQLISAGIAHGSPDAIAFGSWFYLKKRWSSSFLSFEHMVDLLVG
AARRGHAACQAVLGIMLSTSSKLSGSNRRLLRKSSQPLVLYQQHIHQKLN
SGLHSPANIDGHQKHEIGCINEGKVNRSIQLLKEAASKGYFLALDQIERE
MQKNTSEKTPKQRVHLKAKAQQQCISPHEFFSCVQNAANQQVPYCVVRLA
ELLENGIGCEKSEEDARLWLRTAANLNVPVAMIEIHARTKNENRRVTATL
KRQFLEKDFYKENSLAEERRANATLKQNTFLLRQCEESISRWQAEQEQHK
TVLAFHIISNLSSRISDNMSSAVLHFIFEREKKGWL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf