Gchil8127.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8127.t1
Unique Name	Gchil8127.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	381

Homology

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BLAST of Gchil8127.t1 vs. uniprot
Match: A0A2V3IPP1_9FLOR (MFS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPP1_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 9.410e-118
Identity = 204/382 (53.40%), Postives = 266/382 (69.63%), Query Frame = 0

Query:    1 MGGIFYDRYGPKTTATVGAVGLSATFGALALLSSSVNESSFWLVAALALLMLLFSYMLYSTCMTIAAAVFPERYRGRVVGLCSGLYGASSGMFGAFQAAFFPTLASTPSLLYFMAFSFLVPAVAVFFTFPTHEKYAVEA--DQTNDVTTYQSITYTSVGDDEAITSRLKYAYRIAYLLVISLQASAVADILSVSDRIQKLCAFAVILCIFAFQMLPVGSELVVFPRFGEESGHHSSQTPFSKVVIDFRYLYLCLGFLVLIGGGGIAWLVQASNIISSRFYETATEWQPDRIAQDVRICVIIFSSCNVSARLIFGTFLDTGASASERMMFKYNILHTASLVVSVALAATTMADSFLV--DVGDDWECDSGKFDTLMAHGPFWF 378
            +GG+F++R+G + TA  GA+GL+  F  ++LL+     SSFWLV  L LLM++FSYMLYS+C+T+A AVFPE++RGRVVGLCS LYGAS+G+FG+ QA+FFPTLASTP LL F+AF   +PAV +  +FP  E +AV     Q+    +YQSI      +D  I++RL Y Y IA  LV++LQ SAV +IL+VS  +Q   A AVI CI AFQ+LP  S L VF +  +E    S Q+ F +V +D RYLYL LGFLVLI GGGIA LVQASNI +SRFY+   EWQPD IA++VR+ VIIFS+CNV+ARL+ G+ +D G   SER+M K+NI+HTASLV+++ALAA T+A S  +   VG    C    F +  A    WF
Sbjct:   67 LGGLFHERFGSRCTAATGAIGLTLCFATISLLTKYSITSSFWLVVVLLLLMIMFSYMLYSSCLTMAVAVFPEKFRGRVVGLCSALYGASAGVFGSIQASFFPTLASTPGLLLFVAFFCFIPAVILLLSFPKEETFAVNEWQHQSPRPISYQSILSHPPPEDSVISTRLNYGYLIALCLVVTLQLSAVGEILNVSSTLQLTFACAVITCIAAFQLLPRKSTLRVFAQTEQEVQRESFQS-FEEVALDPRYLYLGLGFLVLISGGGIALLVQASNIANSRFYQNMREWQPDIIAREVRVYVIIFSACNVTARLVVGSVMDFGNQPSERLMLKFNIMHTASLVIALALAAITVATSIQLYFAVGVIGLCHGAFFSSSPALTTLWF 447

The following BLAST results are available for this feature:

BLAST of Gchil8127.t1 vs. uniprot

BLAST of Gchil8127.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IPP1_9FLOR	9.410e-118	53.40	MFS domain-containing protein n=1 Tax=Gracilariops...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 2..264 e-value: 7.1E-12 score: 44.9
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 1..138 e-value: 2.4E-14 score: 55.2
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 2..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..39
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 350..380
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 198..216
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 331..349
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..77
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 99..109
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..171
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 268..330
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 40..58
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 192..197
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 247..267
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 217..246
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 172..191
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 78..98
None	No IPR available	TMHMM	TMhelix		coord: 245..267
None	No IPR available	TMHMM	TMhelix		coord: 329..348
None	No IPR available	TMHMM	TMhelix		coord: 78..100
None	No IPR available	TMHMM	TMhelix		coord: 13..32
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 110..129
None	No IPR available	TMHMM	TMhelix		coord: 200..222
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 1..133 score: 12.377091

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:88297..89555 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8127.t1	Gchil8127.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 88297..89555 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8127.t1 ID=Gchil8127.t1|Name=Gchil8127.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=381bp
MGGIFYDRYGPKTTATVGAVGLSATFGALALLSSSVNESSFWLVAALALL
MLLFSYMLYSTCMTIAAAVFPERYRGRVVGLCSGLYGASSGMFGAFQAAF
FPTLASTPSLLYFMAFSFLVPAVAVFFTFPTHEKYAVEADQTNDVTTYQS
ITYTSVGDDEAITSRLKYAYRIAYLLVISLQASAVADILSVSDRIQKLCA
FAVILCIFAFQMLPVGSELVVFPRFGEESGHHSSQTPFSKVVIDFRYLYL
CLGFLVLIGGGGIAWLVQASNIISSRFYETATEWQPDRIAQDVRICVIIF
SSCNVSARLIFGTFLDTGASASERMMFKYNILHTASLVVSVALAATTMAD
SFLVDVGDDWECDSGKFDTLMAHGPFWFMD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR036259	MFS_trans_sf
IPR020846	MFS_dom