Gchil8063.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8063.t1
Unique NameGchil8063.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length247
Homology
BLAST of Gchil8063.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 270 bits (690), Expect = 9.270e-84
Identity = 130/245 (53.06%), Postives = 178/245 (72.65%), Query Frame = 0
Query:    1 MWSGRLGKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAI 245
            MW G LG+I+A  H I L   ++P   +PY  G K R++   ++ +M KA VIEPA    SEWA+P+VLV K DGS+RFCVDYR+LN++  +D+YP+PRMD+ +D LG+A + +TLD NSGY QI + E  R  T FT+H G ++F RMPFGL NAPATFQ+ + IILSRVKWK  LVYLDDVI+FS T+ EH  H+++V ++L+  G+TLK  KC FF+ +VD   HV++PG+L +AT+ T+A+
Sbjct:  338 MWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREMERQEVERMLKADVIEPAC---SEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSGYWQIPINEEDRDKTTFTSHVGAYRFIRMPFGLCNAPATFQRSLDIILSRVKWKSCLVYLDDVIVFSRTIEEHFGHLQEVFSLLERAGITLKFSKCHFFKDTVDYLGHVIVPGRLAIATKNTDAL 579          
BLAST of Gchil8063.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 229 bits (585), Expect = 9.370e-66
Identity = 116/199 (58.29%), Postives = 145/199 (72.86%), Query Frame = 0
Query:   47 MRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAI 245
            M +A+VIEP     SEWA+P+VLVAK DGS RFCVDYR LNA+  RDSYP+PRMD+C+D LG+A + TTLD NSGY QI +    R  T FT+HEGL+ F RMPFGL+NAPATFQ+ + I LS + WK  LVYLDD+I+FS T TEH+ H+  VL  L   G+TL L+KC FF+ +VD   HV+ PG+L VA + T A+
Sbjct:    1 MLQAKVIEP---TTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAAL 196          
BLAST of Gchil8063.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 221 bits (563), Expect = 2.280e-65
Identity = 107/187 (57.22%), Postives = 137/187 (73.26%), Query Frame = 0
Query:    1 MWSGRLGKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFS 187
            MWSG+LG++++  H IDL    +P    PY  G + R + + ++ +M KAQVIEPA    SEWA+P+VLVAK DGS RFCVDYR LNA+  RDSYP+PRMD+C+D LG+A + TTLD NSGY QI + +  R  T FT+HEGL+ F RMPFGL+NAPATFQ+ + I LS + WK  LVYLDD+I+FS
Sbjct:  348 MWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPAT---SEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRQEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKSCLVYLDDIIVFS 531          
BLAST of Gchil8063.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR)

HSP 1 Score: 203 bits (516), Expect = 4.480e-61
Identity = 100/169 (59.17%), Postives = 124/169 (73.37%), Query Frame = 0
Query:   77 IRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAI 245
            +RFCVDYR LNA+  +DSYP+P+M+DCLD LG+A   TTLD NSGY QI +AE  R  T FT HEG ++F RMPFGL NAPATFQ+ + I+LS  +WK  LVY DD+IIFS  + EH  HV++VL +LQD G++LKL KC FF  SVD   HV+ PG L VA + T+AI
Sbjct:    4 LRFCVDYRRLNAITVKDSYPLPKMEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAI 172          
BLAST of Gchil8063.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D)

HSP 1 Score: 216 bits (550), Expect = 6.410e-61
Identity = 111/230 (48.26%), Postives = 150/230 (65.22%), Query Frame = 0
Query:    1 MWSGRLGKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVV 230
            +W G LG I A+ H I       P    PY  G   R  +  ++ +M++  VIEPA   +  WA+P+VL+ K DGS+RFCVDYR LNAV  +DSY +PR+DD LD LG A   +TLDANSGY QI +    R  T FTTH GL++F R+PFGL +APATFQ+ + +ILS V+++ AL YLDD+I+FS T  +H+R +  VL++++D GVTLKL KC F    V    ++V
Sbjct:  585 LWDGHLGNIDAVQHHIPTTGP--PLATQPYRVGPASRDSIDAELQRMKEMDVIEPA---EGPWASPVVLIPKPDGSVRFCVDYRRLNAVTTKDSYALPRVDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVRFRCALTYLDDIIVFSFTFEQHMRDLDLVLSLVRDAGVTLKLVKCRFAAPEVPYLGYIV 809          
BLAST of Gchil8063.t1 vs. uniprot
Match: A0A815E5W6_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815E5W6_9BILA)

HSP 1 Score: 200 bits (508), Expect = 1.670e-60
Identity = 98/235 (41.70%), Postives = 151/235 (64.26%), Query Frame = 0
Query:   12 ITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAIS 246
            + H I L  D++P    PY      R+++   + ++++  +IEP   ++S WA+P++L  KKDGS+RFCVDYR+LN+   RD+YPIPR+DD LD L EA   +TLD  SGY Q+ + + S+  T F TH+GL++F+ MP+GL NA ATFQ++M I+L+ +KW+  LVY+DD++I+S T  +HL  +K V   L++  +TLK  KC F +  +    H++    +K     T A+S
Sbjct:    2 LRHQIKLMPDSKPYNSPPYRYAPAKRQVIEQNLKEIKEEGIIEP---SKSPWASPVILAPKKDGSMRFCVDYRKLNSTTIRDAYPIPRIDDTLDALQEAKFVSTLDLRSGYCQVEMDKESKEKTAFITHKGLYEFNVMPYGLTNATATFQRLMDIVLAGLKWQSCLVYIDDIVIYSPTFEQHLIDLKNVFQALREANLTLKASKCCFCRREMKYLGHIITQDGIKPDPTLTKAVS 233          
BLAST of Gchil8063.t1 vs. uniprot
Match: A0A164HM17_9CRUS (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164HM17_9CRUS)

HSP 1 Score: 202 bits (513), Expect = 7.120e-60
Identity = 102/226 (45.13%), Postives = 145/226 (64.16%), Query Frame = 0
Query:    5 RLGKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVV 230
            ++G    + H+I    +A P F  PY      R ++ +++ +M +  +I+P   +QS W++P+VLV KK G  RFCVDYR LNAV KRD YP+PRMDD  D L  A + + LD  SGY Q+ +A++ R  T F T +GLF+F R+PFGL NAPATFQ++M  +L R+KWK  LVYLDD+++F  T  EH   +++VL  L+   +TL LRKC F  + V +  HV+
Sbjct:   13 KIGCTGNVEHTIQT-GEANPVFGQPYRVSKFERDLINEKVGEMLRDGIIQP---SQSPWSSPVVLVRKKSGDHRFCVDYRRLNAVTKRDVYPLPRMDDVFDCLAGATIFSFLDLASGYRQVSVADSDRYKTAFVTPDGLFEFKRLPFGLSNAPATFQRLMDRVLGRLKWKMCLVYLDDILVFGKTFGEHQERLQQVLVALEKANLTLNLRKCVFGTSRVKHLGHVI 234          
BLAST of Gchil8063.t1 vs. uniprot
Match: A0A816E766_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816E766_9BILA)

HSP 1 Score: 208 bits (529), Expect = 1.890e-59
Identity = 104/240 (43.33%), Postives = 157/240 (65.42%), Query Frame = 0
Query:    7 GKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAIS 246
            G+ + + H I L  +++P    PY      R+I+   + +M++  +IEP   ++S WA+P+VL  KKDGS+RFCVDYR+LN+V  RD+YPIPR+DD LD L EA   +TLD  SGY Q+ + ++S+  T F TH+GL++F+ MPFGL NAPATFQ++M I+L+ +KW+  LVY+DD++I+S    +HL  ++KV   L++  +TLK  KC F +  +    HVV    +K     T A++
Sbjct:  293 GRTKMLQHQIKLLPESKPCNSPPYRYAPAKRQIIEQNLKEMKEEGIIEP---SKSPWASPVVLAPKKDGSMRFCVDYRKLNSVTTRDAYPIPRIDDTLDSLQEAKFVSTLDLRSGYWQVEMDKDSKEKTAFITHKGLYEFNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDIVIYSPNFEQHLLDLEKVFLALREANLTLKASKCCFCRKEMKYLGHVVTQNGIKPDPTLTKAVT 529          
BLAST of Gchil8063.t1 vs. uniprot
Match: A0A820Z2X7_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820Z2X7_9BILA)

HSP 1 Score: 206 bits (523), Expect = 3.490e-59
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 0
Query:    7 GKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLK 236
            G+ + + H I+L  DA+P    P+      ++++   + +M    +I P   + S WA+P++LV KKDGS+RFC+DYR+LNAV  RD+YP+PR+DD LD L +A   +TLD  SGY Q+ + ++SR  T F TH+GLF+F+ MPFGL NAPATFQ++M I+L+ +KW+  LVY+DDV+IFS T  +H+  ++KV   LQ   +TLK  KC F +  +    H++    +K
Sbjct:  274 GRTKKLQHQINLVSDAQPFNSPPFRYAPTRKQVIEQNLNEMLDQGIISP---STSPWASPVILVPKKDGSLRFCIDYRKLNAVTIRDAYPLPRIDDTLDSLQQAKFVSTLDLRSGYWQVEMNKDSRQKTAFVTHKGLFEFNVMPFGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDVVIFSPTFEQHMTDLEKVFQALQSANLTLKASKCQFCRREMRYLGHIITQNGIK 500          
BLAST of Gchil8063.t1 vs. uniprot
Match: A0A820F670_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820F670_9BILA)

HSP 1 Score: 202 bits (514), Expect = 3.520e-59
Identity = 99/240 (41.25%), Postives = 155/240 (64.58%), Query Frame = 0
Query:    7 GKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKAQVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRMDDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMPFGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKVLTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAIS 246
            G+ + I H + L  +++P    PY      R+++ + + +M++  +I+P   ++S WA+P+VL  KKDG+IRFCVDYR+LN++  RD+YPIPR+DD L+ L EA   + LD  SGY Q+ +   S+  T F TH+GL++F+ MP+GL NAPATFQ++M I+L+ +KW+  LVY+DD++I+S T  +HL  +K V   L++  +TLK  KC F +  +    H+V    +K     T A+S
Sbjct:  196 GRTKMIRHHVKLIPESKPYNSPPYRYSPAKRQVIEENIQEMKEEGIIKP---SKSPWASPVVLAPKKDGTIRFCVDYRKLNSITTRDAYPIPRIDDTLESLQEAKFLSALDLRSGYWQLEMDNESKEKTAFVTHKGLYEFNVMPYGLTNAPATFQRLMDIVLAGLKWQCCLVYIDDIVIYSPTFEQHLIDLKNVFLALREANLTLKALKCCFCRKEMKYLGHIVTQDGIKPDPTLTKAVS 432          
The following BLAST results are available for this feature:
BLAST of Gchil8063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D3E389.270e-8453.06uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1E14079.370e-6658.29uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
UPI001E1DB02D2.280e-6557.22uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
R7QRD9_CHOCR4.480e-6159.17Retrotransposon protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D2C1D6.410e-6148.26uncharacterized protein LOC123544039 n=1 Tax=Merce... [more]
A0A815E5W6_9BILA1.670e-6041.70Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A164HM17_9CRUS7.120e-6045.13Reverse transcriptase domain-containing protein (F... [more]
A0A816E766_9BILA1.890e-5943.33Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]
A0A820Z2X7_9BILA3.490e-5943.91Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A820F670_9BILA3.520e-5941.25Hypothetical protein (Fragment) n=1 Tax=Adineta st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 12..155
e-value: 1.2E-70
score: 239.1
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 13..229
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 13..229
NoneNo IPR availableCDDcd01647RT_LTRcoord: 52..224
e-value: 1.34572E-75
score: 225.167
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 71..220
e-value: 9.2E-23
score: 80.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 51..231
score: 11.765976
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 95..230
e-value: 1.2E-70
score: 239.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 3..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004435_piloncontigtig00004435_pilon:909668..910408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8063.t1Gchil8063.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004435_pilon 909668..910408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8063.t1 ID=Gchil8063.t1|Name=Gchil8063.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=247bp
MWSGRLGKIRAITHSIDLQDDARPEFQNPYPTGLKGRKIVTDQMVKMRKA
QVIEPAPPNQSEWATPLVLVAKKDGSIRFCVDYRELNAVIKRDSYPIPRM
DDCLDFLGEAVVCTTLDANSGYLQILLAENSRGLTNFTTHEGLFKFSRMP
FGLKNAPATFQQVMHIILSRVKWKFALVYLDDVIIFSLTVTEHLRHVKKV
LTILQDPGVTLKLRKCAFFQASVDNHAHVVLPGKLKVATRTTNAIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf