Gchil8062.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8062.t1
Unique NameGchil8062.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 4.350e-21
Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALEQDITERL 129
            + D+S RLARWRLRL+EYDYE+ YRPG+K Q  D +SR+ T+G D  P+ D +P     +        DN       +    Q E+ +    A+ +GTP   FD DR+G + R SPL+G L++ +  RL
Sbjct:  215 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRTDGGDTEPVDDEVPCFAVQYEEGSEALLDN-------EFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLDGTLQRVVPTRL 336          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7Q7I0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7I0_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 7.110e-19
Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDVPE---AQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALEQDITERL 129
            + D+S RLARW LRL+EYDYE+ Y PG+K Q  D +SR+ T+G D  P+ D +P     +        DN        V E    Q E+ +    A+ + TP   FD DR+G + R SPL+G L+  +  RL
Sbjct:  147 LADSSGRLARWLLRLAEYDYEVQYGPGVKHQLADGVSRLRTDGGDTEPVDDEVPCFAVQYDDGSKALLDNERDAASISVEEFIREQAEDAFCRFAAETVETPNSKFDIDRYGFLVRTSPLDGTLQCVVPTRL 278          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 93.2 bits (230), Expect = 1.530e-18
Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDV--------------PEA--------------QVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALEQDITERL 129
            + D+S RLARWRLRL+EY+YE+ YRPG+K Q  D +SR+ T+G D TP+ D +   F     +G     +++GKV  D+              PE               Q ++ +    A  +G P   FD DR+G + R+SPL+G L++ +  RL
Sbjct:  280 LADSSGRLARWRLRLAEYNYEVQYRPGVKHQLADGVSRLRTDGGDTTPVDDEVSC-FVVQSQEGSA---SLLGKVHWDLTQDRPDGFYVLAVTPEERDVSSISVANFLREQADDAFCRAAADTVGEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRL 432          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 89.7 bits (221), Expect = 2.400e-17
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALEQDITERL 129
            + D+S RLARWRLRL+EYDYE+ YRPG+K Q  D +SR+  +G D  P+ D                          +    Q E+ +    A+ +GTP   FD DR+G + R SPL G L++ +  RL
Sbjct:  430 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRIDGGDTEPVDD-------------------------EEFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLGGTLQRVVPTRL 533          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 88.6 bits (218), Expect = 5.700e-17
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIP---------------------TPF----TDHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALEQDITERL 129
            + D+S RLARWRLRL+EYDYE+ YRPGIK Q  D +SR+  +G    P+ D +P                     TP      +H      E  ++      +    Q E+ +    A+ +G P   +D +R+G + R+SPL+G L++ + +RL
Sbjct:  146 LADSSGRLARWRLRLAEYDYEVKYRPGIKHQLADGVSRLRVDGATSEPVDDEVPCFAVQWREEEQNPRQGTVHWETPVDPGRAEHAFTVIPEERDVSSVTVEEFLREQAEDPFCTAAAETVGNPDSRYDVERYGFVVRKSPLDGTLQRVVPKRL 299          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 75.9 bits (185), Expect = 1.470e-12
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNGALE 122
            + D   RLAR RLRLSEYD+ + +R GIK Q  D L R+ T G D + L D IP                I+  +Q D+   Q  + Y     + +G  G  F+ ++ GL+CRR+PL+G+++
Sbjct:  236 LADAKGRLARCRLRLSEYDFIVEHRAGIKHQAADALWRLETTGLDTSTLRDEIPC--------------YILPVMQDDLIREQKTDSYCKAMMEEVGKSGTQFEVNQHGLLCRRAPLDGSIQ 343          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 68.6 bits (166), Expect = 4.750e-10
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFTDHGPQGYTETDNIMGKVQSDVPE 81
            + D+S RLARWRLRL+EYDYE+ YRPG+K Q  D  SR+ T+  D  P+ D +P     +        DN+      D P+
Sbjct:  349 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGESRLRTDREDTEPVDDEVPCFAVQYDEGSEALLDNVHWDPPQDRPD 429          
BLAST of Gchil8062.t1 vs. uniprot
Match: R7QNI8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNI8_CHOCR)

HSP 1 Score: 60.1 bits (144), Expect = 3.940e-7
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
Query:    1 MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLGDLIPTPFT---DHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPGCLFDYDRFGLMCRRSPLNG 119
            + D S RLARWRLRL+EYD ++TY  GIK    D LSRI + G    P+ + IP       D  PQ + ET +   +V S + + +   E               F  ++  L+CR++ L+G
Sbjct:  214 LADASGRLARWRLRLAEYDSDVTYVKGIKNCLADALSRIPSTGGTTVPIDEEIPCYSVMNFDDEPQHHEETYDPTDEVTSRLEKGEGFAELRRSR----------FFVNQERLVCRKAHLDG 325          
The following BLAST results are available for this feature:
BLAST of Gchil8062.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
R7QN04_CHOCR4.350e-2140.31Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q7I0_CHOCR7.110e-1938.64Integrase catalytic domain-containing protein n=1 ... [more]
R7QLF2_CHOCR1.530e-1835.03Integrase catalytic domain-containing protein n=1 ... [more]
R7QMC5_CHOCR2.400e-1737.21Integrase catalytic domain-containing protein n=1 ... [more]
R7QJ93_CHOCR5.700e-1732.47Integrase catalytic domain-containing protein n=3 ... [more]
R7QR94_CHOCR1.470e-1236.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QKK5_CHOCR4.750e-1041.98Integrase catalytic domain-containing protein n=1 ... [more]
R7QNI8_CHOCR3.940e-734.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004435_piloncontigtig00004435_pilon:907715..909184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8062.t1Gchil8062.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004435_pilon 907715..909184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8062.t1 ID=Gchil8062.t1|Name=Gchil8062.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MTDTSSRLARWRLRLSEYDYEITYRPGIKQQEVDDLSRIITNGNDDTPLG
DLIPTPFTDHGPQGYTETDNIMGKVQSDVPEAQVENEYSNKTAQLLGTPG
CLFDYDRFGLMCRRSPLNGALEQDITERLTLTEAKRNSRRRIDHIIQSAR
AVLTDAQRHYKFNFNKAVWNTPTFEKKDLVYLDRSPKDSDELEDTTRKL*
back to top